BLASTX nr result

ID: Coptis24_contig00010408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010408
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612597.1| hypothetical protein MTR_5g026790 [Medicago ...    64   1e-08
ref|XP_002326582.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_004161008.1| PREDICTED: uncharacterized protein LOC101224...    55   5e-06
ref|XP_004144465.1| PREDICTED: uncharacterized protein LOC101212...    55   5e-06

>ref|XP_003612597.1| hypothetical protein MTR_5g026790 [Medicago truncatula]
           gi|355513932|gb|AES95555.1| hypothetical protein
           MTR_5g026790 [Medicago truncatula]
          Length = 187

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = -3

Query: 203 KIKPSIDLYQSEIREEFEASHS*LSKRFKVHSQACQQMMDDVDKDYKRASYLIIDNVEAM 24
           ++K  ID   SEI ++ EASHS L KRFK+ SQ CQQ MD+ +KDYK+ S  I ++ EAM
Sbjct: 82  ELKRRIDRSHSEILKDLEASHSRLHKRFKMQSQGCQQAMDEAEKDYKKLSERITESREAM 141


>ref|XP_002326582.1| predicted protein [Populus trichocarpa] gi|222833904|gb|EEE72381.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = -3

Query: 188 IDLYQSEIREEFEASHS*LSKRFKVHSQACQQMMDDVDKDYKRASYLIIDNVEAM--TFA 15
           ID   SEI ++ EASHS L K FK+ SQ CQQMMD+ +KD+K+ +  + +  EAM  T+ 
Sbjct: 77  IDRSHSEIIKDLEASHSRLHKHFKIQSQTCQQMMDESEKDFKKMTERVTETTEAMKETYT 136

Query: 14  KF 9
           +F
Sbjct: 137 EF 138


>ref|XP_004161008.1| PREDICTED: uncharacterized protein LOC101224779 [Cucumis sativus]
          Length = 157

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/59 (44%), Positives = 41/59 (69%)
 Frame = -3

Query: 200 IKPSIDLYQSEIREEFEASHS*LSKRFKVHSQACQQMMDDVDKDYKRASYLIIDNVEAM 24
           +K  ID   S+I ++ ++S+S L KRFK+  Q CQ+MMD+ +K+YK+ S  I ++ EAM
Sbjct: 53  LKRHIDHSHSQIVKDLDSSNSRLQKRFKIQGQTCQKMMDEAEKEYKKMSQRIHESQEAM 111


>ref|XP_004144465.1| PREDICTED: uncharacterized protein LOC101212399 [Cucumis sativus]
          Length = 196

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/59 (44%), Positives = 41/59 (69%)
 Frame = -3

Query: 200 IKPSIDLYQSEIREEFEASHS*LSKRFKVHSQACQQMMDDVDKDYKRASYLIIDNVEAM 24
           +K  ID   S+I ++ ++S+S L KRFK+  Q CQ+MMD+ +K+YK+ S  I ++ EAM
Sbjct: 92  LKRHIDHSHSQIVKDLDSSNSRLQKRFKIQGQTCQKMMDEAEKEYKKMSQRIHESQEAM 150