BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010399
         (4334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263027.2| PREDICTED: uncharacterized protein LOC100265...  1159   0.0  
emb|CAN82215.1| hypothetical protein VITISV_020421 [Vitis vinifera]  1150   0.0  
ref|XP_003547135.1| PREDICTED: uncharacterized protein LOC100805...  1059   0.0  
ref|XP_003593498.1| Helicase-like transcription factor [Medicago...  1038   0.0  
ref|XP_002317230.1| chromatin remodeling complex subunit [Populu...  1035   0.0  

>ref|XP_002263027.2| PREDICTED: uncharacterized protein LOC100265351 [Vitis vinifera]
          Length = 1430

 Score = 1159 bits (2998), Expect = 0.0
 Identities = 645/998 (64%), Positives = 725/998 (72%), Gaps = 46/998 (4%)
 Frame = -2

Query: 3244 ISQGSSFKHEASSHCLPTGIGSSRHASKN---LLPGFPSFIPMKKELVCVDDDRMGEVHA 3074
            I Q +    EA +     G+ +   A KN   +L  FP FI  KK L    D+      A
Sbjct: 442  ICQPNEVVDEAVNDRFSLGVDARVFADKNSRQMLSCFPPFISSKKNLFDAKDENEDLYLA 501

Query: 3073 SK----------SACFRSATLEGYCSDEAPSHSVPDTQSVFLPGPNVP-IKEEKKTEVV- 2930
            SK              RS +  G   D      +P  +   +    +  IK+EK+ +++ 
Sbjct: 502  SKRPRHCQVIGDELSGRSQSGGGPL-DTVSEQLIPSVKQSTVSNKQLDYIKDEKEGKLIQ 560

Query: 2929 PHRYTDYHVKVNGVIKGNHSVD-RSNVDDEADVCILEDISDPRTQPLGRVHEKSPITAQR 2753
            P     Y  KV+     ++S+D RS++DD+ D+CILEDIS+P       +  KS ++ QR
Sbjct: 561  PKSMGSYLSKVSPESIQSNSLDHRSHIDDDTDICILEDISEPVRSNSSLLLGKSLVSTQR 620

Query: 2752 VVYDPLYHIGIGNTRVKAFDERITLRVALQDLSQPKSESSPPDGTLAVSLLRHQRIALSW 2573
               D L++ G+   R +  DER+  RVALQDLSQPKSE+SPPDG L V LLRHQRIALSW
Sbjct: 621  YS-DSLHNTGVVGMRNRTNDERLIFRVALQDLSQPKSEASPPDGVLTVPLLRHQRIALSW 679

Query: 2572 MVQKETASLHCSGGILADDQGLGKTISTIALILKERPPSSKATSVTVKQNE--------- 2420
            MVQKETASLHCSGGILADDQGLGKT+STIALILKERP SS+A    +KQ+E         
Sbjct: 680  MVQKETASLHCSGGILADDQGLGKTVSTIALILKERPTSSRACQEDMKQSELETLNLDED 739

Query: 2419 ----PKAXXXXXXXXXXXXXXNGMKIKSENASMLAKGRPAAGTLVVCPTSVLRQWSDELH 2252
                P+               +G  +K ENA +  KGRPAAGTLVVCPTSVLRQW++EL 
Sbjct: 740  DDKVPELDGTKQAADSCEVMSHGSSMKKENAFVQGKGRPAAGTLVVCPTSVLRQWAEELR 799

Query: 2251 SKVSKEANLSVLVYHGSNRTKDPFELAKYDVVVTTYSIVSMEVPKQPLVDKDDDEKGQPE 2072
            SKV+ +ANLSVLVYHGSNRTKDP ELA+YDVV+TTYSIVSMEVPKQPLVDKDD+EK +PE
Sbjct: 800  SKVTSKANLSVLVYHGSNRTKDPCELARYDVVLTTYSIVSMEVPKQPLVDKDDEEKVKPE 859

Query: 2071 GHGLESMEFSYNKKRKYPPSADXXXXXXXXXXXXXXXXSITRPLARVGWFRVVLDEAQSI 1892
             H +   E S NKKRKYPPS+D                S+ RPLARVGWFRVVLDEAQSI
Sbjct: 860  AH-VSPTELSSNKKRKYPPSSDKKCLKDKKAMDGALLESVARPLARVGWFRVVLDEAQSI 918

Query: 1891 KNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAAYKSFCSMIKVPI 1712
            KNHRTQVARACWGLRAKRRWCLSGTPIQNA+DDLYSYFRFLRYDPYA YKSFCS IKVPI
Sbjct: 919  KNHRTQVARACWGLRAKRRWCLSGTPIQNAVDDLYSYFRFLRYDPYAVYKSFCSTIKVPI 978

Query: 1711 SRNPTNGYKKLQAVLKTIMLRRTKGSLLDGEPIINLPPKSVELKRVDFSMEERGFYSKLE 1532
            +RNPTNGY+KLQAVLKTIMLRRTKG+LLDGEPII LPPKSVELK+VDFS EER FYS+LE
Sbjct: 979  TRNPTNGYRKLQAVLKTIMLRRTKGTLLDGEPIITLPPKSVELKKVDFSKEERDFYSRLE 1038

Query: 1531 ADSRDQFKVYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGYDSNSVLRSSVEKAKELA 1352
            ADSR QF+VYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGY+SNSV RSSVE AK+L+
Sbjct: 1039 ADSRAQFEVYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGYNSNSVWRSSVEMAKKLS 1098

Query: 1351 GEKQLELLNCLEARSDICGICNDPPEDAVVTICGHVFCNQCILEHLTGDENLCPAAQCKV 1172
             EKQ+ LLNCLE    ICGICNDPPEDAVV+ICGHVFCNQCI EHLT DEN CP+  CKV
Sbjct: 1099 REKQIYLLNCLEGSLAICGICNDPPEDAVVSICGHVFCNQCICEHLTSDENQCPSTNCKV 1158

Query: 1171 HLNITSVFSRNALRSSL------------FGQTNLENHASQPDETLVACSKGPSDSSKIK 1028
             LN++SVFS+  L+SSL             G   +E H   P+  L        DSSKI+
Sbjct: 1159 QLNVSSVFSKATLKSSLSDLPVQDISHHCSGSELVEAHDPCPESRLY-------DSSKIR 1211

Query: 1027 AALEVLQSLSKPWHYTSKDSTISSINEVGPCPVNASDPHIEDRRHDIETGSN-----DSI 863
            AALEVLQSLSKP   T  +S++ S NE      N SD H E    +     N      SI
Sbjct: 1212 AALEVLQSLSKPRDCTLGNSSLKSSNETTSGLENLSDSHSEGLLKETCDEKNVVLDKGSI 1271

Query: 862  VKVSEKAIVFSQWTRMLDLLEVHLKTSSIQYRRLDGTMSVVARDKAVKDFNAIPEVTVMI 683
              V EKAIVFSQWTRMLDLLE  LK SSIQYRRLDGTMSVVARDKAVKDFN +PEV+VMI
Sbjct: 1272 TVVGEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMI 1331

Query: 682  MSLKAASLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDR 503
            MSLKAASLGLNMVAACHV+LLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDR
Sbjct: 1332 MSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDR 1391

Query: 502  ILALQQKKREMVASAFGEDETGSRQTRLTVDDLKYLFM 389
            ILALQQKKREMVASAFGEDETGSRQTRLTVDDLKYLFM
Sbjct: 1392 ILALQQKKREMVASAFGEDETGSRQTRLTVDDLKYLFM 1429



 Score =  114 bits (286), Expect = 2e-22
 Identities = 122/446 (27%), Positives = 197/446 (44%), Gaps = 26/446 (5%)
 Frame = -2

Query: 4333 ILSEDDSSNPHLLSRSEDLSCNNLSQGGVAPGEVNYWSQSGLQSGVHESEEAPPTECGLL 4154
            IL ED      + S  ED    N+SQ   AP   ++   +    G  E   A       L
Sbjct: 30   ILGEDPDP---MQSSPEDFPFKNVSQDESAPDFGHH--DNSQPHGFQELGRASSLGDEFL 84

Query: 4153 ESTQWSHSGNMILSNPMAQTGSEEMFEFPELSGKIFDEGEVDSV--SSPLRTCSVSLTDW 3980
                  HS N   S+ + + GS+ +FE       I +  ++ S    SP+R+ S SL DW
Sbjct: 85   R-----HSFNSEASHSITR-GSDGLFE--SAGNSIIECAKLPSAHAGSPVRSGSGSLNDW 136

Query: 3979 STMSCVENDTCSSRERDGVGMNAPLYN-FDRTFTPTHVPSCNATFNFASGDSSGSTDHVN 3803
              +S V       +ER GV  +A  YN  D       +P+C+  F+FA+G+S+ ++D+ N
Sbjct: 137  --ISHVSGQETCCKERSGVSQDALSYNRVDSKEIQYEIPNCSTAFSFAAGNSNYASDYTN 194

Query: 3802 LVDLKN---EEENEFRHTGGVSHSQCASHFPVVEESDLAFRSHTDLFGNGFENPGALERS 3632
             +DL +   + E +F+H G   HS+ AS+  V E SD+   S+            A+E+S
Sbjct: 195  GLDLNHLNGDTEAQFKHMGVEIHSEYASNSMVTENSDIGLGSYEP----------AIEKS 244

Query: 3631 LPTL---------NAEIAFIDSETCLVHPHLTEINGSQVSDIHFEGNEIYSEQSSC--GR 3485
               L         +  I+  D++      + TE +  Q+ D+ +E +E YS    C    
Sbjct: 245  TGDLVTGGKYSCTSMTISLRDADISSHDVNHTESSICQIPDVVYENSEDYSAVQYCLSAD 304

Query: 3484 STTFSDGTVTDSSKKTPHYFSFPFMEIKEENMTCQEDLVEDQILSSQTICTTTNTYLEEE 3305
             + FSD     SS+  P  F   FM   EE +   +D  E++ LS++  C  +   L ++
Sbjct: 305  GSLFSD----PSSQYMPDCFDLQFMPSSEEMLINMKD--ENEELSAENTCLNSKMNLSQD 358

Query: 3304 AKPQISLSTKASVVDCSNRSISQGSSFKHEASSHCLPTGIGSSRHA---------SKNLL 3152
            A+    +         +N S  +G +F HE S++  PT   SS +A         S  L 
Sbjct: 359  ARASSFVQK-----GLNNYSDVKGLNFNHEGSNYVSPTSGNSSSNAGYGSNDDIRSIQLS 413

Query: 3151 PGFPSFIPMKKELVCVDDDRMGEVHA 3074
                S++  K+  +C+ D+R  E+ A
Sbjct: 414  TCSQSYMSNKRRAICIKDERKDELVA 439


>emb|CAN82215.1| hypothetical protein VITISV_020421 [Vitis vinifera]
          Length = 1435

 Score = 1150 bits (2975), Expect = 0.0
 Identities = 730/1439 (50%), Positives = 870/1439 (60%), Gaps = 124/1439 (8%)
 Frame = -2

Query: 4333 ILSEDDSSNPHLLSRSEDLSCNNLSQGGVAPGEVNYWSQSGLQSGVHESEEAPPTECGLL 4154
            IL ED      + S  ED    N+SQ   AP   ++   +    G  E   A       L
Sbjct: 34   ILGEDPDP---MQSSPEDFPFKNVSQDESAPDFGHH--DNSQPHGFQELGRASSLGDEFL 88

Query: 4153 ESTQWSHSGNMILSNPMAQTGSEEMFEFPELSGKIFDEGEVDSV--SSPLRTCSVSLTDW 3980
                  HS N   S+ + + GS+ +FE       I +  ++ S    SP+R+ S SL DW
Sbjct: 89   R-----HSFNSEASHSITR-GSDGLFE--SAGNSIIECAKLPSAHAGSPVRSGSGSLNDW 140

Query: 3979 STMSCVENDTCSSRERDGVGMNAPLYN-FDRTFTPTHVPSCNATFNFASGDSSGSTDHVN 3803
              +S V       +ER GV  +A LYN  D       +P+C+  F+FA+G+S+ ++D+ N
Sbjct: 141  --ISHVSGQETCCKERSGVSQDALLYNRVDSKEIQYEIPNCSTAFSFAAGNSNYASDYTN 198

Query: 3802 LVDLKN---EEENEFRHTGGVSHSQCASHFPVVEESDLAFRSHTDLFGNGFENPGALERS 3632
             +DL +   + E +F+H G   HS+ AS+  V E SD+   S+            A+E+S
Sbjct: 199  GLDLNHLNGDTEAQFKHMGVEIHSEYASNSMVTENSDIGLGSYEP----------AIEKS 248

Query: 3631 LPTL---------NAEIAFIDSETCLVHPHLTEINGSQVSDIHFEGNEIYSEQSSC--GR 3485
               L         +  I+  D++      + TE +  Q+ D+ +E +E YS    C    
Sbjct: 249  TGDLVTGGKYSCTSMTISLRDADISSHDVNHTESSICQIPDVVYENSEDYSAVQYCLSAD 308

Query: 3484 STTFSDGTVTDSSKKTPHYFSFPFM--------EIKEENM------TC---QEDLVEDQI 3356
             + FSD     SS+  P  F   FM         +K+EN       TC   Q +L +D  
Sbjct: 309  GSLFSD----PSSQYMPDCFDLQFMPSSEEMLINMKDENEELSAENTCLNSQMNLSQDAR 364

Query: 3355 LSS-----------------------QTICTTTNT-----YLEEEAKPQISLSTKASVVD 3260
             SS                           T+ N+     Y   +    I LST +    
Sbjct: 365  ASSFVQKGLNNYSDVKGLNFNHEGSNYVSPTSGNSSSNAGYGSNDDIRSIQLSTCSQSYM 424

Query: 3259 CSNR----------------SISQGSSFKHEASSHCLPTGIGSSRHASKN---LLPGFPS 3137
             + R                 I Q +    EA +     G+ +   A KN   +L  FP 
Sbjct: 425  SNKRRAICIKDERKDELVAPGICQPNEVVDEAVNDRFSLGVDARVFADKNSRQMLSCFPP 484

Query: 3136 FIPMKKELVCVDDDRMGEVHASK----------SACFRSATLEGYCSDEAPSHSVPDTQS 2987
            FI  KK L    D+      ASK              RS +  G   D      +P  + 
Sbjct: 485  FISSKKNLFDAKDENEDLYLASKRPRHCQVIGDELSGRSQSGGGPL-DTVSEQLIPSVKQ 543

Query: 2986 VFLPGPNVP-IKEEKKTEVV-PHRYTDYHVKVNGVIKGNHSVD-RSNVDDEADVCILEDI 2816
              +    +  IK+EK+ +++ P     Y  KV+     ++S+D RS++DD+ D+CILEDI
Sbjct: 544  STVSNKQLDYIKDEKEGKLIQPKSMGSYLSKVSPESIQSNSLDHRSHIDDDTDICILEDI 603

Query: 2815 SDPRTQPLGRVHEKSPITAQRVVYDPLYHIGIGNTRVKAFDERITLRVALQDLSQPKSES 2636
            S+P       +  KS ++ QR   D L++ G+   R +  DER+  RVALQDLSQPKSE+
Sbjct: 604  SEPVRSNSSLLLGKSLVSTQRYS-DSLHNTGVVGMRNRTNDERLIFRVALQDLSQPKSEA 662

Query: 2635 SPPDGTLAVSLLRHQRIALSWMVQKETASLHCSGGILADDQGLGKTISTIALILKERPPS 2456
            SPPDG L V LLRH                          QGLGKT+STIALILKERP S
Sbjct: 663  SPPDGVLTVPLLRH--------------------------QGLGKTVSTIALILKERPTS 696

Query: 2455 SKATSVTVKQNE-------------PKAXXXXXXXXXXXXXXNGMKIKSENASMLAKGRP 2315
            S+A    +KQ+E             P+               +G  +K ENA +  KGRP
Sbjct: 697  SRACQEDMKQSELETLNLDEDDDKVPELDGTKQAADSCEVMSHGSSMKKENAFVQGKGRP 756

Query: 2314 AAGTLVVCPTSVLRQWSDELHSKVSKEANLSVLVYHGSNRTKDPFELAKYDVVVTTYSIV 2135
            AAGTLVVCPTSVLRQW++EL SKV+ +ANLSVLVYHGSNRTKDP ELA+YDVV+TTYSIV
Sbjct: 757  AAGTLVVCPTSVLRQWAEELRSKVTSKANLSVLVYHGSNRTKDPCELARYDVVLTTYSIV 816

Query: 2134 SMEVPKQPLVDKDDDEKGQPEGHGLESMEFSYNKKRKYPPSADXXXXXXXXXXXXXXXXS 1955
            SMEVPKQPLVDKDD+EK +PE H +   E S NKKRKYPPS+D                S
Sbjct: 817  SMEVPKQPLVDKDDEEKVKPEAH-VSPTELSSNKKRKYPPSSDKKCLKDKKAMDGALLES 875

Query: 1954 ITRPLARVGWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFR 1775
            + RPLARVGWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNA+DDLYSYFR
Sbjct: 876  VARPLARVGWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAVDDLYSYFR 935

Query: 1774 FLRYDPYAAYKSFCSMIKVPISRNPTNGYKKLQAVLKTIMLRRTKGSLLDGEPIINLPPK 1595
            FLRYDPYA YKSFCS IKVPI+RNPTNGY+KLQAVLKTIMLRRTKG+LLDGEPII LPPK
Sbjct: 936  FLRYDPYAVYKSFCSTIKVPITRNPTNGYRKLQAVLKTIMLRRTKGTLLDGEPIITLPPK 995

Query: 1594 SVELKRVDFSMEERGFYSKLEADSRDQFKVYAAAGTVKQNYVNILLMLLRLRQACDHPLL 1415
            SVELK+VDFS EER FYS+LEADSR QF+VYAAAGTVKQNYVNILLMLLRLRQACDHPLL
Sbjct: 996  SVELKKVDFSKEERDFYSRLEADSRAQFEVYAAAGTVKQNYVNILLMLLRLRQACDHPLL 1055

Query: 1414 VKGYDSNSVLRSSVEKAKELAGEKQLELLNCLEARSDICGICNDPPEDAVVTICGHVFCN 1235
            VKGY+SNSV RSSVE AK+L+ EKQ+ LLNCLE    ICGICNDPPEDAVV+ICGHVFCN
Sbjct: 1056 VKGYNSNSVWRSSVEMAKKLSREKQIYLLNCLEGSLAICGICNDPPEDAVVSICGHVFCN 1115

Query: 1234 QCILEHLTGDENLCPAAQCKVHLNITSVFSRNALRSSL------------FGQTNLENHA 1091
            QCI EHLT DEN CP+  CKV LN++SVFS+  L+SSL             G   +E H 
Sbjct: 1116 QCICEHLTSDENQCPSTNCKVQLNVSSVFSKATLKSSLSDLPVQDISHHCSGSELVEAHD 1175

Query: 1090 SQPDETLVACSKGPSDSSKIKAALEVLQSLSKPWHYTSKDSTISSINEVGPCPVNASDPH 911
              P+  L        DSSKI+AALEVLQSLSKP   T  +S++ S NE      N SD H
Sbjct: 1176 PCPESRLY-------DSSKIRAALEVLQSLSKPRDCTLGNSSLKSSNETTSGLENLSDSH 1228

Query: 910  IEDRRHDIETGSN-----DSIVKVSEKAIVFSQWTRMLDLLEVHLKTSSIQYRRLDGTMS 746
             E    +     N      SI  V EKAIVFSQWTRMLDLLE  LK SSIQYRRLDGTMS
Sbjct: 1229 SEGLLKETCDEKNVVLDKGSITVVGEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMS 1288

Query: 745  VVARDKAVKDFNAIPEVTVMIMSLKAASLGLNMVAACHVILLDLWWNPTTEDQAIDRAHR 566
            VVARDKAVKDFN +PEV+VMIMSLKAASLGLNMVAACHV+LLDLWWNPTTEDQAIDRAHR
Sbjct: 1289 VVARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAIDRAHR 1348

Query: 565  IGQTRPVTVLRLTVKDTVEDRILALQQKKREMVASAFGEDETGSRQTRLTVDDLKYLFM 389
            IGQTRPVTVLRLTVKDTVEDRILALQQKKREMVASAFGEDETGSRQTRLTVDDLKYLFM
Sbjct: 1349 IGQTRPVTVLRLTVKDTVEDRILALQQKKREMVASAFGEDETGSRQTRLTVDDLKYLFM 1407


>ref|XP_003547135.1| PREDICTED: uncharacterized protein LOC100805307 [Glycine max]
          Length = 1307

 Score = 1059 bits (2738), Expect = 0.0
 Identities = 655/1318 (49%), Positives = 811/1318 (61%), Gaps = 52/1318 (3%)
 Frame = -2

Query: 4186 EEAPPTECGLLESTQWSHSGNMILSNPMAQTG-SEEMFEFPE-LSGKIFDEGEVDSVSSP 4013
            E+A P+E       +W    N +L       G S + F  P  L+G   D   ++S    
Sbjct: 37   EDADPSEVWFCAFNEW----NSVLECEHENQGPSSQTFSSPNALAGGFRDSSMLESDEF- 91

Query: 4012 LRTCSVSLTDWSTMSC----------VENDTCSSRERDGVGMNAPLYNFDRTFTPTHVPS 3863
               C   +T  S              V     SS    G  +N PL+  +      H+  
Sbjct: 92   ---CFTEMTGVSNCETPAYIADRRFPVPEANSSSVAVCGDNLNLPLWKCENDSQIKHI-G 147

Query: 3862 CNATFNFASGDSSGSTDHVNLVDLKNEEENEFRHTGGVSHSQCASHFPVVEESDLAFRSH 3683
             +A    AS  S      +N  D +   E+    +G   +  C S      ++D + R  
Sbjct: 148  YDAQSEHASHGSIIENIDLNFGDYETYMEDIIGLSGKQENDSCTSFEMSFVDADRSSRVA 207

Query: 3682 TDLFGN---GFENPGALERSLPTLNAEIAFID------SETCL---VHPHLTEINGSQVS 3539
            T    +   G   P       P+LN      D      S  CL   V+PH+ + N   V 
Sbjct: 208  TSTDSSICQGSNVPNDFSDYYPSLNCYQGMDDRPVVANSSGCLPNGVYPHVRK-NEEMVR 266

Query: 3538 DIHFEGNEIYSEQSSCGRSTTFSDGTVTDSSKKTPHYFSFPFMEIKEENMTCQEDLVEDQ 3359
            ++     E++++ SS G  ++ + G     S+       F F + K  +      L ED 
Sbjct: 267  NMKVAKMELFADTSS-GMHSSINGGISFQDSQ-------FRFADSKYASSFPGNVLFED- 317

Query: 3358 ILSSQTICTTTNTYLEEEAKPQISLSTKAS----VVDCSNRSISQGSSFKHEASSHCLPT 3191
              ++    +T  +Y+  E +   SL+ KA     ++   N   S  + F        LP 
Sbjct: 318  --NASVELSTCGSYISREGQ---SLTVKAERDELIMPYQNSVHSNDAEFNVGQEMKQLP- 371

Query: 3190 GIGSSRHASKNLLPGFPSFIPMKKELVCVDDDRMGEVHASKSACFRSATLE-GYCSDEAP 3014
            GI  +     N       F   + ++  V   +             +     G  + +  
Sbjct: 372  GIFPAVGCQGN------DFFKCRDKVTIVTSQKAKYYQDGIDGAANNFQANMGNLNLKPL 425

Query: 3013 SHSVPDTQSVFLPGPNVP-IKEEKKTEVVPHRYTDYHVKVNGVIKGNHSVDRSNVDDEAD 2837
              S+ + Q     G     +  E + + + HR  D  +      KG  S++RS ++D++D
Sbjct: 426  DKSLYNAQISIASGKQYNCVMSEGEGKAIEHRSIDSQLS-----KG--SIERSIIEDDSD 478

Query: 2836 VCILEDISDPRTQPLGRVHEKSPITAQRVVYDPLYHIGIGNTRVKAFDERITLRVALQDL 2657
            VCI+EDIS P       V   S IT+Q       +   +G+   KA DE+  LRVALQDL
Sbjct: 479  VCIIEDISHPAPISRSTVLGNSLITSQSSRGGYTHSYMVGSMGPKARDEQYILRVALQDL 538

Query: 2656 SQPKSESSPPDGTLAVSLLRHQRIALSWMVQKETASLHCSGGILADDQGLGKTISTIALI 2477
            SQPKSE SPPDG LAV LLRHQRIALSWMVQKET+SL+CSGGILADDQGLGKT+STI LI
Sbjct: 539  SQPKSEVSPPDGLLAVPLLRHQRIALSWMVQKETSSLYCSGGILADDQGLGKTVSTIGLI 598

Query: 2476 LKERPP---------SSKATSVTVKQNEPKAXXXXXXXXXXXXXXNGMKIKSENASML-- 2330
            LKERPP          S+  ++ +  ++ +                  +  ++N ++L  
Sbjct: 599  LKERPPLLNKCNNAQKSELETLNLDADDDQLPENGIVKNESNMCQVSSRNPNQNMNLLLH 658

Query: 2329 AKGRPAAGTLVVCPTSVLRQWSDELHSKVSKEANLSVLVYHGSNRTKDPFELAKYDVVVT 2150
            AKGRP+AGTL+VCPTSVLRQW++ELH+KV+ +A LSVLVYHGSNRTK+P ELAKYDVV+T
Sbjct: 659  AKGRPSAGTLIVCPTSVLRQWAEELHNKVTCKAKLSVLVYHGSNRTKNPHELAKYDVVLT 718

Query: 2149 TYSIVSMEVPKQPLVDKDDDEKGQPEGHGLESMEFSYNKKRKYPPSADXXXXXXXXXXXX 1970
            TYSIVSMEVPKQPLVDKDD+EKG  + H + S      KKRK PPS+             
Sbjct: 719  TYSIVSMEVPKQPLVDKDDEEKGTYDDHAVSS------KKRKCPPSSKSGKKGLDSAMLE 772

Query: 1969 XXXXSITRPLARVGWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDL 1790
                 + RPLA+V WFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDL
Sbjct: 773  A----VARPLAKVAWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDL 828

Query: 1789 YSYFRFLRYDPYAAYKSFCSMIKVPISRNPTNGYKKLQAVLKTIMLRRTKGSLLDGEPII 1610
            YSYFRFLRYDPYA Y SFCS IK+PISR+P+ GY+KLQAVLKTIMLRRTK +LLDGEPII
Sbjct: 829  YSYFRFLRYDPYAVYTSFCSTIKIPISRSPSKGYRKLQAVLKTIMLRRTKATLLDGEPII 888

Query: 1609 NLPPKSVELKRVDFSMEERGFYSKLEADSRDQFKVYAAAGTVKQNYVNILLMLLRLRQAC 1430
            +LPPKSVELK+V+FS EER FYS+LEADSR QF+ YA AGTVKQNYVNILLMLLRLRQAC
Sbjct: 889  SLPPKSVELKKVEFSPEERDFYSRLEADSRAQFQEYADAGTVKQNYVNILLMLLRLRQAC 948

Query: 1429 DHPLLVKGYDSNSVLRSSVEKAKELAGEKQLELLNCLEARSDICGICNDPPEDAVVTICG 1250
            DHPLLVK Y+SNS+ +SSVE AK+L  EK+L LL CLEA   +CGICNDPPEDAVV++CG
Sbjct: 949  DHPLLVKRYNSNSLWKSSVEMAKKLPQEKRLCLLKCLEASLALCGICNDPPEDAVVSVCG 1008

Query: 1249 HVFCNQCILEHLTGDENLCPAAQCKVHLNITSVFSRNALRSSLFGQ--TNLENHASQPDE 1076
            HVFCNQCI E+LTGD+N CPA  CK  L+  SVFS+  L SS   Q   NL +++    E
Sbjct: 1009 HVFCNQCICEYLTGDDNQCPAPNCKTRLSTPSVFSKVTLNSSFSDQPCDNLPDYSGCEVE 1068

Query: 1075 TLVACSKG-PSDSSKIKAALEVLQSLSKPWHYTSKDSTISSINEVGPCPVNASDP----- 914
                CS+  P DSSKIKAALEVLQSLSKP  + S+++++ S +      + +S       
Sbjct: 1069 ESEFCSQAQPYDSSKIKAALEVLQSLSKPQCFASQNNSVQSTSGESTDGLGSSSSADRMK 1128

Query: 913  ---HIEDRRHDIETGSNDSIVKVSEKAIVFSQWTRMLDLLEVHLKTSSIQYRRLDGTMSV 743
                I + ++ +E  S+++ V V EKAIVFSQWTRMLD+LE  LK SSIQYRRLDGTMSV
Sbjct: 1129 SLNEIPESQNVLEERSSNNSVGVGEKAIVFSQWTRMLDILEACLKNSSIQYRRLDGTMSV 1188

Query: 742  VARDKAVKDFNAIPEVTVMIMSLKAASLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRI 563
             ARDKAVKDFN +PEV+VMIMSLKAASLGLNMVAACHV++LDLWWNPTTEDQAIDRAHRI
Sbjct: 1189 TARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRI 1248

Query: 562  GQTRPVTVLRLTVKDTVEDRILALQQKKREMVASAFGEDETGSRQTRLTVDDLKYLFM 389
            GQTRPVTVLRLTV+DTVEDRILALQQKKR+MVASAFGED TG  Q+RLTVDDLKYLFM
Sbjct: 1249 GQTRPVTVLRLTVRDTVEDRILALQQKKRKMVASAFGEDGTGGCQSRLTVDDLKYLFM 1306


>ref|XP_003593498.1| Helicase-like transcription factor [Medicago truncatula]
            gi|355482546|gb|AES63749.1| Helicase-like transcription
            factor [Medicago truncatula]
          Length = 1314

 Score = 1038 bits (2683), Expect = 0.0
 Identities = 567/865 (65%), Positives = 645/865 (74%), Gaps = 37/865 (4%)
 Frame = -2

Query: 2872 SVDRSNVDDEADVCILEDISDPRTQPLGRVHEKSPIT-AQRVVYDPLYHIGIGNTRVKAF 2696
            S + SN +D+ DVCI+EDIS P   P  R  E + +  +Q   +D       G TR KA 
Sbjct: 466  STEGSNDEDDCDVCIIEDISHPA--PTSRSAEFNSLNMSQSSRFDYTQPYMAGGTRPKAH 523

Query: 2695 DERITLRVALQDLSQPKSESSPPDGTLAVSLLRHQ-----------RIALSWMVQKETAS 2549
            DE+  LR ALQD+SQPKSE +PPDG LAV LLRHQ           +IALSWMVQKET+S
Sbjct: 524  DEQYILRAALQDISQPKSEVTPPDGLLAVPLLRHQECGSDGLDLEFKIALSWMVQKETSS 583

Query: 2548 LHCSGGILADDQGLGKTISTIALILKERPPSSKATSVTVKQNEPKAXXXXXXXXXXXXXX 2369
            L+CSGGILADDQGLGKT+STIALILKERPP  K  +     N  K+              
Sbjct: 584  LYCSGGILADDQGLGKTVSTIALILKERPPLLKTCN-----NAQKSVLQTMDLDDDPLPE 638

Query: 2368 NGMKIK---------------SENASMLAKGRPAAGTLVVCPTSVLRQWSDELHSKVSKE 2234
            NG+  K               S N S+ AKGRP+AGTLVVCPTSVLRQW+DELH+KV+ +
Sbjct: 639  NGLVKKESTVCQDASDRNATTSANLSVHAKGRPSAGTLVVCPTSVLRQWADELHNKVTCK 698

Query: 2233 ANLSVLVYHGSNRTKDPFELAKYDVVVTTYSIVSMEVPKQPLVDKDDD---EKGQPEGHG 2063
            ANLSVLVYHGS+RTKDP+ELAKYDVV+TTYSIVSMEVPKQPLVDKDD    EKG  E H 
Sbjct: 699  ANLSVLVYHGSSRTKDPYELAKYDVVLTTYSIVSMEVPKQPLVDKDDKDDKEKGIYEDHP 758

Query: 2062 LESMEFSYNKKRKYPPSADXXXXXXXXXXXXXXXXSITRPLARVGWFRVVLDEAQSIKNH 1883
            +       N+KRK PPS+                    RPLA+V WFRVVLDEAQSIKNH
Sbjct: 759  VP------NRKRKCPPSSKSGKKALNSMMLEAA----ARPLAKVAWFRVVLDEAQSIKNH 808

Query: 1882 RTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAAYKSFCSMIKVPISRN 1703
            RTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYA Y SFCS IK+PI+RN
Sbjct: 809  RTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAVYTSFCSTIKIPINRN 868

Query: 1702 PTNGYKKLQAVLKTIMLRRTKGSLLDGEPIINLPPKSVELKRVDFSMEERGFYSKLEADS 1523
            P+ GY+KLQAVLKTIMLRRTKG+LLDGEPII+LPPKSVEL++V+FS EER FYSKLEADS
Sbjct: 869  PSKGYRKLQAVLKTIMLRRTKGTLLDGEPIISLPPKSVELRKVEFSQEERDFYSKLEADS 928

Query: 1522 RDQFKVYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGYDSNSVLRSSVEKAKELAGEK 1343
            R QF+ YA AGTVKQNYVNILLMLLRLRQACDHPLLVK Y+S ++ +SSVE A +L  EK
Sbjct: 929  RAQFQEYADAGTVKQNYVNILLMLLRLRQACDHPLLVKRYNSTTLWKSSVETAMKLPREK 988

Query: 1342 QLELLNCLEARSDICGICNDPPEDAVVTICGHVFCNQCILEHLTGDENLCPAAQCKVHLN 1163
            QL LL CLEA   +CGICND PE+AVV++CGHVFCNQCI EHLTG++N CPA  CK  LN
Sbjct: 989  QLFLLKCLEASLALCGICNDAPEEAVVSVCGHVFCNQCICEHLTGEDNQCPATNCKTRLN 1048

Query: 1162 ITSVFSRNALRSSLFGQTNLENHASQPDETLVACSKGPSDSSKIKAALEVLQSLSKPWHY 983
            +++VF +  L SS+          S+ +++       P DSSKI+AALEVLQSLSKP  +
Sbjct: 1049 MSAVFPKATLNSSISDPACDHLPGSEVEDSEPCSRTQPCDSSKIRAALEVLQSLSKPQCH 1108

Query: 982  TSKDSTISSIN-EVGPCPVNASD------PHIEDRRHDIETGSNDSIVKVSEKAIVFSQW 824
            TS+ S + S + E   C   +++         E +   +E  SNDS+  + EKAIVFSQW
Sbjct: 1109 TSQRSHVQSTSRESSDCSSTSANNGKSISDVPEKKAMFMEKSSNDSVGSLGEKAIVFSQW 1168

Query: 823  TRMLDLLEVHLKTSSIQYRRLDGTMSVVARDKAVKDFNAIPEVTVMIMSLKAASLGLNMV 644
            T MLDLLE  LK SSIQYRRLDGTMSV+ARDKAVKDFN +PEV+VMIMSLKAASLGLNMV
Sbjct: 1169 TGMLDLLEACLKDSSIQYRRLDGTMSVLARDKAVKDFNTLPEVSVMIMSLKAASLGLNMV 1228

Query: 643  AACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDRILALQQKKREMVA 464
            AACHV++LDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDRILALQQKKR MVA
Sbjct: 1229 AACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDRILALQQKKRTMVA 1288

Query: 463  SAFGEDETGSRQTRLTVDDLKYLFM 389
            SAFGED T  RQTRLTVDDLKYLFM
Sbjct: 1289 SAFGEDGTSGRQTRLTVDDLKYLFM 1313


>ref|XP_002317230.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222860295|gb|EEE97842.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 800

 Score = 1035 bits (2675), Expect = 0.0
 Identities = 550/811 (67%), Positives = 615/811 (75%), Gaps = 26/811 (3%)
 Frame = -2

Query: 2743 DPLYHIGIGNTRVKAFDERITLRVALQDLSQPKSESSPPDGTLAVSLLRHQRIALSWMVQ 2564
            D  +H  +  TR +A DER+ LRVALQDL+QP SE+ PPDG LAV L+RHQRIALSWMVQ
Sbjct: 2    DSPHHSAVEGTRFRANDERLVLRVALQDLAQPNSEAVPPDGVLAVPLMRHQRIALSWMVQ 61

Query: 2563 KETASLHCSGGILADDQGLGKTISTIALILKERPPSSKATSVTVKQNEPKAXXXXXXXXX 2384
            KET+SLHCSGGILADDQGLGKT+STIALILKER PS +A +V VK+ E +          
Sbjct: 62   KETSSLHCSGGILADDQGLGKTVSTIALILKERAPSHRADAVAVKKEECETLNLDDDDDG 121

Query: 2383 XXXXXNGMK-------------IKSENASMLAKGRPAAGTLVVCPTSVLRQWSDELHSKV 2243
                    K              KS N+S  +KGRPAAGTL+VCPTSVLRQW DEL  KV
Sbjct: 122  VTEIDRMKKGADGSQVTSNHSSTKSLNSSGQSKGRPAAGTLIVCPTSVLRQWDDELRKKV 181

Query: 2242 SKEANLSVLVYHGSNRTKDPFELAKYDVVVTTYSIVSMEVPKQPLVDKDDDEKGQPEGHG 2063
            + EANLSVLVYHGSNRTKDP ELAKYDVV+TTYSIVSMEVP+QPL D+DD+EK + EG  
Sbjct: 182  TTEANLSVLVYHGSNRTKDPSELAKYDVVITTYSIVSMEVPRQPLADEDDEEKRRMEGDD 241

Query: 2062 LESMEFSYNKKRKYPPSADXXXXXXXXXXXXXXXXSITRPLARVGWFRVVLDEAQSIKNH 1883
               + FSY+KKRK PPS                  SI RPLA+V WFRVVLDEAQSIKNH
Sbjct: 242  APRLGFSYSKKRKNPPSFGKKGSKNKKGMDSAMLESIARPLAKVAWFRVVLDEAQSIKNH 301

Query: 1882 RTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAAYKSFCSMIKVPISRN 1703
            RT VARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYA YK FCS IKVPI +N
Sbjct: 302  RTHVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAGYKLFCSAIKVPIQKN 361

Query: 1702 PTNGYKKLQAVLKTIMLRRTKGSLLDGEPIINLPPKSVELKRVDFSMEERGFYSKLEADS 1523
               GYKKLQAVLKT+MLRRTKG+LLDGEPIINLPP+ VELK+VDF+ EER FY++LE DS
Sbjct: 362  EQKGYKKLQAVLKTVMLRRTKGTLLDGEPIINLPPRVVELKKVDFTEEEREFYTRLEIDS 421

Query: 1522 RDQFKVYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGYDSNSVLRSSVEKAKELAGEK 1343
            R QFK YAAAGTVKQNYVNILLMLLRLRQACDHP LV G DS+S+  SSVE AK+L  EK
Sbjct: 422  RAQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPRLVSGLDSSSLGSSSVEMAKKLPREK 481

Query: 1342 QLELLNCLEARSDICGICNDPPEDAVVTICGHVFCNQCILEHLTGDENLCPAAQCKVHLN 1163
            QL LLNCLEA    CGIC+DPPEDAVV++CGHVFC QC+ EHLTGD++ CP + CKV LN
Sbjct: 482  QLCLLNCLEASLASCGICSDPPEDAVVSVCGHVFCRQCVFEHLTGDDSQCPMSNCKVRLN 541

Query: 1162 ITSVFSRNALRSSLFGQTNLENHASQPDETLVACSKG-PSDSSKIKAALEVLQSLSKPWH 986
            ++SVFS+  L SSL  +   +   S+    + + S   P DSSKI+ ALE+LQSL+KP  
Sbjct: 542  VSSVFSKATLNSSLSDEPGQDCSDSELVAAVSSSSDNRPHDSSKIRVALEILQSLTKPKD 601

Query: 985  YTSKDSTI-SSINEVGPCPVNASDPHIEDRRHDIETGSNDS-----------IVKVSEKA 842
                 + + +S++E   C             +D  +GS DS           I  V EKA
Sbjct: 602  CLPTGNLLENSVDENVAC-------------YDTSSGSRDSVKDGMDKRCLPIKAVGEKA 648

Query: 841  IVFSQWTRMLDLLEVHLKTSSIQYRRLDGTMSVVARDKAVKDFNAIPEVTVMIMSLKAAS 662
            IVFSQWT MLDLLE  LK SSIQYRRLDGTMSV ARDKAVKDFN +PEV+VMIMSLKAAS
Sbjct: 649  IVFSQWTGMLDLLEACLKNSSIQYRRLDGTMSVTARDKAVKDFNTLPEVSVMIMSLKAAS 708

Query: 661  LGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDRILALQQK 482
            LGLNMVAACHV+LLDLWWNPTTEDQAIDRAHRIGQTR VTVLRLTVK+TVEDRILALQQK
Sbjct: 709  LGLNMVAACHVLLLDLWWNPTTEDQAIDRAHRIGQTRAVTVLRLTVKNTVEDRILALQQK 768

Query: 481  KREMVASAFGEDETGSRQTRLTVDDLKYLFM 389
            KREMVASAFGEDE G RQTRLTVDDL YLFM
Sbjct: 769  KREMVASAFGEDENGGRQTRLTVDDLNYLFM 799