BLASTX nr result

ID: Coptis24_contig00010381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010381
         (1807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278340.1| PREDICTED: uncharacterized protein LOC100257...   127   1e-26
emb|CAN82077.1| hypothetical protein VITISV_016663 [Vitis vinifera]   127   1e-26
ref|XP_002518498.1| hypothetical protein RCOM_0905070 [Ricinus c...   123   2e-25
ref|XP_002319845.1| predicted protein [Populus trichocarpa] gi|2...   114   9e-23
gb|ABR16442.1| unknown [Picea sitchensis]                             111   6e-22

>ref|XP_002278340.1| PREDICTED: uncharacterized protein LOC100257339 [Vitis vinifera]
            gi|297737428|emb|CBI26629.3| unnamed protein product
            [Vitis vinifera]
          Length = 414

 Score =  127 bits (318), Expect = 1e-26
 Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
 Frame = -1

Query: 1555 MSEENPVTDPALVQNLPVKRKRGRPRKDENLRRVEKSPVVTPKPDTAKKNPPKNISSTSN 1376
            M+E N  ++P    N PVKRKRGRPRKD++ +R E + +  P  + A  N P  +   + 
Sbjct: 1    MNEANQGSNPDFPGNFPVKRKRGRPRKDQSKKRGENAHI-PPGFEGADANLPLQVEPINV 59

Query: 1375 GDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVKM 1196
             + AMVGQ VSGV+D SF+AGYL+TV+VG+++T L+GVVF+PG  VPIS  NDVA +V+M
Sbjct: 60   VNDAMVGQVVSGVVDASFDAGYLLTVRVGNSDTILKGVVFKPGRYVPISSENDVAPHVQM 119

Query: 1195 IKRNEIPVDLSGHLHQQ-YNQKTEQ 1124
            I+RNEI +       +Q YN +  +
Sbjct: 120  IRRNEIHLPAGNQSQEQGYNPQARE 144


>emb|CAN82077.1| hypothetical protein VITISV_016663 [Vitis vinifera]
          Length = 479

 Score =  127 bits (318), Expect = 1e-26
 Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
 Frame = -1

Query: 1555 MSEENPVTDPALVQNLPVKRKRGRPRKDENLRRVEKSPVVTPKPDTAKKNPPKNISSTSN 1376
            M+E N  ++P    N PVKRKRGRPRKD++ +R E + +  P  + A  N P  +   + 
Sbjct: 1    MNEANQGSNPDFPGNFPVKRKRGRPRKDQSKKRGENAHI-PPGFEGADANLPLQVEPINV 59

Query: 1375 GDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVKM 1196
             + AMVGQ VSGV+D SF+AGYL+TV+VG+++T L+GVVF+PG  VPIS  NDVA +V+M
Sbjct: 60   VNDAMVGQVVSGVVDASFDAGYLLTVRVGNSDTILKGVVFKPGRYVPISSENDVAPHVQM 119

Query: 1195 IKRNEIPVDLSGHLHQQ-YNQKTEQ 1124
            I+RNEI +       +Q YN +  +
Sbjct: 120  IRRNEIHLPAGNQSQEQGYNPQARE 144


>ref|XP_002518498.1| hypothetical protein RCOM_0905070 [Ricinus communis]
            gi|223542343|gb|EEF43885.1| hypothetical protein
            RCOM_0905070 [Ricinus communis]
          Length = 491

 Score =  123 bits (308), Expect = 2e-25
 Identities = 101/327 (30%), Positives = 157/327 (48%), Gaps = 7/327 (2%)
 Frame = -1

Query: 1555 MSEENPVTDPALVQNLPVKRKRGRPRKDENLRRVEKSP-VVTPKPDTAKKNPPKNISSTS 1379
            M+ ++  T  +   + P+KRKRGRPRKDE++ + E  P   TP  D+ KKN  +++ +  
Sbjct: 1    MNPQSQGTSSSSPADPPLKRKRGRPRKDESMVQGENMPATATPSADSLKKN-KQSVGTAG 59

Query: 1378 NGDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVK 1199
                 MVG+ VSGV++GSF+AGYL+ VKVGDT T LRGVVF PG   PI+ +NDVA   K
Sbjct: 60   AVSDEMVGKVVSGVIEGSFDAGYLLKVKVGDTETHLRGVVFLPGRFTPITASNDVAPEAK 119

Query: 1198 MIKRNEIPVDLSGHLHQQYNQKTEQTVKVPEPLPSKAVTFIDQVSKVAEXXXXXXXXXXX 1019
            M +R E+P+ +     Q          +  +P+  + +  I+QV  ++            
Sbjct: 120  MYRRTEMPIPVPTRPSQVPGPVPSSEERDKQPVELQHLAPINQVKSLSSELQ-------- 171

Query: 1018 XXSKGAPFDMNQIPQPSPQALRQTE----IRTVRSPHILPGEQANEVNQVIQLSFHSLDA 851
                 +   + Q  QPS   L   +    + T +S   L G  A++  Q+++    S  A
Sbjct: 172  -----SSVPLAQENQPSSNMLPLIDNLPPMSTTKSS--LGGGVASQ--QILESVTGSQSA 222

Query: 850  FPKDKMDIPLKGGHDNL-NQVELLQGSRISCLK-GAANGDETKDLKLELKSGTSIEAFSD 677
                 M      GH+ +  + ++L+    S  +    N + T+  K    S   I +F  
Sbjct: 223  SVMANM------GHEKVTGRNDMLKEFEASLTELPNVNVEATEQSKAMPHSAPPIHSFPG 276

Query: 676  NGTIATESEAPDQVAGIEHEPIQKTDG 596
            +GTI  E E   Q+     +P Q  DG
Sbjct: 277  SGTINPEQEIQPQIVSNNFKPSQVCDG 303


>ref|XP_002319845.1| predicted protein [Populus trichocarpa] gi|222858221|gb|EEE95768.1|
            predicted protein [Populus trichocarpa]
          Length = 328

 Score =  114 bits (285), Expect = 9e-23
 Identities = 57/128 (44%), Positives = 82/128 (64%)
 Frame = -1

Query: 1555 MSEENPVTDPALVQNLPVKRKRGRPRKDENLRRVEKSPVVTPKPDTAKKNPPKNISSTSN 1376
            MSE N   +P     +P+KR+RGRPRK   +  V+ +    P       N P  +   +N
Sbjct: 1    MSEANQGNNPDASAIVPLKRRRGRPRKYPKME-VDHNAHAPPGFGVVNSNQPHQVGPVNN 59

Query: 1375 GDYAMVGQAVSGVLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVKM 1196
               AM+GQ+V GV++ +F+AGYL+ V+VGDT T LRGVVF+PG  +P++  ND+A +V M
Sbjct: 60   AIDAMIGQSVYGVIEATFDAGYLLNVRVGDTETTLRGVVFKPGHYIPVNPENDIAPDVPM 119

Query: 1195 IKRNEIPV 1172
            I+RNEIP+
Sbjct: 120  IRRNEIPL 127


>gb|ABR16442.1| unknown [Picea sitchensis]
          Length = 305

 Score =  111 bits (278), Expect = 6e-22
 Identities = 63/113 (55%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
 Frame = -1

Query: 1513 NLPVKRKRGRPRKDENLRRVEKSPVVTPKPDTAKKNPPKNISST--SNGDYAMVGQAVSG 1340
            ++P KRKRGRPRK   L   EK+ V   + D  KK   K I S+  S  D   VGQ+V G
Sbjct: 14   DIPPKRKRGRPRKQHLLYPGEKAHV-PQRLDGKKKPRRKKIDSSMPSFPDNTFVGQSVHG 72

Query: 1339 VLDGSFEAGYLITVKVGDTNTFLRGVVFEPGFVVPISEANDVASNVKMIKRNE 1181
            VLDGSF+AGYL+ V+VGDT+T LRGVVF+PG  VPIS+AND+A NV + +R+E
Sbjct: 73   VLDGSFDAGYLLMVRVGDTDTVLRGVVFDPGMSVPISKANDIAPNVNLTRRDE 125


Top