BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010166
         (2213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   173   3e-99
ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-87
ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-...   162   3e-86
emb|CBI31781.3| unnamed protein product [Vitis vinifera]              171   3e-85
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-...   159   1e-84

>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  151 bits (381), Expect(3) = 3e-99
 Identities = 73/114 (64%), Positives = 93/114 (81%)
 Frame = +3

Query: 660  TASSPTVVNHVAKLLSLHNKDAADQKDLQNLFIASDGQFPEVARSQTTVEVANHKLDSLI 839
            TASS  ++ + AKLLS  NK+AAD+ DL NLFI S GQFPEVA++++ V+ A  KLD LI
Sbjct: 600  TASSSGIIGNAAKLLSTLNKEAADKGDLPNLFIISSGQFPEVAKARSLVQSAKEKLDLLI 659

Query: 840  SMYRKQLGVRNLDFIGVSGSTHLIELRSDLRLPSNWVKVNSTKRTIRYHPPEVL 1001
             +YRKQL + NL+F+ VSG+THLIEL  D+++PSNWVKVNSTK+T+RYHPPEVL
Sbjct: 660  GLYRKQLRMNNLEFMSVSGTTHLIELPVDVKVPSNWVKVNSTKKTVRYHPPEVL 713



 Score =  147 bits (371), Expect(3) = 3e-99
 Identities = 71/95 (74%), Positives = 82/95 (86%)
 Frame = +3

Query: 3   HLLGVEGIMTMPGLAVQALALIMRHLKQFGFERIMCLCSTLCPFYSNIEMTLSANTLQQL 182
           H L +EGIM+MP LAVQALAL +RHLKQFG ERI+C+ ++  PF SN+EMTLSAN LQQL
Sbjct: 378 HCLAIEGIMSMPDLAVQALALTIRHLKQFGLERILCMGASFRPFSSNMEMTLSANALQQL 437

Query: 183 EVSRNNSDGSETGSLLHAMNHTLTIFGSRLLKHWV 287
           EV  N+SDGSE+GSLLH MNHTLTIFGSRLL+HWV
Sbjct: 438 EVLNNHSDGSESGSLLHTMNHTLTIFGSRLLRHWV 472



 Score =  114 bits (284), Expect(3) = 3e-99
 Identities = 64/112 (57%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
 Frame = +2

Query: 311 ISARLDAVSEIEESMAP-STKQDGGSIDNEDECVAHVKPLINDVLSSVLTTLGISTDIQR 487
           ISARLDAVSEI  SM      Q+ G ID  D  V +V+P +N +LSSVLTTLG S DIQR
Sbjct: 482 ISARLDAVSEIVMSMGSCKASQNFGGIDEGDSDVTYVQPEVNYLLSSVLTTLGRSPDIQR 541

Query: 488 GITRIFHRTATTFEFIAVVHTILYARKQLQQLQVEHKDSNEELQKKTAFSLI 643
           G+TRIFHRTAT  EFI+V   IL+A KQLQ+L +E KD +E+ Q ++  S++
Sbjct: 542 GLTRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDVDEKGQSRSVRSVL 593



 Score =  171 bits (434), Expect(2) = 1e-46
 Identities = 89/131 (67%), Positives = 106/131 (80%), Gaps = 12/131 (9%)
 Frame = +2

Query: 1235 LDCPY*LAVLSRNKNYVRPVFVNDTESVQIHIHSGRHPVLDLILQDSFVPNDTNLNAEGE 1414
            LDC + LA+LSRNKNYVRPVFV D+E VQ+HI SGRHPVL+ +LQD+FVPNDTNL+A+GE
Sbjct: 758  LDCLHSLAILSRNKNYVRPVFVGDSEPVQMHICSGRHPVLETVLQDNFVPNDTNLHADGE 817

Query: 1415 YCQIVTGPNMGGNSCYIHQVALLCIMAQ---HLPRNC--MC-------WMGASDNIQQGR 1558
            YC+IVTGPNMGG SCYI QVAL+ IMAQ    +P +   +C        MG+SD+IQQGR
Sbjct: 818  YCEIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKLCVLDGIHTRMGSSDSIQQGR 877

Query: 1559 STFLDELSEAS 1591
            STFL+ELSEAS
Sbjct: 878  STFLEELSEAS 888



 Score = 43.9 bits (102), Expect(2) = 1e-46
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +1

Query: 1153 CRSAWDRFLEGFSKYYAEFPASVQALA 1233
            CR AWD FL  F KY++EF A+VQALA
Sbjct: 730  CRGAWDSFLRAFDKYFSEFQAAVQALA 756



 Score =  173 bits (439), Expect = 2e-40
 Identities = 96/166 (57%), Positives = 119/166 (71%), Gaps = 14/166 (8%)
 Frame = +1

Query: 1498 ASSAKLHVLDG------SLRQYPARQEHFLR*IE*GLDILHNSTSRSLVIIDELGRATST 1659
            ASSAKL VLDG      S       +  FL  +     I+HN TSRSLVIIDELGR TST
Sbjct: 852  ASSAKLCVLDGIHTRMGSSDSIQQGRSTFLEELSEASHIIHNCTSRSLVIIDELGRGTST 911

Query: 1660 HDGVAIAYATLHHLL-GKKCMILFVTHYPKVVDIKNDFPNSVGDYHVSYLSSENA*EV-- 1830
            HDGVAIAYATLH+LL  K+CM+LFVTHYPK+VD+KN+FP SVG YHVSY+ S+ A ++  
Sbjct: 912  HDGVAIAYATLHYLLEHKRCMVLFVTHYPKIVDVKNEFPGSVGAYHVSYMMSQRAMDMDT 971

Query: 1831 ----TDFELDYN-ENMEHGDITFLYKVVPGTSDKSFGLNVARLAQV 1953
                TD + D N + M+H D+T+LYK+VPG S++SFG  VA+LAQ+
Sbjct: 972  DTDKTDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQL 1017


>ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1|
            predicted protein [Populus trichocarpa]
          Length = 1092

 Score =  149 bits (376), Expect(3) = 1e-87
 Identities = 75/113 (66%), Positives = 90/113 (79%)
 Frame = +3

Query: 663  ASSPTVVNHVAKLLSLHNKDAADQKDLQNLFIASDGQFPEVARSQTTVEVANHKLDSLIS 842
            ASS +VV + AKLLS  NK+AA+Q DL NL I SD QFPEVAR++  V+ A  KLDSLI 
Sbjct: 603  ASSSSVVGNAAKLLSTLNKEAAEQGDLTNLIIISDDQFPEVARAREAVQFAKEKLDSLIG 662

Query: 843  MYRKQLGVRNLDFIGVSGSTHLIELRSDLRLPSNWVKVNSTKRTIRYHPPEVL 1001
            +YRKQL +RNL+F+ VSG+THLIEL  D ++P NWVKVNSTK+ IRYHPPEVL
Sbjct: 663  LYRKQLQMRNLEFMSVSGTTHLIELPLDFKVPLNWVKVNSTKKMIRYHPPEVL 715



 Score =  144 bits (362), Expect(3) = 1e-87
 Identities = 68/93 (73%), Positives = 82/93 (88%)
 Frame = +3

Query: 9   LGVEGIMTMPGLAVQALALIMRHLKQFGFERIMCLCSTLCPFYSNIEMTLSANTLQQLEV 188
           L +EG++ MP LAV+ALAL +RHLKQFGF+R++CL ++  PF SN+EM LSANTLQQLEV
Sbjct: 355 LAIEGVIKMPDLAVEALALTVRHLKQFGFDRMLCLGASFRPFSSNMEMNLSANTLQQLEV 414

Query: 189 SRNNSDGSETGSLLHAMNHTLTIFGSRLLKHWV 287
            RNNSDGSE+GSLLH MNHTLTI+GSRLL+HWV
Sbjct: 415 LRNNSDGSESGSLLHIMNHTLTIYGSRLLRHWV 447



 Score = 80.9 bits (198), Expect(3) = 1e-87
 Identities = 59/141 (41%), Positives = 76/141 (53%), Gaps = 28/141 (19%)
 Frame = +2

Query: 311 ISARLDAVSEIEESMAPST-KQDGGSIDNEDECVAHVKPLINDVLSSVLTTLGISTDIQR 487
           ISARLDAVSEI E M  S   Q    +D +D  VA V+P +  +LS+VLT LG S DI+R
Sbjct: 457 ISARLDAVSEIAECMGFSKDSQRVSELDEDDSEVAIVQPDLYYLLSAVLTALGRSPDIER 516

Query: 488 GITRIFHRTATTFE---------------------------FIAVVHTILYARKQLQQLQ 586
           GITRIFHRTAT  E                           FIAV   IL A KQL++L 
Sbjct: 517 GITRIFHRTATASEFLLMFLIMYLTYLSSFSSPIAVLVWLWFIAVFQAILAAGKQLKRLC 576

Query: 587 VEHKDSNEELQKKTAFSLIEK 649
           ++ + + + +  KT  S++ K
Sbjct: 577 IQEEHNYDGVGSKTVKSVLLK 597



 Score =  157 bits (397), Expect(2) = 2e-41
 Identities = 80/132 (60%), Positives = 99/132 (75%), Gaps = 12/132 (9%)
 Frame = +2

Query: 1235 LDCPY*LAVLSRNKNYVRPVFVNDTESVQIHIHSGRHPVLDLILQDSFVPNDTNLNAEGE 1414
            LDC +  A L +NKNYVRP+FV+D+E +QI+I SGRHPVL+ ILQD+FVPNDTNL A+ E
Sbjct: 760  LDCLFSFATLLKNKNYVRPMFVDDSEPLQINICSGRHPVLETILQDNFVPNDTNLCADKE 819

Query: 1415 YCQIVTGPNMGGNSCYIHQVALLCIMAQ------------HLPRNCMCWMGASDNIQQGR 1558
            YCQIVTGPNMGG SCYI QVAL+ +MAQ            H+       MGASD+IQQGR
Sbjct: 820  YCQIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLHVLDGIYTRMGASDSIQQGR 879

Query: 1559 STFLDELSEASI 1594
            STFL+EL+++ +
Sbjct: 880  STFLEELTQSLV 891



 Score = 40.8 bits (94), Expect(2) = 2e-41
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +1

Query: 1156 RSAWDRFLEGFSKYYAEFPASVQALA 1233
            R+AWD FL GF  YYAEF  +VQALA
Sbjct: 733  RAAWDSFLRGFGIYYAEFRGAVQALA 758



 Score =  149 bits (376), Expect = 3e-33
 Identities = 83/153 (54%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
 Frame = +1

Query: 1498 ASSAKLHVLDGSLRQYPARQEHFLR*IE*GLDILHNSTSRSLVIIDELGRATSTHDGVAI 1677
            A SAKLHVLDG   +  A        I+ G        ++SLVIIDELGR TST+DG AI
Sbjct: 854  ALSAKLHVLDGIYTRMGASDS-----IQQGRSTFLEELTQSLVIIDELGRGTSTYDGEAI 908

Query: 1678 AYATLHHLLG-KKCMILFVTHYPKVVDIKNDFPNSVGDYHVSYLSSENA*EVTDFELDYN 1854
            AYATL+HLL  K+CM+LFVTHYPK+V+IK +FP SVG YHVSYL+SE +      E    
Sbjct: 909  AYATLYHLLDQKRCMVLFVTHYPKIVEIKTEFPGSVGAYHVSYLTSEKS------EGAIE 962

Query: 1855 ENMEHGDITFLYKVVPGTSDKSFGLNVARLAQV 1953
               +  D+T+LYK+VPG S+KSFG  VA+LA++
Sbjct: 963  STCDTEDVTYLYKLVPGVSEKSFGFKVAQLAEL 995


>ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
          Length = 1070

 Score =  148 bits (373), Expect(3) = 3e-86
 Identities = 71/114 (62%), Positives = 93/114 (81%)
 Frame = +3

Query: 660  TASSPTVVNHVAKLLSLHNKDAADQKDLQNLFIASDGQFPEVARSQTTVEVANHKLDSLI 839
            TASS +V+ + AK+LS  N D+AD  DL  L IAS+GQFPEV +S+   ++A  +LDS+I
Sbjct: 567  TASSDSVIGNAAKMLSSLNIDSADLGDLTKLIIASEGQFPEVCQSREAFKLAVEQLDSMI 626

Query: 840  SMYRKQLGVRNLDFIGVSGSTHLIELRSDLRLPSNWVKVNSTKRTIRYHPPEVL 1001
              YRKQLG++NL+FI +SG+THLIEL +D+++PSNWVKVNSTK+TIRYHPPEVL
Sbjct: 627  DFYRKQLGMKNLEFISISGTTHLIELSTDVKVPSNWVKVNSTKKTIRYHPPEVL 680



 Score =  132 bits (333), Expect(3) = 3e-86
 Identities = 65/91 (71%), Positives = 76/91 (83%)
 Frame = +3

Query: 15  VEGIMTMPGLAVQALALIMRHLKQFGFERIMCLCSTLCPFYSNIEMTLSANTLQQLEVSR 194
           ++ +M MP LAVQALAL +RHLK+FGFERI+C  +++ PF SN EMTLSAN LQQLEV +
Sbjct: 356 IKEVMNMPDLAVQALALTIRHLKEFGFERILCSGASIRPFSSNTEMTLSANALQQLEVLK 415

Query: 195 NNSDGSETGSLLHAMNHTLTIFGSRLLKHWV 287
           NNSDGSE GSLL  MN TLTIFGSRLL+HWV
Sbjct: 416 NNSDGSEIGSLLQIMNRTLTIFGSRLLRHWV 446



 Score = 88.2 bits (217), Expect(3) = 3e-86
 Identities = 54/99 (54%), Positives = 63/99 (63%)
 Frame = +2

Query: 311 ISARLDAVSEIEESMAPSTKQDGGSIDNEDECVAHVKPLINDVLSSVLTTLGISTDIQRG 490
           ISARL AVSEI +SM             ED  VA V+P +   LS VLTTLG + DIQRG
Sbjct: 456 ISARLHAVSEIAQSMGSCNSVKNLVRVEEDPDVAIVQPELAYTLSLVLTTLGRAPDIQRG 515

Query: 491 ITRIFHRTATTFEFIAVVHTILYARKQLQQLQVEHKDSN 607
           ITRIFH TAT  EF+AV+  IL A KQLQQL +   ++N
Sbjct: 516 ITRIFHCTATPSEFVAVIQAILSAGKQLQQLNIGEGNNN 554



 Score =  162 bits (409), Expect(2) = 2e-44
 Identities = 85/131 (64%), Positives = 97/131 (74%), Gaps = 12/131 (9%)
 Frame = +2

Query: 1235 LDCPY*LAVLSRNKNYVRPVFVNDTESVQIHIHSGRHPVLDLILQDSFVPNDTNLNAEGE 1414
            LDC + LA+LSRNK YV PVFV+D E VQI I SGRHPVL+  LQD+FVPNDTN++A+GE
Sbjct: 725  LDCLHSLAILSRNKGYVCPVFVDDHEPVQIQISSGRHPVLETTLQDNFVPNDTNMHADGE 784

Query: 1415 YCQIVTGPNMGGNSCYIHQVALLCIMAQ------------HLPRNCMCWMGASDNIQQGR 1558
            YCQIVTGPNMGG SCYI QVAL+ IMAQ            H+       MGASD+IQ GR
Sbjct: 785  YCQIVTGPNMGGKSCYIRQVALIVIMAQVGSFVPASSAKLHVLDRIYTRMGASDSIQLGR 844

Query: 1559 STFLDELSEAS 1591
            STFL+ELSE S
Sbjct: 845  STFLEELSETS 855



 Score = 45.8 bits (107), Expect(2) = 2e-44
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +1

Query: 1153 CRSAWDRFLEGFSKYYAEFPASVQALAA 1236
            CR+AW+ FL  FSK+YAEF A+VQALAA
Sbjct: 697  CRAAWNNFLTDFSKHYAEFQAAVQALAA 724



 Score =  144 bits (363), Expect = 1e-31
 Identities = 82/162 (50%), Positives = 107/162 (66%), Gaps = 7/162 (4%)
 Frame = +1

Query: 1498 ASSAKLHVLD------GSLRQYPARQEHFLR*IE*GLDILHNSTSRSLVIIDELGRATST 1659
            ASSAKLHVLD      G+       +  FL  +     IL++ T  SLVIIDELGR TST
Sbjct: 819  ASSAKLHVLDRIYTRMGASDSIQLGRSTFLEELSETSHILNSCTEHSLVIIDELGRGTST 878

Query: 1660 HDGVAIAYATLHHLL-GKKCMILFVTHYPKVVDIKNDFPNSVGDYHVSYLSSENA*EVTD 1836
            HDG+AIA+ATLH+LL  K+ M+LFVTHYPK+  +  +FP SV  YHVS+L S +A     
Sbjct: 879  HDGMAIAHATLHYLLKQKRSMVLFVTHYPKIASLATEFPGSVAAYHVSHLISHDA----- 933

Query: 1837 FELDYNENMEHGDITFLYKVVPGTSDKSFGLNVARLAQVSDY 1962
                 N N++H D+T+LYK+VPG S++SFG  VA+LAQ+  +
Sbjct: 934  ---SKNSNLDH-DVTYLYKLVPGVSERSFGFKVAQLAQLPSH 971


>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score =  151 bits (381), Expect(3) = 3e-85
 Identities = 73/114 (64%), Positives = 93/114 (81%)
 Frame = +3

Query: 660  TASSPTVVNHVAKLLSLHNKDAADQKDLQNLFIASDGQFPEVARSQTTVEVANHKLDSLI 839
            TASS  ++ + AKLLS  NK+AAD+ DL NLFI S GQFPEVA++++ V+ A  KLD LI
Sbjct: 460  TASSSGIIGNAAKLLSTLNKEAADKGDLPNLFIISSGQFPEVAKARSLVQSAKEKLDLLI 519

Query: 840  SMYRKQLGVRNLDFIGVSGSTHLIELRSDLRLPSNWVKVNSTKRTIRYHPPEVL 1001
             +YRKQL + NL+F+ VSG+THLIEL  D+++PSNWVKVNSTK+T+RYHPPEVL
Sbjct: 520  GLYRKQLRMNNLEFMSVSGTTHLIELPVDVKVPSNWVKVNSTKKTVRYHPPEVL 573



 Score =  140 bits (352), Expect(3) = 3e-85
 Identities = 68/89 (76%), Positives = 78/89 (87%)
 Frame = +3

Query: 21  GIMTMPGLAVQALALIMRHLKQFGFERIMCLCSTLCPFYSNIEMTLSANTLQQLEVSRNN 200
           GIM+MP LAVQALAL +RHLKQFG ERI+C+ ++  PF SN+EMTLSAN LQQLEV  N+
Sbjct: 272 GIMSMPDLAVQALALTIRHLKQFGLERILCMGASFRPFSSNMEMTLSANALQQLEVLNNH 331

Query: 201 SDGSETGSLLHAMNHTLTIFGSRLLKHWV 287
           SDGSE+GSLLH MNHTLTIFGSRLL+HWV
Sbjct: 332 SDGSESGSLLHTMNHTLTIFGSRLLRHWV 360



 Score = 74.3 bits (181), Expect(3) = 3e-85
 Identities = 49/111 (44%), Positives = 60/111 (54%)
 Frame = +2

Query: 311 ISARLDAVSEIEESMAPSTKQDGGSIDNEDECVAHVKPLINDVLSSVLTTLGISTDIQRG 490
           ISARLDAVSEI  SM                C A                 G S DIQRG
Sbjct: 370 ISARLDAVSEIVMSMG--------------SCKAS-------------QNFGRSPDIQRG 402

Query: 491 ITRIFHRTATTFEFIAVVHTILYARKQLQQLQVEHKDSNEELQKKTAFSLI 643
           +TRIFHRTAT  EFI+V   IL+A KQLQ+L +E KD +E+ Q ++  S++
Sbjct: 403 LTRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDVDEKGQSRSVRSVL 453



 Score =  171 bits (434), Expect(2) = 1e-46
 Identities = 89/131 (67%), Positives = 106/131 (80%), Gaps = 12/131 (9%)
 Frame = +2

Query: 1235 LDCPY*LAVLSRNKNYVRPVFVNDTESVQIHIHSGRHPVLDLILQDSFVPNDTNLNAEGE 1414
            LDC + LA+LSRNKNYVRPVFV D+E VQ+HI SGRHPVL+ +LQD+FVPNDTNL+A+GE
Sbjct: 618  LDCLHSLAILSRNKNYVRPVFVGDSEPVQMHICSGRHPVLETVLQDNFVPNDTNLHADGE 677

Query: 1415 YCQIVTGPNMGGNSCYIHQVALLCIMAQ---HLPRNC--MC-------WMGASDNIQQGR 1558
            YC+IVTGPNMGG SCYI QVAL+ IMAQ    +P +   +C        MG+SD+IQQGR
Sbjct: 678  YCEIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKLCVLDGIHTRMGSSDSIQQGR 737

Query: 1559 STFLDELSEAS 1591
            STFL+ELSEAS
Sbjct: 738  STFLEELSEAS 748



 Score = 43.9 bits (102), Expect(2) = 1e-46
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +1

Query: 1153 CRSAWDRFLEGFSKYYAEFPASVQALA 1233
            CR AWD FL  F KY++EF A+VQALA
Sbjct: 590  CRGAWDSFLRAFDKYFSEFQAAVQALA 616



 Score =  133 bits (334), Expect = 2e-28
 Identities = 82/162 (50%), Positives = 102/162 (62%), Gaps = 10/162 (6%)
 Frame = +1

Query: 1498 ASSAKLHVLDG------SLRQYPARQEHFLR*IE*GLDILHNSTSRSLVIIDELGRATST 1659
            ASSAKL VLDG      S       +  FL  +     I+HN TSRSLVIIDELGR TST
Sbjct: 712  ASSAKLCVLDGIHTRMGSSDSIQQGRSTFLEELSEASHIIHNCTSRSLVIIDELGRGTST 771

Query: 1660 HDGVAIAYATLHHLL-GKKCMILFVTHYPKV--VDIKNDFPNSVGDYHVSYLSSENA*EV 1830
            HDGVAIAYATLH+LL  K+CM+LFVTHYPK+  +D+  D                   + 
Sbjct: 772  HDGVAIAYATLHYLLEHKRCMVLFVTHYPKIRAMDMDTDT------------------DK 813

Query: 1831 TDFELDYN-ENMEHGDITFLYKVVPGTSDKSFGLNVARLAQV 1953
            TD + D N + M+H D+T+LYK+VPG S++SFG  VA+LAQ+
Sbjct: 814  TDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQL 855


>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 1094

 Score =  138 bits (347), Expect(3) = 1e-84
 Identities = 67/114 (58%), Positives = 87/114 (76%)
 Frame = +3

Query: 660  TASSPTVVNHVAKLLSLHNKDAADQKDLQNLFIASDGQFPEVARSQTTVEVANHKLDSLI 839
            +ASS  ++N  AKLLS  +K+AADQ D  NL I    QFP+VAR++   + A  KLD+LI
Sbjct: 600  SASSSGLINIAAKLLSTISKEAADQGDFPNLMIIYSDQFPKVARARKEAQSAREKLDALI 659

Query: 840  SMYRKQLGVRNLDFIGVSGSTHLIELRSDLRLPSNWVKVNSTKRTIRYHPPEVL 1001
            + YRKQLG+R L+F  VSG+THLIEL  D+++PS WVK+NSTK+T+RYHPPEVL
Sbjct: 660  TFYRKQLGMRKLEFTSVSGTTHLIELAIDVKVPSQWVKINSTKKTVRYHPPEVL 713



 Score =  127 bits (320), Expect(3) = 1e-84
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = +3

Query: 15  VEGIMTMPGLAVQALALIMRHLKQFGFERIMCLCSTLCPFYSNIEMTLSANTLQQLEVSR 194
           ++ I+ MP LA+QALAL +RHLKQFG ERI+ L S+  PF   +EMTLS NTL QLEV +
Sbjct: 383 IKEIVNMPNLALQALALTIRHLKQFGLERIVSLASSFRPFSCKMEMTLSGNTLTQLEVLK 442

Query: 195 NNSDGSETGSLLHAMNHTLTIFGSRLLKHWV 287
           NN DGSETGSLLH MNHTLTIFGSRLL+ W+
Sbjct: 443 NNDDGSETGSLLHCMNHTLTIFGSRLLRQWI 473



 Score = 97.8 bits (242), Expect(3) = 1e-84
 Identities = 56/119 (47%), Positives = 76/119 (63%), Gaps = 1/119 (0%)
 Frame = +2

Query: 311 ISARLDAVSEIEESMAPS-TKQDGGSIDNEDECVAHVKPLINDVLSSVLTTLGISTDIQR 487
           I AR +AVSEI  SM  S    +  ++D E   V  ++P +N +LSSVLTTLG + DIQR
Sbjct: 483 IIARQEAVSEIAASMVSSKVSPNNRALDEEYSDVIVIEPELNYILSSVLTTLGRAPDIQR 542

Query: 488 GITRIFHRTATTFEFIAVVHTILYARKQLQQLQVEHKDSNEELQKKTAFSLIEKVNINS 664
           GITRIFHRTA   EFIAV+  IL+A KQLQQ  ++ +D N   +      L+ K+ +++
Sbjct: 543 GITRIFHRTAAPSEFIAVIQAILFAGKQLQQFHIDEEDDNCSSESIIGSKLLRKLILSA 601



 Score =  159 bits (403), Expect = 2e-36
 Identities = 115/289 (39%), Positives = 152/289 (52%), Gaps = 23/289 (7%)
 Frame = +1

Query: 1156 RSAWDRFLEGFSKYYAEFPASVQALAA-----GLSVLTCC-SFKK*ELCSSCFCE*YGIC 1317
            R AWD FL GFS+YYAEF A+VQALA+      L++L+   ++ + E           +C
Sbjct: 731  RDAWDDFLRGFSRYYAEFQAAVQALASIDCLYSLAILSRNKNYARPEFVPDDEPAQIHLC 790

Query: 1318 SDSYPFWSSSGVRFDTTGQFCPK*YKLECRRGVLS----------DCHWAKHGWK*LLHS 1467
            S  +P    +       G F P    L+                  C+  +     L+  
Sbjct: 791  SGRHPVLEGT-----LQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQ 845

Query: 1468 PGCSPLYHGSASSAKLHVLDGSLRQYPAR------QEHFLR*IE*GLDILHNSTSRSLVI 1629
             G        A SAKLHVLDG   +  A       +  FL  +     IL +S+SRSLVI
Sbjct: 846  VGSFV----PAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVI 901

Query: 1630 IDELGRATSTHDGVAIAYATLHHLL-GKKCMILFVTHYPKVVDIKNDFPNSVGDYHVSYL 1806
            IDELGR TSTHDGVAIAYA LH LL  KKC++LFVTHYPKV +I  +FP S G YHVSYL
Sbjct: 902  IDELGRGTSTHDGVAIAYAALHSLLQQKKCLVLFVTHYPKVAEIAKEFPASAGVYHVSYL 961

Query: 1807 SSENA*EVTDFELDYNENMEHGDITFLYKVVPGTSDKSFGLNVARLAQV 1953
            +S  +  ++             D+T+LYK++ G ++ SFG  VA+LAQ+
Sbjct: 962  TSHKSPSLSG-------PKSTEDVTYLYKLISGVAESSFGFKVAQLAQI 1003