BLASTX nr result
ID: Coptis24_contig00010151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010151
(1617 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chlorop... 425 e-116
ref|XP_004160413.1| PREDICTED: zinc finger protein VAR3, chlorop... 378 e-102
ref|XP_004137347.1| PREDICTED: zinc finger protein VAR3, chlorop... 378 e-102
ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago trun... 358 2e-96
ref|NP_001051041.1| Os03g0708900 [Oryza sativa Japonica Group] g... 354 3e-95
>ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
vinifera] gi|297734333|emb|CBI15580.3| unnamed protein
product [Vitis vinifera]
Length = 410
Score = 425 bits (1093), Expect = e-116
Identities = 213/395 (53%), Positives = 263/395 (66%), Gaps = 43/395 (10%)
Frame = -2
Query: 1394 TASEAIDTLTDNDGSSETTSFSYSHPWPEWVSFIEKLNSNGYFDKSLLPXXXXXXXXXXX 1215
T S A+DT+T +++T + HPWPEWV+FI++L + GYF ++L
Sbjct: 36 TCSAAVDTVT-----ADSTDSHHRHPWPEWVTFIDRLKTKGYFSEAL------------- 77
Query: 1214 XXDAVIGTTNRDLNKLRNASLTFSRDRFDIFRSLSREHIQTMVECGCPSLFRKAVNSAKR 1035
+ ++N ++A L F+RDRFD+F+SLSR+ IQT+VE GCP+LFRKAVNSAKR
Sbjct: 78 ---PASADYDTNMNLFKDACLIFARDRFDVFKSLSRKDIQTVVEGGCPNLFRKAVNSAKR 134
Query: 1034 LRAFLKLDEGDVCSACNLRGSCDRAYGILKDSEASARTVDIVRMLLIYALDPIVLSGEEK 855
LRAF++LDEGDVCSACNLRGSCDRAY +LK+SEA+ARTVDIVR+LL YALDP+V SG EK
Sbjct: 135 LRAFVRLDEGDVCSACNLRGSCDRAYVLLKESEAAARTVDIVRILLFYALDPLVTSG-EK 193
Query: 854 PHGREQIEASARKLLSELVELSETPPDPALPKPAINPPRVSQ------------------ 729
P GRE +E SARKLLSEL+ELS+TP DPAL KPA PPR +
Sbjct: 194 PPGRELVEVSARKLLSELIELSDTPLDPALAKPAAIPPRRKEQHMNLTDDEMPQNVQMKK 253
Query: 728 -------------------------GMGREPSKDVEMKRGDWICPNCTFMNFARNIRCLE 624
G R+ +EMK+GDW CP C FMNF+RNIRCL+
Sbjct: 254 GDWICPNCNFLNFARNTQCMKCREDGPKRDSLNVIEMKKGDWTCPECNFMNFSRNIRCLK 313
Query: 623 CKADGPNRVNIDDIDKKKGDWTCPQCQFMNFARNTKCIRPHCGEPRPKRDLQPGEWECPK 444
C+A+GP RV+ DI KKGDW CPQC FMNFA T+C R C EPRPKR L PGEWECP
Sbjct: 314 CRAEGPKRVDAADIPMKKGDWNCPQCAFMNFASKTECFR--CREPRPKRQLNPGEWECPS 371
Query: 443 CDFLNYRRNKFCLKCSCDKPKDEVAEYEDIIWKRP 339
CDF+NYRRN CLKC+ D+PK+ YE+ +WK+P
Sbjct: 372 CDFVNYRRNTVCLKCNRDQPKEAATPYEEHVWKKP 406
>ref|XP_004160413.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Cucumis
sativus]
Length = 445
Score = 378 bits (971), Expect = e-102
Identities = 200/437 (45%), Positives = 263/437 (60%), Gaps = 50/437 (11%)
Frame = -2
Query: 1496 PLFTKTPSSISKTHVLLPLPYSFISK-PLILKSYTTASEAIDTLTDNDGSS-----ETTS 1335
P F ++IS+T P+ F + P S+ S + T+ D+ GS + S
Sbjct: 4 PKFLYMGTAISRTTSRALSPFLFPRRLPSKFISFMKCSSS--TVLDSVGSGGADAPQPHS 61
Query: 1334 FSYSHPWPEWVSFIEKLNSNGYFDKSLLPXXXXXXXXXXXXXDAVIGTTNRDLNKLRNAS 1155
HPWPEWVSF++ L + GY + VI + D+N L++A
Sbjct: 62 TLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYS--DMNVLKDAC 119
Query: 1154 LTFSRDRFDIFRSLSREHIQTMVECGCPSLFRKAVNSAKRLRAFLKLDEGDVCSACNLRG 975
++F+RDRFDIF+SLS + IQT+V+ GCP+L RKAVNSAKRLRA+++LDEGDVCS CNLRG
Sbjct: 120 VSFARDRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRG 179
Query: 974 SCDRAYGILKDSEASARTVDIVRMLLIYALDPIVLSGEEKPHGREQIEASARKLLSELVE 795
SCDRAY ILK ++ +ARTVD+ R+LL YALDP+VLSG +KP GRE +E S RKLLS+L E
Sbjct: 180 SCDRAYVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSE 239
Query: 794 LSETPPDPALPKPAINPPRVSQ-------------------------------------- 729
LSE P DPA + PP +
Sbjct: 240 LSEKPLDPAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCL 299
Query: 728 -----GMGREPSKDVEMKRGDWICPNCTFMNFARNIRCLECKADGPNRVNIDDIDKKKGD 564
G R D+EMK GDWICP C FMNF+RNIRC++CK +GP +VN++ + KKGD
Sbjct: 300 KCNEDGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGD 359
Query: 563 WTCPQCQFMNFARNTKCIRPHCGEPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKP 384
W CPQC FMNFA N KC+R C E RPKR+L GEWECP C ++N+R N C KC+ ++P
Sbjct: 360 WVCPQCSFMNFASNKKCLR--CRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERP 417
Query: 383 KDEVA-EYEDIIWKRPR 336
+ E++ EYE+ +W+ PR
Sbjct: 418 EQEISDEYEEQLWESPR 434
>ref|XP_004137347.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Cucumis
sativus]
Length = 445
Score = 378 bits (971), Expect = e-102
Identities = 200/437 (45%), Positives = 263/437 (60%), Gaps = 50/437 (11%)
Frame = -2
Query: 1496 PLFTKTPSSISKTHVLLPLPYSFISK-PLILKSYTTASEAIDTLTDNDGSS-----ETTS 1335
P F ++IS+T P+ F + P S+ S + T+ D+ GS + S
Sbjct: 4 PKFLYMGTAISRTTSRALSPFLFPRRLPSKFISFMKCSSS--TVLDSVGSGGADAPQPHS 61
Query: 1334 FSYSHPWPEWVSFIEKLNSNGYFDKSLLPXXXXXXXXXXXXXDAVIGTTNRDLNKLRNAS 1155
HPWPEWVSF++ L + GY + VI + D+N L++A
Sbjct: 62 TLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYS--DMNVLKDAC 119
Query: 1154 LTFSRDRFDIFRSLSREHIQTMVECGCPSLFRKAVNSAKRLRAFLKLDEGDVCSACNLRG 975
++F+RDRFDIF+SLS + IQT+V+ GCP+L RKAVNSAKRLRA+++LDEGDVCS CNLRG
Sbjct: 120 VSFARDRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRG 179
Query: 974 SCDRAYGILKDSEASARTVDIVRMLLIYALDPIVLSGEEKPHGREQIEASARKLLSELVE 795
SCDRAY ILK ++ +ARTVD+ R+LL YALDP+VLSG +KP GRE +E S RKLLS+L E
Sbjct: 180 SCDRAYVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSE 239
Query: 794 LSETPPDPALPKPAINPPRVSQ-------------------------------------- 729
LSE P DPA + PP +
Sbjct: 240 LSEKPIDPAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCL 299
Query: 728 -----GMGREPSKDVEMKRGDWICPNCTFMNFARNIRCLECKADGPNRVNIDDIDKKKGD 564
G R D+EMK GDWICP C FMNF+RNIRC++CK +GP +VN++ + KKGD
Sbjct: 300 KCNEDGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGD 359
Query: 563 WTCPQCQFMNFARNTKCIRPHCGEPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKP 384
W CPQC FMNFA N KC+R C E RPKR+L GEWECP C ++N+R N C KC+ ++P
Sbjct: 360 WVCPQCSFMNFASNKKCLR--CRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERP 417
Query: 383 KDEVA-EYEDIIWKRPR 336
+ E++ EYE+ +W+ PR
Sbjct: 418 EQEISDEYEEQLWESPR 434
>ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago truncatula]
gi|355494836|gb|AES76039.1| E3 SUMO-protein ligase RanBP2
[Medicago truncatula]
Length = 470
Score = 358 bits (919), Expect = 2e-96
Identities = 196/403 (48%), Positives = 240/403 (59%), Gaps = 51/403 (12%)
Frame = -2
Query: 1439 PYSFISKPLILKSYTTASEAIDTLTDNDGSSETTSFSYSHPWPEWVSFIEKLNSNGYFDK 1260
P+ F PL + T+ A T T + E + S HPWPEW+SF+++L + GY K
Sbjct: 29 PFLFFKPPLHHHRHQTSFSAFSTSTA--AAEEESLSSTVHPWPEWISFVDRLRAKGYLSK 86
Query: 1259 SLLPXXXXXXXXXXXXXDAVIGTTNRDLNKLRNASLTFSRDRFDIFRSLSREHIQTMVEC 1080
S A + D+N L++ASL+F+RDR+D+F+ LS E IQ +VE
Sbjct: 87 S-----------------ADDNSVYSDINLLKDASLSFARDRYDVFKLLSSEDIQAVVED 129
Query: 1079 GCPSLFRKAVNSAKRLRAFLKLDEGDVCSACNLRGSCDRAYGILKDSEASARTVDIVRML 900
GCP+ RKAVNSAKRLRA L+LDEGDVCSACNLRGSCDRAY ILK+SEA ARTVDIVR+L
Sbjct: 130 GCPNFLRKAVNSAKRLRAHLRLDEGDVCSACNLRGSCDRAYVILKESEADARTVDIVRIL 189
Query: 899 LIYALDPIVLSGEEKPHGREQIEASARKLLSELVELSE-TPPDPALP--------KPAIN 747
L YA+DP+VLSG EKP GRE IE+SARKLLS+L+ELSE +PP P LP K
Sbjct: 190 LFYAIDPLVLSGGEKPPGREVIESSARKLLSQLIELSEWSPPPPPLPAYSKSTSQKDVSK 249
Query: 746 PPRVSQGMGREPSKDVEMKR---------------------------------------G 684
+S SK+VEMK+ G
Sbjct: 250 VKPLSFKAAEMLSKNVEMKKGDWVCQKCNFMNFSRNRKCLNCEEDGPKSDDPRTFEMKEG 309
Query: 683 DWICPNCTFMNFARNIRCLECKADGPNRVN---IDDIDKKKGDWTCPQCQFMNFARNTKC 513
DWIC C FMNF+RNI CLECK +GP RVN +++ KKGDWTCPQC FMNFA N KC
Sbjct: 310 DWICTECNFMNFSRNITCLECKTEGPKRVNRLDTNEVQMKKGDWTCPQCGFMNFASNVKC 369
Query: 512 IRPHCGEPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKP 384
+ C EPRPK+ PG+W CPKCDF+N+ C +C P
Sbjct: 370 FK--CPEPRPKK--HPGDWSCPKCDFMNFASKDKCFRCQESNP 408
>ref|NP_001051041.1| Os03g0708900 [Oryza sativa Japonica Group]
gi|108710694|gb|ABF98489.1| Zn-finger in Ran binding
protein and others containing protein, expressed [Oryza
sativa Japonica Group] gi|113549512|dbj|BAF12955.1|
Os03g0708900 [Oryza sativa Japonica Group]
gi|215707047|dbj|BAG93507.1| unnamed protein product
[Oryza sativa Japonica Group] gi|218193617|gb|EEC76044.1|
hypothetical protein OsI_13224 [Oryza sativa Indica
Group] gi|222625654|gb|EEE59786.1| hypothetical protein
OsJ_12297 [Oryza sativa Japonica Group]
Length = 504
Score = 354 bits (909), Expect = 3e-95
Identities = 173/342 (50%), Positives = 222/342 (64%), Gaps = 26/342 (7%)
Frame = -2
Query: 1322 HPWPEWVSFIEKLNSNGYFDKSLLPXXXXXXXXXXXXXDAVIGTT-------------NR 1182
HPWPEW F+EKL + GYF++ L A ++
Sbjct: 58 HPWPEWGDFLEKLRAKGYFEQPTLASRADAAEGEVAATAAAAAAAAGEDPGASADNYPSK 117
Query: 1181 DLNKLRNASLTFSRDRFDIFRSLSREHIQTMVECGCPSLFRKAVNSAKRLRAFLKLDEGD 1002
DLN+L+NA L F R+RFD+ L ++ I+ +VECGCP++FRK VNSAKRLR FL++DEGD
Sbjct: 118 DLNRLKNACLKFGRERFDLLSVLPKQDIRAIVECGCPNIFRKPVNSAKRLREFLQIDEGD 177
Query: 1001 VCSACNLRGSCDRAYGILKDSEASARTVDIVRMLLIYALDPIVLSGEEKPHGREQIEASA 822
CSAC LRGSCD+AY ++ ++E ARTVD++R+LL YA+DP LSGE +G ++ SA
Sbjct: 178 ACSACKLRGSCDKAY-VIPNAEDEARTVDVMRILLNYAIDPTSLSGENSVNG--GVQESA 234
Query: 821 RKLLSELVELSETPPDPALPKP-------------AINPPRVSQGMGREPSKDVEMKRGD 681
RKLLSEL LS+T DP++PKP I P+ S G GRE + + EMK+GD
Sbjct: 235 RKLLSELTMLSDTTIDPSIPKPVFQTSSKTKTFDKGIAKPKFSAGKGRE-TTETEMKKGD 293
Query: 680 WICPNCTFMNFARNIRCLECKADGPNRVNIDDIDKKKGDWTCPQCQFMNFARNTKCIRPH 501
W+CPNC F+NFARN CLECKADGP ++ + K GDW CPQC FMNFARN C +
Sbjct: 294 WLCPNCNFLNFARNRHCLECKADGPKKIETATTEMKTGDWICPQCHFMNFARNKMCFK-- 351
Query: 500 CGEPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKPKDE 375
C E RPKR L PGEWECP C F+N+RRNK CLKC + P+++
Sbjct: 352 CEESRPKRQLIPGEWECPSCSFVNFRRNKVCLKCKHEGPEND 393