BLASTX nr result
ID: Coptis24_contig00010002
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010002 (632 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281677.1| PREDICTED: 65-kDa microtubule-associated pro... 136 4e-30 emb|CAN64202.1| hypothetical protein VITISV_016187 [Vitis vinifera] 136 4e-30 ref|XP_002521913.1| PLE, putative [Ricinus communis] gi|22353895... 134 2e-29 gb|ACQ90586.1| putative microtubule-associated protein [Eutrema ... 132 5e-29 ref|NP_001030945.1| microtubule-associated protein 6 [Arabidopsi... 127 2e-27 >ref|XP_002281677.1| PREDICTED: 65-kDa microtubule-associated protein 6 [Vitis vinifera] gi|297737577|emb|CBI26778.3| unnamed protein product [Vitis vinifera] Length = 599 Score = 136 bits (342), Expect = 4e-30 Identities = 74/101 (73%), Positives = 84/101 (83%), Gaps = 4/101 (3%) Frame = -3 Query: 291 EKRPT-LKEQLASIKPLVDNLRNKKEERMRQFADVRTQIEKISGEISGYN---NDMSCSN 124 EKR T LKEQLAS+ PLV++LR+KKEER++QFAD+R QIEKISGEISGYN N M Sbjct: 96 EKRSTSLKEQLASVTPLVEDLRSKKEERLKQFADIRAQIEKISGEISGYNHHTNTMIGCL 155 Query: 123 SKEENDLSLRKLNEHQTHLHSLQKEKSDRLNKVLEYVNEVH 1 + EE DLSLR LNE QTHL +LQKEKS+RLNKVLEYVNEVH Sbjct: 156 TLEEQDLSLRNLNECQTHLRTLQKEKSERLNKVLEYVNEVH 196 >emb|CAN64202.1| hypothetical protein VITISV_016187 [Vitis vinifera] Length = 601 Score = 136 bits (342), Expect = 4e-30 Identities = 74/101 (73%), Positives = 84/101 (83%), Gaps = 4/101 (3%) Frame = -3 Query: 291 EKRPT-LKEQLASIKPLVDNLRNKKEERMRQFADVRTQIEKISGEISGYN---NDMSCSN 124 EKR T LKEQLAS+ PLV++LR+KKEER++QFAD+R QIEKISGEISGYN N M Sbjct: 111 EKRSTSLKEQLASVTPLVEDLRSKKEERLKQFADIRAQIEKISGEISGYNHHTNTMIGCL 170 Query: 123 SKEENDLSLRKLNEHQTHLHSLQKEKSDRLNKVLEYVNEVH 1 + EE DLSLR LNE QTHL +LQKEKS+RLNKVLEYVNEVH Sbjct: 171 TLEEQDLSLRNLNECQTHLRTLQKEKSERLNKVLEYVNEVH 211 >ref|XP_002521913.1| PLE, putative [Ricinus communis] gi|223538951|gb|EEF40549.1| PLE, putative [Ricinus communis] Length = 600 Score = 134 bits (336), Expect = 2e-29 Identities = 69/103 (66%), Positives = 86/103 (83%), Gaps = 4/103 (3%) Frame = -3 Query: 297 RAEKRPT-LKEQLASIKPLVDNLRNKKEERMRQFADVRTQIEKISGEISGYNN---DMSC 130 + EKR + LK++LAS+ PLV++LR KKEERM+QFAD++ QIEKISGEISGYNN + Sbjct: 95 QTEKRASSLKQKLASVTPLVEDLRTKKEERMKQFADIKAQIEKISGEISGYNNLNSSLIS 154 Query: 129 SNSKEENDLSLRKLNEHQTHLHSLQKEKSDRLNKVLEYVNEVH 1 S S E+ DLSLRKLNE+QTHL +LQKEKSDRL+KV E++NEVH Sbjct: 155 SFSLEDQDLSLRKLNEYQTHLRTLQKEKSDRLHKVFEFINEVH 197 >gb|ACQ90586.1| putative microtubule-associated protein [Eutrema halophilum] Length = 608 Score = 132 bits (332), Expect = 5e-29 Identities = 67/97 (69%), Positives = 84/97 (86%), Gaps = 4/97 (4%) Frame = -3 Query: 279 TLKEQLASIKPLVDNLRNKKEERMRQFADVRTQIEKISGEISGYNNDMS----CSNSKEE 112 +LKE+LA++ PLV++LR +KEERM+QF+DV+ QIEKISGEISGY++ +S CS + EE Sbjct: 103 SLKEKLAAVTPLVEDLRIQKEERMKQFSDVKAQIEKISGEISGYSDHLSKTMICSLTLEE 162 Query: 111 NDLSLRKLNEHQTHLHSLQKEKSDRLNKVLEYVNEVH 1 DL+LRKLNE+QTHL +LQKEKSDRLNKVL YVNEVH Sbjct: 163 QDLTLRKLNEYQTHLRTLQKEKSDRLNKVLGYVNEVH 199 >ref|NP_001030945.1| microtubule-associated protein 6 [Arabidopsis thaliana] gi|330250423|gb|AEC05517.1| microtubule-associated protein 6 [Arabidopsis thaliana] Length = 567 Score = 127 bits (318), Expect = 2e-27 Identities = 65/97 (67%), Positives = 80/97 (82%), Gaps = 4/97 (4%) Frame = -3 Query: 279 TLKEQLASIKPLVDNLRNKKEERMRQFADVRTQIEKISGEISGY----NNDMSCSNSKEE 112 +LKE+LA++ PLV+ LR +KEERM+QF+D++ QIEKISGEISGY N M+ S + EE Sbjct: 62 SLKEKLAAVTPLVEELRIQKEERMKQFSDIKAQIEKISGEISGYSDHLNKAMNISLTLEE 121 Query: 111 NDLSLRKLNEHQTHLHSLQKEKSDRLNKVLEYVNEVH 1 DL+LR LNE+QTHL +LQKEKSDRLNKVL YVNEVH Sbjct: 122 QDLTLRNLNEYQTHLRTLQKEKSDRLNKVLGYVNEVH 158