BLASTX nr result

ID: Coptis24_contig00009987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009987
         (1757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282660.2| PREDICTED: uncharacterized protein LOC100267...   204   8e-50
emb|CBI16355.3| unnamed protein product [Vitis vinifera]              204   8e-50
ref|XP_002513492.1| conserved hypothetical protein [Ricinus comm...   179   3e-42
ref|XP_002313344.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-41
ref|XP_002299902.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-40

>ref|XP_002282660.2| PREDICTED: uncharacterized protein LOC100267248 [Vitis vinifera]
          Length = 507

 Score =  204 bits (518), Expect = 8e-50
 Identities = 140/316 (44%), Positives = 186/316 (58%), Gaps = 6/316 (1%)
 Frame = -1

Query: 1553 MSTI-RRARWH-AXXXXXPKILNIPRRHHRKTTTKQLPRNNTPLSD--IQRSTCRGKLES 1386
            MST  RR +WH +     P+ILN+P RH R+           P +D  ++RS  R KLE+
Sbjct: 1    MSTATRRLKWHPSPPTPSPRILNLPHRHRRRPP-------KPPAADFLLRRSCRRAKLET 53

Query: 1385 LFDQERVFSRTSVPIVLLNSFNDSXXXXXXXXXXXXXXXXXXXXXXXXKWRFQAEILRAE 1206
            LF QER FS+T VPIV+ +S                            +WR +AEILRAE
Sbjct: 54   LFHQERAFSKT-VPIVVFDS--GCERRERVEEGEEEEEVVAVAEAEEERWRVEAEILRAE 110

Query: 1205 CNFFRMERDIALKKLELNCVQTKRTLRSAVETLVSGKEKIHEGKKMSSVXXXXXXXXXXX 1026
            CNF RMER++A+KKLE + V  +  LRSAV+T++SGK+KI EGK +S+V           
Sbjct: 111  CNFLRMEREVAVKKLEKSRVHMESALRSAVQTIISGKKKICEGKSVSTVLEEEIEDLAEK 170

Query: 1025 XXXLQRSSGVRDFEFGKSSNFDKQANILQRKLEKLGSEGLLQNEDEKCV*EIRDMAESSL 846
               LQRSS  +DFE  K SNFDKQ ++LQR+LEKLG         +KCV EI+++AE+SL
Sbjct: 171  LEKLQRSSDAKDFEVKKCSNFDKQTSLLQRRLEKLG------GISDKCVKEIQEIAEASL 224

Query: 845  TIITSWNIDQCSEDDQE-NRFKDVEVLRRKMVKL*KG-MLERMEEECGSMIFXXXXXXXX 672
            +I TS ++ + S  ++  N+F DVE+LRRKM  L +G +LERM+EE GSM+         
Sbjct: 225  SINTSCSVGKSSVSNRRCNKFMDVEILRRKMEGLSRGVLLERMKEEYGSMLSTENCSIAS 284

Query: 671  XXXXSRRIEFPHLSSS 624
                SRRIE P  SSS
Sbjct: 285  SASTSRRIEAPDSSSS 300


>emb|CBI16355.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  204 bits (518), Expect = 8e-50
 Identities = 140/316 (44%), Positives = 186/316 (58%), Gaps = 6/316 (1%)
 Frame = -1

Query: 1553 MSTI-RRARWH-AXXXXXPKILNIPRRHHRKTTTKQLPRNNTPLSD--IQRSTCRGKLES 1386
            MST  RR +WH +     P+ILN+P RH R+           P +D  ++RS  R KLE+
Sbjct: 16   MSTATRRLKWHPSPPTPSPRILNLPHRHRRRPP-------KPPAADFLLRRSCRRAKLET 68

Query: 1385 LFDQERVFSRTSVPIVLLNSFNDSXXXXXXXXXXXXXXXXXXXXXXXXKWRFQAEILRAE 1206
            LF QER FS+T VPIV+ +S                            +WR +AEILRAE
Sbjct: 69   LFHQERAFSKT-VPIVVFDS--GCERRERVEEGEEEEEVVAVAEAEEERWRVEAEILRAE 125

Query: 1205 CNFFRMERDIALKKLELNCVQTKRTLRSAVETLVSGKEKIHEGKKMSSVXXXXXXXXXXX 1026
            CNF RMER++A+KKLE + V  +  LRSAV+T++SGK+KI EGK +S+V           
Sbjct: 126  CNFLRMEREVAVKKLEKSRVHMESALRSAVQTIISGKKKICEGKSVSTVLEEEIEDLAEK 185

Query: 1025 XXXLQRSSGVRDFEFGKSSNFDKQANILQRKLEKLGSEGLLQNEDEKCV*EIRDMAESSL 846
               LQRSS  +DFE  K SNFDKQ ++LQR+LEKLG         +KCV EI+++AE+SL
Sbjct: 186  LEKLQRSSDAKDFEVKKCSNFDKQTSLLQRRLEKLG------GISDKCVKEIQEIAEASL 239

Query: 845  TIITSWNIDQCSEDDQE-NRFKDVEVLRRKMVKL*KG-MLERMEEECGSMIFXXXXXXXX 672
            +I TS ++ + S  ++  N+F DVE+LRRKM  L +G +LERM+EE GSM+         
Sbjct: 240  SINTSCSVGKSSVSNRRCNKFMDVEILRRKMEGLSRGVLLERMKEEYGSMLSTENCSIAS 299

Query: 671  XXXXSRRIEFPHLSSS 624
                SRRIE P  SSS
Sbjct: 300  SASTSRRIEAPDSSSS 315


>ref|XP_002513492.1| conserved hypothetical protein [Ricinus communis]
            gi|223547400|gb|EEF48895.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 527

 Score =  179 bits (453), Expect = 3e-42
 Identities = 131/314 (41%), Positives = 177/314 (56%), Gaps = 5/314 (1%)
 Frame = -1

Query: 1547 TIRRARW-HAXXXXXPKILNIPRRHHRKTTTKQLPRNNTPLSDIQRSTCRGKLESLFDQE 1371
            T RR +W +      P+IL++PRR  RK   K     N      QR   +GKLE+LFDQE
Sbjct: 11   TARRPKWQYPPAAPTPRILHLPRRPRRKPQIKA----NAVKPSSQRDK-KGKLETLFDQE 65

Query: 1370 RVFSRTSVPIVLLNSFNDSXXXXXXXXXXXXXXXXXXXXXXXXKWRFQAEILRAECNFFR 1191
            R F+R  +PIV++                              KWRFQAE+LRAECN  R
Sbjct: 66   REFARGVLPIVMVTD-------QCQEGRRERVAERESVVMEEEKWRFQAEMLRAECNLLR 118

Query: 1190 MERDIALKKLELNCVQTKRTLRSAVETLVSGKEKIHEGKKMSSVXXXXXXXXXXXXXXLQ 1011
            MER+IA+KK+E    Q ++ L+SAV+TL+SG++KI +GK++S V              LQ
Sbjct: 119  MEREIAVKKMERRRAQVEKALKSAVQTLLSGRKKISDGKEVSMVLEEEIIKLVEKLEKLQ 178

Query: 1010 RSSGVR--DFEFGKSSNFDKQANILQRKLEKLGSEGLLQNEDEKCV*EIRDMAESSLTI- 840
            RSS  R  D E  K SNFD+QA+ LQR+LEK   E      DE CV EI++MAE+SL+I 
Sbjct: 179  RSSRSRNKDLEVRKCSNFDRQASHLQRRLEKFTGE-----PDEICVKEIQEMAEASLSIQ 233

Query: 839  ITSWNIDQCSEDDQENRFKDVEVLRRKMVKL*KG-MLERMEEECGSMIFXXXXXXXXXXX 663
            ITS    + +E+   N   ++E+LRR+M +L KG +LERME E GSM+            
Sbjct: 234  ITS----RANENFASNCSSNMEILRRRMERLSKGNLLERMEVEYGSMVSTSNSSASSSAA 289

Query: 662  XSRRIEFPHLSSSA 621
             S++ EFP +SSS+
Sbjct: 290  TSKQNEFPEISSSS 303


>ref|XP_002313344.1| predicted protein [Populus trichocarpa] gi|222849752|gb|EEE87299.1|
            predicted protein [Populus trichocarpa]
          Length = 504

 Score =  174 bits (440), Expect = 9e-41
 Identities = 127/312 (40%), Positives = 168/312 (53%), Gaps = 3/312 (0%)
 Frame = -1

Query: 1547 TIRRARW-HAXXXXXPKILNIPRRHHRKTTTKQLPRNNTPLSDIQRSTCRGKLESLFDQE 1371
            T RR +W +      P+IL++PRR  RK    Q+P+ N      QR   +GKLE+LFDQE
Sbjct: 11   TTRRPKWQYPPAQPTPRILHLPRRPRRKP---QVPKANATKPSSQRDE-KGKLEALFDQE 66

Query: 1370 RVFSRTSVPIVLLNSFNDSXXXXXXXXXXXXXXXXXXXXXXXXKWRFQAEILRAECNFFR 1191
            R F+R  VPI++ +                             KWRFQAE+LRAECN  R
Sbjct: 67   RGFARGVVPIMMASG--SRGYQCFEEERRERVEERESVVMEEEKWRFQAEMLRAECNLLR 124

Query: 1190 MERDIALKKLELNCVQTKRTLRSAVETLVSGKEKIHEGKKMSSVXXXXXXXXXXXXXXLQ 1011
            MER+IA+KK+E   VQ +R LRSAVETL+SG++ I +GK  S V              LQ
Sbjct: 125  MEREIAVKKMERRRVQMERILRSAVETLLSGRKGICDGKDASMVLDEEIQELVEKLEKLQ 184

Query: 1010 RSSGVRDFEFGKSSNFDKQANILQRKLEKLGSEGLLQNEDEKCV*EIRDMAESSLTIITS 831
            R SGV+D E  K SN D+Q ++LQR L+  G E      DEKCV EI+++AE+S+     
Sbjct: 185  RRSGVKDLEGRKCSNLDRQVSLLQRGLKNFGGE-----SDEKCVKEIQEVAEASI----- 234

Query: 830  WNIDQCSEDDQENRFKDVEVLRRKMVKL-*KGMLERMEEECGSMIFXXXXXXXXXXXXSR 654
                      +EN  + +E+LRRKM  L  + +LERME+E GSM              S+
Sbjct: 235  ----------EENNVQQMEILRRKMEGLSNRSLLERMEDEYGSMHSTASSSAANYASSSK 284

Query: 653  R-IEFPHLSSSA 621
            R IEFP   SS+
Sbjct: 285  RIIEFPDKPSSS 296


>ref|XP_002299902.1| predicted protein [Populus trichocarpa] gi|222847160|gb|EEE84707.1|
            predicted protein [Populus trichocarpa]
          Length = 494

 Score =  172 bits (437), Expect = 2e-40
 Identities = 118/285 (41%), Positives = 161/285 (56%), Gaps = 2/285 (0%)
 Frame = -1

Query: 1547 TIRRARW-HAXXXXXPKILNIPRRHHRKTTTKQLPRNNTPLSDIQRSTCRGKLESLFDQE 1371
            T RR +W +      P+IL++PRR  RK    Q+P++N      QR   +GKLE LFDQE
Sbjct: 11   TSRRPKWQYPPAQPTPRILHLPRRPRRK----QVPKSNASKPSSQRDR-KGKLEVLFDQE 65

Query: 1370 RVFSRTSVPIVLLNSFNDSXXXXXXXXXXXXXXXXXXXXXXXXKWRFQAEILRAECNFFR 1191
            R F+R ++PI+++                               WRFQAE+LRAECN  R
Sbjct: 66   RGFARGAMPILMVGGIRGDQCLEEERRERVEERESVVMEEEK--WRFQAEMLRAECNLLR 123

Query: 1190 MERDIALKKLELNCVQTKRTLRSAVETLVSGKEKIHEGKKMSSVXXXXXXXXXXXXXXLQ 1011
            MER+IA+KK+E   VQ +R LRSAV  L+S ++ I +GK +  V              L+
Sbjct: 124  MEREIAVKKMERRRVQMERILRSAVRALLSVRKGICDGKDVRMVLDEEIQELIEKLERLE 183

Query: 1010 RSSGVRDFEFGKSSNFDKQANILQRKLEKLGSEGLLQNEDEKCV*EIRDMAESSLTIITS 831
            R SGV+D E  K SN D+Q +IL+R+LEK G E      DE CV EI++MAE+SL+I T+
Sbjct: 184  RRSGVKDLEGRKCSNLDRQVSILRRRLEKFGGE-----SDEICVKEIQEMAEASLSIKTN 238

Query: 830  WNIDQCSEDDQENRFKDVEVLRRKMVKL*KG-MLERMEEECGSMI 699
                      +EN  + +E+LRRKM  L  G +LERME+E GSM+
Sbjct: 239  C---------KENNVQQMEMLRRKMEGLSNGSLLERMEDEYGSML 274


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