BLASTX nr result

ID: Coptis24_contig00009950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009950
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat...   226   1e-57
emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]   224   7e-57
ref|XP_002533336.1| pentatricopeptide repeat-containing protein,...   218   5e-55
ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|2...   214   7e-54
ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat...   199   2e-49

>ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  226 bits (577), Expect = 1e-57
 Identities = 112/183 (61%), Positives = 139/183 (75%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFA 182
           +KC R+ DA+ VF+ I  RN+V+WNALI+G+ Q+GDR  AF LL CME E V  DDGTFA
Sbjct: 146 AKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFA 205

Query: 183 SLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGI 362
            LLTLLDDP  +KLTTQ+HAK++K     D T  NA I+AYSECGS+ED++RVF+ A+  
Sbjct: 206 PLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIET 265

Query: 363 RDLVTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQGKSL 542
           RDLVTWNSMLAAY+V +    A++LF+EMQ LG   D+YTYTSVIS++    HQ QGKSL
Sbjct: 266 RDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSL 325

Query: 543 HGL 551
           HGL
Sbjct: 326 HGL 328



 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 56/181 (30%), Positives = 96/181 (53%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFA 182
           +KCG I  A  +F    +R+AVSWN +IAGFV LG+   A   L  M++   + D  +F 
Sbjct: 45  AKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFG 104

Query: 183 SLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGI 362
           S+L  +    + ++  Q+H+ ++K     +V A +A +  Y++C  VED+  VF K++ I
Sbjct: 105 SILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVF-KSINI 163

Query: 363 RDLVTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQGKSL 542
           R+ VTWN++++ Y        A+ L   M+  G+  D  T+  +++    PD       +
Sbjct: 164 RNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQV 223

Query: 543 H 545
           H
Sbjct: 224 H 224



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 44/160 (27%), Positives = 80/160 (50%)
 Frame = +3

Query: 24  DAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFASLLTLLD 203
           +A  +FE +  ++ VSWN+++ GF Q G    A +    M  + V  D   F+++L    
Sbjct: 358 EALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCS 417

Query: 204 DPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGIRDLVTWN 383
           D    +L  Q+H  V+K     +    ++ I  YS+CG +ED+++ F+ A      + WN
Sbjct: 418 DLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFD-ATPKDSSIAWN 476

Query: 384 SMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISS 503
           S++  Y     G +A  LF  M+   +  D  T+ +V+++
Sbjct: 477 SLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTA 516



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFE-YIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTF 179
           S+CG I DA  VF+  I  R+ V+WN+++A ++       AF+L   M+     PD  T+
Sbjct: 247 SECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTY 306

Query: 180 ASLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAY--SECGSVEDSKRVFEKA 353
            S+++   +         +H  VIK      V   N+ I+ Y  S   S++++  +FE +
Sbjct: 307 TSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFE-S 365

Query: 354 VGIRDLVTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQG 533
           +  +D V+WNS+L  +        A K F  M+   +V D Y +++V+ S +       G
Sbjct: 366 LENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLG 425

Query: 534 KSLHGL 551
           + +H L
Sbjct: 426 QQVHVL 431


>emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  224 bits (571), Expect = 7e-57
 Identities = 111/183 (60%), Positives = 138/183 (75%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFA 182
           +KC R+ DA+ VF+ I  RN+V+WNALI+G+  +GDR  AF LL CME E V  DDGTFA
Sbjct: 146 AKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDDGTFA 205

Query: 183 SLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGI 362
            LLTLLDDP  +KLTTQ+HAK++K     D T  NA I+AYSECGS+ED++RVF+ A+  
Sbjct: 206 PLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIET 265

Query: 363 RDLVTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQGKSL 542
           RDLVTWNSMLAAY+V +    A++LF+EMQ LG   D+YTYTSVIS++    HQ QGKSL
Sbjct: 266 RDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSL 325

Query: 543 HGL 551
           HGL
Sbjct: 326 HGL 328



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 1/182 (0%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFA 182
           +KCG I  A  +F+   +R+AVSWN +IAG V  G+   A   L  M++   + D  +F 
Sbjct: 45  AKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFG 104

Query: 183 SLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGI 362
           S+L  +    + ++  Q+H+ ++K     +V A +A +  Y++C  VED+  VF K++ I
Sbjct: 105 SILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVEDAFEVF-KSINI 163

Query: 363 RDLVTWNSMLAAYV-VRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQGKS 539
           R+ VTWN++++ Y  V D G  A+ L   M+  G+  D  T+  +++    PD       
Sbjct: 164 RNSVTWNALISGYAHVGDRGT-AFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQ 222

Query: 540 LH 545
           +H
Sbjct: 223 VH 224



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 3/186 (1%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFE-YIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTF 179
           S+CG I DA  VF+  I  R+ V+WN+++A ++       AF L   M+     PD  T+
Sbjct: 247 SECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTY 306

Query: 180 ASLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAY--SECGSVEDSKRVFEKA 353
            S+++   +         +H  VIK      V   N+ I+ Y  S   S++++  +FE +
Sbjct: 307 TSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFE-S 365

Query: 354 VGIRDLVTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQG 533
           +  +D V+WNS+L  +        A K F  M+   +V D Y +++V+ S +       G
Sbjct: 366 LENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLG 425

Query: 534 KSLHGL 551
           + +H L
Sbjct: 426 QQVHVL 431



 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 39/160 (24%), Positives = 70/160 (43%)
 Frame = +3

Query: 24  DAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFASLLTLLD 203
           +A  +FE +  ++ VSWN+++ GF Q G    A +    M  + V  D   F+++L    
Sbjct: 358 EALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCS 417

Query: 204 DPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGIRDLVTWN 383
           D    +L  Q+H                        CG +ED+++ F+ A      + WN
Sbjct: 418 DLATLQLGQQVHVL----------------------CGVIEDARKSFD-ATPKDSSIAWN 454

Query: 384 SMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISS 503
           S++  Y     G +A  LF  M+   +  D  T+ +V+++
Sbjct: 455 SLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTA 494


>ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526827|gb|EEF29045.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score =  218 bits (555), Expect = 5e-55
 Identities = 108/183 (59%), Positives = 139/183 (75%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFA 182
           +KC R+ DA+ VF+ IP RN+VSWNALIAGFV  GD   AF LL CME+E V  DDGTF+
Sbjct: 148 AKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFS 207

Query: 183 SLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGI 362
            LLTLLD+ +FYKLT Q+H K+IK     D T  NATI++YS+CGS+ED++RVF+ AVG 
Sbjct: 208 PLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGS 267

Query: 363 RDLVTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQGKSL 542
           RDLVTWNSMLAA++  D    A+KLF++MQ+ G   D+YTYT++IS+ +   H++ GKSL
Sbjct: 268 RDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACS---HKDNGKSL 324

Query: 543 HGL 551
           HGL
Sbjct: 325 HGL 327



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 51/173 (29%), Positives = 85/173 (49%)
 Frame = +3

Query: 24  DAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFASLLTLLD 203
           DA  VF  +  ++ VSWN+++ GF Q G    A +L   M    V  D   F+++L    
Sbjct: 357 DALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCS 416

Query: 204 DPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGIRDLVTWN 383
           D    +L  QIH   +K     +    ++ I  YS+CG +ED+++ FEK       +TWN
Sbjct: 417 DLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAK-DSSITWN 475

Query: 384 SMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQGKSL 542
           S++ AY     G +A  LF +M+   +  D  T+ + +++ +      QG+ L
Sbjct: 476 SIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYL 528



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 3/186 (1%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFE-YIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTF 179
           S+CG + DA  VF+  +  R+ V+WN+++A F+    +  AF+L   M++    PD  T+
Sbjct: 249 SQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTY 308

Query: 180 ASLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAY--SECGSVEDSKRVFEKA 353
            ++++        K    +H  VIK      V   NA I+ Y  S   S+ED+  VF  +
Sbjct: 309 TTIISACSHKDNGK---SLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFH-S 364

Query: 354 VGIRDLVTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQG 533
           +  +D V+WNS+L  +    H   A KLF+ M+   +  D Y +++V+ S +       G
Sbjct: 365 MESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLG 424

Query: 534 KSLHGL 551
           + +H L
Sbjct: 425 QQIHVL 430



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/163 (27%), Positives = 85/163 (52%)
 Frame = +3

Query: 12  GRIWDAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFASLL 191
           G +  A  +F+ +  R+ V+WN +I+G+V  G    A+ L   M+   + PD  TF S+L
Sbjct: 50  GGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSIL 109

Query: 192 TLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGIRDL 371
             +       +  Q+H+ ++K      V A +A +  Y++C  V D+  VF K +  R+ 
Sbjct: 110 KGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVF-KCIPRRNS 168

Query: 372 VTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVIS 500
           V+WN+++A +V+      A+ L   M+  G+  D  T++ +++
Sbjct: 169 VSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLT 211



 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
 Frame = +3

Query: 237 HAKVIKFDRVCDVTALNATISAYSEC--GSVEDSKRVFEKAVGIRDLVTWNSMLAAYVVR 410
           H + IK  R  D+ A N  +S Y+ C  G +  +  +F++ +  RD VTWN+M++ YV  
Sbjct: 22  HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDE-MSHRDTVTWNTMISGYVNS 80

Query: 411 DHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQGKSLHGL 551
                A++L+  M+  G++ D YT+ S++         + G+ +H L
Sbjct: 81  GSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSL 127


>ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|222853273|gb|EEE90820.1|
           predicted protein [Populus trichocarpa]
          Length = 711

 Score =  214 bits (545), Expect = 7e-54
 Identities = 109/183 (59%), Positives = 130/183 (71%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFA 182
           +KC R+ DAY VF+ +P RN VSWNALI GFVQ+GDR  AF LL CM+KE V  +DGTFA
Sbjct: 148 AKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFA 207

Query: 183 SLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGI 362
            LLTLLD  +FYKLT Q+H K+IK          NAT++AYSECG +ED+KRVF+ AVG 
Sbjct: 208 PLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGT 267

Query: 363 RDLVTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQGKSL 542
           RDLVTWNSML AY+V D    A+ LF+EMQ  G   D+YTYT VIS+     H+N GKS 
Sbjct: 268 RDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSF 327

Query: 543 HGL 551
           H L
Sbjct: 328 HAL 330



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 48/170 (28%), Positives = 83/170 (48%)
 Frame = +3

Query: 27  AYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFASLLTLLDD 206
           A  +F  +  ++ VSWN+++ GF Q+G    A +L G M       DD  ++++L    D
Sbjct: 361 ALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSD 420

Query: 207 PRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGIRDLVTWNS 386
               +L  QIH   +K     +    ++ I  YS+CG +ED+ + FE        +TWNS
Sbjct: 421 LAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTK-ESSITWNS 479

Query: 387 MLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQGK 536
           ++ AY     G +A  LF  M+   +  D  T+ +V+++ +      QG+
Sbjct: 480 IMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGR 529



 Score = 78.2 bits (191), Expect = 8e-13
 Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
 Frame = +3

Query: 3   SKC--GRIWDAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGT 176
           SKC  G +  A  +F+ +P ++ V+WN +I G+V+ G+   A+  L  M++     D  T
Sbjct: 45  SKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYT 104

Query: 177 FASLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAV 356
           F S+L  +     + L  Q+H+ ++K      V A +A +  Y++C  VED+  VF+  +
Sbjct: 105 FGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQ-GM 163

Query: 357 GIRDLVTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQGK 536
            +R+ V+WN+++  +V       A+ L   MQ+ G+  +  T+  +++   G        
Sbjct: 164 PVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTM 223

Query: 537 SLH 545
            LH
Sbjct: 224 QLH 226


>ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Glycine max]
          Length = 703

 Score =  199 bits (506), Expect = 2e-49
 Identities = 96/183 (52%), Positives = 129/183 (70%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFA 182
           +KCGR+ D Y VF+ +PERN VSWN L+A + ++GD  MAF +L CME E V  DDGT +
Sbjct: 140 AKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDDGTVS 199

Query: 183 SLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGI 362
            LLTLLD+  FYKLT Q+H K++K       T  NATI+AYSEC S++D++RVF+ AV  
Sbjct: 200 PLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDGAVLC 259

Query: 363 RDLVTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQGKSL 542
           RDLVTWNSML AY++ +   LA+K+F++MQ  G   D YTYT ++ + +  +H+  GK L
Sbjct: 260 RDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCL 319

Query: 543 HGL 551
           HGL
Sbjct: 320 HGL 322



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 45/133 (33%), Positives = 80/133 (60%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFA 182
           +KC  +  A+ VF+ +P R+ VSWNA+I+ F   GD    ++LLG M + + + D  TF 
Sbjct: 39  AKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFG 98

Query: 183 SLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGI 362
           S+L  +      KL  Q+H+ ++K     +V + +A +  Y++CG V+D   VF+ ++  
Sbjct: 99  SILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQ-SMPE 157

Query: 363 RDLVTWNSMLAAY 401
           R+ V+WN+++A+Y
Sbjct: 158 RNYVSWNTLVASY 170



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/160 (27%), Positives = 81/160 (50%)
 Frame = +3

Query: 24  DAYAVFEYIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTFASLLTLLD 203
           DA  +F  +  ++  +WN+++AG+VQ+G    A RL   M    +  D  TF++++    
Sbjct: 352 DALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCS 411

Query: 204 DPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGSVEDSKRVFEKAVGIRDLVTWN 383
           D    +L  Q H   +K     +    ++ I  YS+CG +ED+++ FE A    + + WN
Sbjct: 412 DLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFE-ATSKDNAIVWN 470

Query: 384 SMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISS 503
           S++  Y     G +A  LF  M+   +  D  T+ +V+++
Sbjct: 471 SIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTA 510



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 3/187 (1%)
 Frame = +3

Query: 3   SKCGRIWDAYAVFE-YIPERNAVSWNALIAGFVQLGDRRMAFRLLGCMEKESVSPDDGTF 179
           S+C  + DA  VF+  +  R+ V+WN+++  ++      +AF++   M+     PD  T+
Sbjct: 241 SECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTY 300

Query: 180 ASLLTLLDDPRFYKLTTQIHAKVIKFDRVCDVTALNATISAYSECGS--VEDSKRVFEKA 353
             ++              +H  VIK      V   NA IS Y       +ED+ R+F  +
Sbjct: 301 TGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFF-S 359

Query: 354 VGIRDLVTWNSMLAAYVVRDHGALAYKLFIEMQRLGIVGDLYTYTSVISSSTGPDHQNQG 533
           + ++D  TWNS+LA YV       A +LF++M+ L I  D YT+++VI S +       G
Sbjct: 360 MDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLG 419

Query: 534 KSLHGLA 554
           +  H LA
Sbjct: 420 QQFHVLA 426


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