BLASTX nr result

ID: Coptis24_contig00009931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009931
         (1500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEW69783.1| Hop-interacting protein THI008 [Solanum lycopersi...   256   1e-65
ref|XP_002522687.1| GATA transcription factor, putative [Ricinus...   241   3e-61
emb|CBI38230.3| unnamed protein product [Vitis vinifera]              231   3e-58
ref|XP_002270361.1| PREDICTED: GATA transcription factor 24 [Vit...   231   3e-58
gb|ADL36691.1| GATA domain class transcription factor [Malus x d...   225   3e-56

>gb|AEW69783.1| Hop-interacting protein THI008 [Solanum lycopersicum]
          Length = 317

 Score =  256 bits (654), Expect = 1e-65
 Identities = 137/233 (58%), Positives = 166/233 (71%)
 Frame = -3

Query: 1240 DDIPSDSAYFTFPNNHSDQQLGESPDQLSISFQGEVFVYDSVPPEKVQAVLLLLGGYGIP 1061
            + +P +S Y       S+   G S DQL++SF+GEVFVYD+V PEKVQAVLLLLGGY +P
Sbjct: 79   EGVPHNSLYVP----GSEMVGGGSSDQLTLSFRGEVFVYDAVSPEKVQAVLLLLGGYEVP 134

Query: 1060 SGVPSVTVASKKRRGSVETAGGVNTPNRAASLLRFREKRKELNYDKKIRYNVRKEVALRM 881
            +G+P+V +AS+  R S E  G +N P RAASL RFREKRKE  +DKKIRY VRKEVALRM
Sbjct: 135  AGIPTVNMASQSHRASSEGPGRLNQPQRAASLSRFREKRKERCFDKKIRYTVRKEVALRM 194

Query: 880  QRRKGQFMSSKVRPEGMPPASSSWSAEGNPGRDASLPEIICTHCGTSSKFTPMMRRGPGG 701
            QR+KGQF SSK     +   ++S SAEGN G      E +C HCGTSSK TPMMRRGP G
Sbjct: 195  QRKKGQFTSSKT----VSDEAASSSAEGNAGSSQEEQETLCRHCGTSSKSTPMMRRGPAG 250

Query: 700  PRTLCNACGLTWANKGELRPISKVTTVGGQKAVQVNFTVQSATIQNEADDSDI 542
            PR+LCNACGLTWANKG LR +SKV+T G Q+      +V+S+    EAD SD+
Sbjct: 251  PRSLCNACGLTWANKGILRDLSKVSTTGAQE-----LSVKSSEQNGEADGSDV 298


>ref|XP_002522687.1| GATA transcription factor, putative [Ricinus communis]
            gi|223538163|gb|EEF39774.1| GATA transcription factor,
            putative [Ricinus communis]
          Length = 311

 Score =  241 bits (616), Expect = 3e-61
 Identities = 122/189 (64%), Positives = 141/189 (74%)
 Frame = -3

Query: 1177 GESPDQLSISFQGEVFVYDSVPPEKVQAVLLLLGGYGIPSGVPSVTVASKKRRGSVETAG 998
            G S DQL++SFQGEV+V+D+V P+KVQAVLLLLGGY IPSG+P+    S  +RG  + +G
Sbjct: 82   GGSSDQLTLSFQGEVYVFDAVSPDKVQAVLLLLGGYEIPSGIPTTETVSLNQRGYTDLSG 141

Query: 997  GVNTPNRAASLLRFREKRKELNYDKKIRYNVRKEVALRMQRRKGQFMSSKVRPEGMPPAS 818
                P+RAASL RFREKRKE  +DKKIRY VRKEVALRMQR+KGQF SSK   + M   S
Sbjct: 142  RSTQPHRAASLRRFREKRKERCFDKKIRYTVRKEVALRMQRKKGQFTSSKNSSDEMGSGS 201

Query: 817  SSWSAEGNPGRDASLPEIICTHCGTSSKFTPMMRRGPGGPRTLCNACGLTWANKGELRPI 638
            S WS     G+D SL E  CTHCG SSK TPMMRRGP GPRTLCNACGL WANKG LR +
Sbjct: 202  SLWSGPQGSGQDESLMETSCTHCGISSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDL 261

Query: 637  SKVTTVGGQ 611
            SK+ + G Q
Sbjct: 262  SKMPSAGIQ 270


>emb|CBI38230.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  231 bits (590), Expect = 3e-58
 Identities = 117/186 (62%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
 Frame = -3

Query: 1177 GESPDQLSISFQGEVFVYDSVPPEKVQAVLLLLGGYGIPSGVPSVTVASKKRRGSVETAG 998
            G   DQL++SFQGEV+V+D+V PEKVQAVLLLLGGY +P+G+P+  +    +RG  +  G
Sbjct: 29   GGGVDQLTLSFQGEVYVFDAVSPEKVQAVLLLLGGYEVPTGIPAPGMVPPNQRGLADFTG 88

Query: 997  GVNTPNRAASLLRFREKRKELNYDKKIRYNVRKEVALRMQRRKGQFMSSKVRPEGM-PPA 821
              + P RAASL RFREKRKE  +DKKIRY VRKEVALRMQR+KGQF SSK   + +   A
Sbjct: 89   RSSQPQRAASLSRFREKRKERCFDKKIRYTVRKEVALRMQRKKGQFTSSKASSDEVGGGA 148

Query: 820  SSSWSAEGNPGRDASLPEIICTHCGTSSKFTPMMRRGPGGPRTLCNACGLTWANKGELRP 641
            SS W+A    G+D   PEI+CTHCGTSSK TPMMRRGP GPR+LCNACGL WANKG LR 
Sbjct: 149  SSDWNAAHGSGQDE--PEILCTHCGTSSKTTPMMRRGPAGPRSLCNACGLKWANKGVLRD 206

Query: 640  ISKVTT 623
            +S+V++
Sbjct: 207  LSRVSS 212


>ref|XP_002270361.1| PREDICTED: GATA transcription factor 24 [Vitis vinifera]
          Length = 302

 Score =  231 bits (590), Expect = 3e-58
 Identities = 117/186 (62%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
 Frame = -3

Query: 1177 GESPDQLSISFQGEVFVYDSVPPEKVQAVLLLLGGYGIPSGVPSVTVASKKRRGSVETAG 998
            G   DQL++SFQGEV+V+D+V PEKVQAVLLLLGGY +P+G+P+  +    +RG  +  G
Sbjct: 77   GGGVDQLTLSFQGEVYVFDAVSPEKVQAVLLLLGGYEVPTGIPAPGMVPPNQRGLADFTG 136

Query: 997  GVNTPNRAASLLRFREKRKELNYDKKIRYNVRKEVALRMQRRKGQFMSSKVRPEGM-PPA 821
              + P RAASL RFREKRKE  +DKKIRY VRKEVALRMQR+KGQF SSK   + +   A
Sbjct: 137  RSSQPQRAASLSRFREKRKERCFDKKIRYTVRKEVALRMQRKKGQFTSSKASSDEVGGGA 196

Query: 820  SSSWSAEGNPGRDASLPEIICTHCGTSSKFTPMMRRGPGGPRTLCNACGLTWANKGELRP 641
            SS W+A    G+D   PEI+CTHCGTSSK TPMMRRGP GPR+LCNACGL WANKG LR 
Sbjct: 197  SSDWNAAHGSGQDE--PEILCTHCGTSSKTTPMMRRGPAGPRSLCNACGLKWANKGVLRD 254

Query: 640  ISKVTT 623
            +S+V++
Sbjct: 255  LSRVSS 260


>gb|ADL36691.1| GATA domain class transcription factor [Malus x domestica]
          Length = 294

 Score =  225 bits (573), Expect = 3e-56
 Identities = 119/208 (57%), Positives = 140/208 (67%)
 Frame = -3

Query: 1234 IPSDSAYFTFPNNHSDQQLGESPDQLSISFQGEVFVYDSVPPEKVQAVLLLLGGYGIPSG 1055
            IP +  Y              + DQL++SFQGEV+V+D+V P+KVQAVLLLLGGY IPSG
Sbjct: 47   IPPNQLYLPSSEYPPPAAANGASDQLTLSFQGEVYVFDAVSPDKVQAVLLLLGGYEIPSG 106

Query: 1054 VPSVTVASKKRRGSVETAGGVNTPNRAASLLRFREKRKELNYDKKIRYNVRKEVALRMQR 875
            +PS+      ++G  +       P RAASL RFREKRKE  +DKKIRY VRKEVALRMQR
Sbjct: 107  IPSMGPVPLNQQGMNDLPAKPTQPQRAASLSRFREKRKERCFDKKIRYTVRKEVALRMQR 166

Query: 874  RKGQFMSSKVRPEGMPPASSSWSAEGNPGRDASLPEIICTHCGTSSKFTPMMRRGPGGPR 695
            +KGQF SSK   +   PASS+  +    G+D S+ E  CTHCG SSK TPMMRRGP GPR
Sbjct: 167  KKGQFTSSKASSDDGGPASSTQGS----GQDESMQETSCTHCGISSKSTPMMRRGPAGPR 222

Query: 694  TLCNACGLTWANKGELRPISKVTTVGGQ 611
            TLCNACGL WANKG L  + KV  VG Q
Sbjct: 223  TLCNACGLKWANKGSLTGVPKVLNVGIQ 250


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