BLASTX nr result
ID: Coptis24_contig00009875
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009875
(2222 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512489.1| 3-5 exonuclease, putative [Ricinus communis]... 669 0.0
ref|XP_002330186.1| predicted protein [Populus trichocarpa] gi|2... 665 0.0
ref|XP_002278277.1| PREDICTED: uncharacterized protein LOC100254... 661 0.0
ref|XP_004167136.1| PREDICTED: uncharacterized LOC101205010 [Cuc... 641 0.0
ref|XP_004135767.1| PREDICTED: uncharacterized protein LOC101205... 640 0.0
>ref|XP_002512489.1| 3-5 exonuclease, putative [Ricinus communis]
gi|223548450|gb|EEF49941.1| 3-5 exonuclease, putative
[Ricinus communis]
Length = 570
Score = 669 bits (1725), Expect = 0.0
Identities = 333/558 (59%), Positives = 426/558 (76%), Gaps = 5/558 (0%)
Frame = +3
Query: 183 MGVEESEGNDENNKNNSHEAWCINLHTFSDMSHVSPAVFIYLLKESYVRGTQKATAKFRA 362
MG+EE+ + K+ +++ I LH FSD+++VSP VF+YLLKE Y+ G+ KAT KFRA
Sbjct: 1 MGLEETI---DIKKDKANQTLTICLHAFSDLTYVSPVVFLYLLKECYIHGSCKATKKFRA 57
Query: 363 LQQQVRQLLHNSPCPGPATFVVQCLFVLPILGELYTEGFGHLVISSFRR---VQTVPADL 533
LQQQV Q+L NSP GPATFV+ CL VLPI G LY+EGF HL++S+ RR + D
Sbjct: 58 LQQQVHQVLDNSPKSGPATFVIHCLHVLPIFG-LYSEGFSHLIVSALRRFLKLSPTSEDT 116
Query: 534 SEXXXXXXXXVLEIIGGNVIYGEIVLIKLLEAFDIRMGNIQKALCG-KEVNDDSVDSANT 710
+ L+I+GG V + E +LIK++EAFD+++ NI+ A+ K ND+ D+A
Sbjct: 117 LQAKGLAAQLFLDIVGGLVDHDERLLIKIVEAFDVKLTNIEAAIQRLKARNDNRFDTAKK 176
Query: 711 CIESFISRLIQSQSYPTAVALLERFSIRQSDQSFLLKMLQESQFTAAEKWAVFMGKPMIC 890
+E +I +L++SQSY TAV LLE FSIRQS QSFLLKM+ Q AAEKWA FMGKPM+C
Sbjct: 177 FVEQYIFKLVESQSYMTAVTLLEHFSIRQSGQSFLLKMMDNKQSQAAEKWATFMGKPMLC 236
Query: 891 AAIQKYIEMKMFRKAYKLIKDNNLQQEFSEAYHMCKESSLKRLAEKGCWDVAEAKTHNNK 1070
+Q+Y++ M + AY+ IK NNL++EF + YH CKES LK+LA+K WD+AEAKTH ++
Sbjct: 237 LLVQEYVDRNMLKHAYETIKKNNLKEEFPDIYHKCKESLLKKLAKKALWDLAEAKTHGDR 296
Query: 1071 QLLEYLVYLAMEAGYSEKIDELCERHSLKGFLNSKELETNAPTTRYLSFHELVAEDIIWV 1250
QL+EYLVYLAMEAGYSEK+DELC+R+SL+GFL KELE + P R+L +E EDI+WV
Sbjct: 297 QLVEYLVYLAMEAGYSEKVDELCDRYSLEGFLKGKELE-SLPHGRFLQLNEFAVEDIVWV 355
Query: 1251 DDVNSLLKATSCIEDCKVVGIDCEWKPNYEKGSKPNKVSIMQIASEKTAFIIDMLKLSEV 1430
D+V+ L AT IE CKVVG+DCEWKPN+EKGSKPNKVSIMQIAS+K FI D++KL E
Sbjct: 356 DEVDGLCGATGHIEGCKVVGLDCEWKPNFEKGSKPNKVSIMQIASDKMVFIFDLIKLFED 415
Query: 1431 DPTILDHCLKRILHSPSILKLGYNLQCDLKQLSHSY-KLECFKHYEMLLDLQNVFKEPNG 1607
P LD+CL RIL SP ILKLGYN QCD KQL+ SY +L+CFKHYEMLLD+QNV +EP G
Sbjct: 416 VPDTLDNCLTRILQSPRILKLGYNFQCDTKQLAQSYGELKCFKHYEMLLDIQNVCREPRG 475
Query: 1608 GLSGLAEKVLGAGLNKTRRNSNWEHRPLSQNQMEYAALDAAVLVHIFRHVRSQTNSCNVN 1787
GLSGLA+K+LGAGLNKTRRNSNWE RPLSQ+Q+EYAALDA VL+HIF H+R+ + +++
Sbjct: 476 GLSGLAKKLLGAGLNKTRRNSNWEQRPLSQHQLEYAALDAVVLIHIFHHIRNHSEPADIS 535
Query: 1788 DGETKLEWKSHIVSHMDD 1841
+G K++WKS+IVSHMD+
Sbjct: 536 EGHEKIKWKSYIVSHMDN 553
>ref|XP_002330186.1| predicted protein [Populus trichocarpa] gi|222871642|gb|EEF08773.1|
predicted protein [Populus trichocarpa]
Length = 552
Score = 665 bits (1717), Expect = 0.0
Identities = 335/553 (60%), Positives = 411/553 (74%), Gaps = 5/553 (0%)
Frame = +3
Query: 183 MGVEESEGNDENNKNNSHEAWCINLHTFSDMSHVSPAVFIYLLKESYVRGTQKATAKFRA 362
MG+EE ++K + I++HTFSD+++ SP VF+YLLKE Y GT KAT KFR
Sbjct: 1 MGIEEGVVELHDDKGKIDKKLTISVHTFSDLTYTSPVVFLYLLKECYAHGTCKATNKFRI 60
Query: 363 LQQQVRQLLHNSPCPGPATFVVQCLFVLPILGELYTEGFGHLVISSFRR---VQTVPADL 533
LQQ+V L NSP PGPATFVV CL+VLPI G L+ EGF HL+IS+ RR + + D
Sbjct: 61 LQQKVYHALENSPQPGPATFVVWCLYVLPIFG-LHCEGFSHLIISALRRFLNLAPISEDT 119
Query: 534 SEXXXXXXXXVLEIIGGNVIYGEIVLIKLLEAFDIRMGNIQKALCGKEVNDD-SVDSANT 710
S+ L+I+GG V + E +++K+LE FD+++ ++ +ALC V DD D+A T
Sbjct: 120 SKAKVIAARLFLDIVGGLVDHDERIVVKILEVFDVKLADVDEALCQLNVQDDYKPDTAKT 179
Query: 711 CIESFISRLIQSQSYPTAVALLERFSIRQSDQSFLLKMLQESQFTAAEKWAVFMGKPMIC 890
+E +I +LI SQSY TA +LLE FSIR S QSFL+KM+Q Q AAEKWA FMGK M+C
Sbjct: 180 LVEDYIFKLIDSQSYMTAASLLEHFSIRHSGQSFLVKMMQNKQSRAAEKWATFMGKSMLC 239
Query: 891 AAIQKYIEMKMFRKAYKLIKDNNLQQEFSEAYHMCKESSLKRLAEKGCWDVAEAKTHNNK 1070
A +Q+Y + M ++AY+ IK N+L+QEF + YH CKESSLK+LAEK WD+AEAKTH +K
Sbjct: 240 ALVQEYADQNMLKQAYETIKKNDLKQEFPDVYHKCKESSLKKLAEKALWDLAEAKTHGDK 299
Query: 1071 QLLEYLVYLAMEAGYSEKIDELCERHSLKGFLNSKELETNAPTTRYLSFHELVAEDIIWV 1250
QLLEYLVYLAMEA YSEK+DELCER+SL+GFLN KE E + ++YL EL E+IIWV
Sbjct: 300 QLLEYLVYLAMEACYSEKVDELCERYSLEGFLNVKESEGSVLQSKYLHLDELAVENIIWV 359
Query: 1251 DDVNSLLKATSCIEDCKVVGIDCEWKPNYEKGSKPNKVSIMQIASEKTAFIIDMLKLSEV 1430
D+V+ L A S IE CKVVG+DCEWKPNY KGSKPNKVSIMQIAS+KT FI D++KL E
Sbjct: 360 DEVDGLCAAISHIEGCKVVGLDCEWKPNYVKGSKPNKVSIMQIASDKTVFIFDLIKLFED 419
Query: 1431 DPTILDHCLKRILHSPSILKLGYNLQCDLKQLSHSY-KLECFKHYEMLLDLQNVFKEPNG 1607
P ILD+CL RIL SP ILKLGYN QCD+KQL+HSY +L CF +YE LLD+QNVFK+ G
Sbjct: 420 IPDILDNCLSRILQSPRILKLGYNFQCDIKQLAHSYGELRCFNNYEKLLDIQNVFKDARG 479
Query: 1608 GLSGLAEKVLGAGLNKTRRNSNWEHRPLSQNQMEYAALDAAVLVHIFRHVRSQTNSCNVN 1787
GLSGLAEK+LG GLNKTRRNSNWE RPL NQ+EYAALDAAVLVHIF H + + S
Sbjct: 480 GLSGLAEKILGTGLNKTRRNSNWELRPLGHNQLEYAALDAAVLVHIFHHFHNHSQSAGFP 539
Query: 1788 DGETKLEWKSHIV 1826
DG K+EWKSHIV
Sbjct: 540 DGHDKIEWKSHIV 552
>ref|XP_002278277.1| PREDICTED: uncharacterized protein LOC100254615 [Vitis vinifera]
gi|296089752|emb|CBI39571.3| unnamed protein product
[Vitis vinifera]
Length = 586
Score = 661 bits (1705), Expect = 0.0
Identities = 330/558 (59%), Positives = 425/558 (76%), Gaps = 5/558 (0%)
Frame = +3
Query: 183 MGVEESEGNDENNKNNSHEAWCINLHTFSDMSHVSPAVFIYLLKESYVRGTQKATAKFRA 362
MG+EE+ NNK+ +H+AW I +H++SD+S VSP VF+YLLKE Y GT ATAKF A
Sbjct: 1 MGLEETVTELHNNKDKTHQAWTICMHSYSDLSCVSPVVFLYLLKECYAYGTCTATAKFHA 60
Query: 363 LQQQVRQLLHNSPCPGPATFVVQCLFVLPILGELYTEGFGHLVISSFRRVQ---TVPADL 533
LQQ+V+Q+LHN+P PGPA F+ CL+VLP+ G Y+EGF HLVIS RR + DL
Sbjct: 61 LQQRVQQVLHNTPQPGPAIFIAHCLYVLPLFGS-YSEGFSHLVISGLRRFLKSGSSQEDL 119
Query: 534 SEXXXXXXXXVLEIIGGNVIYGEIVLIKLLEAFDIRMGNIQKALCGKEVNDDSV-DSANT 710
E L+I+ G V + E ++IK+LE FD+++ NI+K + + +DSV D+A
Sbjct: 120 LEARNVAAQLFLDIVAGFVNHDERIVIKVLEVFDVKLTNIEKVIGNSAMKNDSVLDAAKK 179
Query: 711 CIESFISRLIQSQSYPTAVALLERFSIRQSDQSFLLKMLQESQFTAAEKWAVFMGKPMIC 890
+E +I +L+ S+SY TAVAL+++FSI+ + Q FLLKMLQ QF AAEK+A G M+C
Sbjct: 180 FVEGYIHQLMDSRSYMTAVALIQQFSIQTAGQPFLLKMLQTRQFKAAEKYATHKGMDMLC 239
Query: 891 AAIQKYIEMKMFRKAYKLIKDNNLQQEFSEAYHMCKESSLKRLAEKGCWDVAEAKTHNNK 1070
+Q+Y+ M M + AY +IK NNL+QEF + YH CKESSLK+LAEKGCWD+AE KT++++
Sbjct: 240 LLVQEYVNMNMLKDAYDVIKKNNLRQEFPDIYHKCKESSLKKLAEKGCWDIAEVKTNSDR 299
Query: 1071 QLLEYLVYLAMEAGYSEKIDELCERHSLKGFLNSKELETNAPTTRYLSFHELVAEDIIWV 1250
QL+EYLVYLAMEAGY+EK+DELC+R+SL+GF+ +KE E + + RYL+ +ELV E IIWV
Sbjct: 300 QLIEYLVYLAMEAGYTEKVDELCDRYSLEGFVKAKEAEISPLSCRYLNINELVVEGIIWV 359
Query: 1251 DDVNSLLKATSCIEDCKVVGIDCEWKPNYEKGSKPNKVSIMQIASEKTAFIIDMLKLSEV 1430
D+VN L A+ IE CKV+GIDCEWKPNYEKGSKPNKVSI+Q+ASEK AFI D++KL+
Sbjct: 360 DEVNGLHNASCYIEGCKVLGIDCEWKPNYEKGSKPNKVSILQVASEKRAFIFDLIKLATD 419
Query: 1431 DPTILDHCLKRILHSPSILKLGYNLQCDLKQLSHSY-KLECFKHYEMLLDLQNVFKEPNG 1607
P +LD+CL ILHS ILKLGYN QCD+ QL+ SY +L+CFKH+EMLLD+QN+FKEP G
Sbjct: 420 VPDVLDNCLISILHSSRILKLGYNFQCDVNQLTQSYGELKCFKHFEMLLDIQNMFKEPRG 479
Query: 1608 GLSGLAEKVLGAGLNKTRRNSNWEHRPLSQNQMEYAALDAAVLVHIFRHVRSQTNSCNVN 1787
GLSGLA+KVLGAGLNKTRRNSNWE RPLSQ+Q+EYAALDAAVLVHIF T
Sbjct: 480 GLSGLAKKVLGAGLNKTRRNSNWEQRPLSQHQLEYAALDAAVLVHIFSKGSPAT---TFP 536
Query: 1788 DGETKLEWKSHIVSHMDD 1841
+G+ K EWKS+IV+HMD+
Sbjct: 537 EGQAKNEWKSYIVAHMDN 554
>ref|XP_004167136.1| PREDICTED: uncharacterized LOC101205010 [Cucumis sativus]
Length = 580
Score = 641 bits (1653), Expect = 0.0
Identities = 322/562 (57%), Positives = 417/562 (74%), Gaps = 8/562 (1%)
Frame = +3
Query: 183 MGVEESEGNDENNKNNSHEAWCINLHTFSDMSHVSPAVFIYLLKESYVRGTQKATAKFRA 362
MG +++ + + +H AW I +H+ SD+S++SP VF+YLLKE Y+RGT KAT KFR
Sbjct: 1 MGFDQTVAEPLDPIDQTHLAWKITVHSLSDLSYISPVVFLYLLKECYIRGTLKATKKFRF 60
Query: 363 LQQQVRQLLHNSPCPGPATFVVQCLFVLPILGELYTEGFGHLVISSFRR---VQTVPADL 533
LQQQV +LHN P PGPATFV++CL+VLPI G LY+EGF HL+ S+ +R V PADL
Sbjct: 61 LQQQVHLVLHNGPQPGPATFVIRCLYVLPIFG-LYSEGFSHLITSALQRFLKVVITPADL 119
Query: 534 SEXXXXXXXXVLEIIGGNVIYGEIVLIKLLEAFDIRMGNIQKALC-GKEVNDDSVDSANT 710
E ++I+GG + + + +++K+++ FD+++ +++K + K N S DSA
Sbjct: 120 DEAKDLAAQLFIDIVGGFIAHDDRIVVKIIQIFDVQLSDVEKVMFESKARNRCSSDSAKD 179
Query: 711 CIESFISRLIQSQSYPTAVALLERFSIRQSDQSFLLKMLQESQFTAAEKWAVFMGKPMIC 890
+E ++S L+++Q Y TAV +LE FSI QS QS L MLQ ++F AAEKWA FMGK M+
Sbjct: 180 FVEQYVSELLETQGYATAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGKQMLH 239
Query: 891 AAIQKYIEMKMFRKAYKLIKDNNLQQEFSEAYHMCKESSLKRLAEKGCWDVAEAKTHNNK 1070
+Q+ I + AY +IK N+LQ+EF + Y CKESSLK LAEKGCWDVAEAK +NN+
Sbjct: 240 LLVQELINRNKLKSAYGVIKKNDLQKEFPDVYQKCKESSLKNLAEKGCWDVAEAKANNNR 299
Query: 1071 QLLEYLVYLAMEAGYSEKIDELCERHSLKGFLNSKELETNAP---TTRYLSFHELVAEDI 1241
Q LEYLVYLA+EAGY EK+DELC R+SL GFLN KE E + YL ++L+ +I
Sbjct: 300 QFLEYLVYLALEAGYFEKVDELCTRYSLTGFLNIKEREGSYEQKLPNHYLDLNQLIDGNI 359
Query: 1242 IWVDDVNSLLKATSCIEDCKVVGIDCEWKPNYEKGSKPNKVSIMQIASEKTAFIIDMLKL 1421
+W+D+ ++L +AT IE+CKVVGIDCEWKPNY KG KPNKVSIMQIASEK AFI D++KL
Sbjct: 360 LWIDNADALHRATCHIEECKVVGIDCEWKPNYIKGKKPNKVSIMQIASEKMAFIFDLIKL 419
Query: 1422 SEVDPTILDHCLKRILHSPSILKLGYNLQCDLKQLSHSYK-LECFKHYEMLLDLQNVFKE 1598
+ P ILD+CL RIL S SILKLGYN CD+KQLSHSY+ L+CFKHYEMLLD+QN+F +
Sbjct: 420 YDDVPDILDNCLTRILQSSSILKLGYNFLCDVKQLSHSYESLKCFKHYEMLLDIQNIF-D 478
Query: 1599 PNGGLSGLAEKVLGAGLNKTRRNSNWEHRPLSQNQMEYAALDAAVLVHIFRHVRSQTNSC 1778
+GGLSGLA+KVLGAGLNKTRRNS+WE RPL+ NQ+EYAALDA VLVHIF+HVR Q+
Sbjct: 479 HSGGLSGLAQKVLGAGLNKTRRNSDWEQRPLTVNQLEYAALDAVVLVHIFQHVRDQSQPS 538
Query: 1779 NVNDGETKLEWKSHIVSHMDDN 1844
+GET+LE KS IVSHMD++
Sbjct: 539 TTTEGETRLERKSFIVSHMDNS 560
>ref|XP_004135767.1| PREDICTED: uncharacterized protein LOC101205010 [Cucumis sativus]
Length = 580
Score = 640 bits (1651), Expect = 0.0
Identities = 322/562 (57%), Positives = 417/562 (74%), Gaps = 8/562 (1%)
Frame = +3
Query: 183 MGVEESEGNDENNKNNSHEAWCINLHTFSDMSHVSPAVFIYLLKESYVRGTQKATAKFRA 362
MG +++ + + +H AW I +H+ SD+S++SP VF+YLLKE Y+RGT KAT KFR
Sbjct: 1 MGFDQTVAEPLDPIDQTHLAWKITVHSLSDLSYISPVVFLYLLKECYIRGTLKATKKFRF 60
Query: 363 LQQQVRQLLHNSPCPGPATFVVQCLFVLPILGELYTEGFGHLVISSFRR---VQTVPADL 533
LQQQV +LHN P PGPATFV++CL+VLPI G LY+EGF HL+ S+ +R V PADL
Sbjct: 61 LQQQVHLVLHNGPQPGPATFVIRCLYVLPIFG-LYSEGFSHLITSALQRFLKVVITPADL 119
Query: 534 SEXXXXXXXXVLEIIGGNVIYGEIVLIKLLEAFDIRMGNIQKALC-GKEVNDDSVDSANT 710
E ++I+GG + + + +++K+++ FD+++ +++K + K N S DSA
Sbjct: 120 DEAKDLAAQLFIDIVGGFIAHDDRIVVKIIQIFDVQLSDVEKVMFESKARNRCSSDSAKD 179
Query: 711 CIESFISRLIQSQSYPTAVALLERFSIRQSDQSFLLKMLQESQFTAAEKWAVFMGKPMIC 890
+E ++S L+++Q Y TAV +LE FSI QS QS L MLQ ++F AAEKWA FMGK M+
Sbjct: 180 FVEQYVSELLETQGYATAVDVLEHFSIHQSGQSLLYGMLQNNEFKAAEKWATFMGKQMLH 239
Query: 891 AAIQKYIEMKMFRKAYKLIKDNNLQQEFSEAYHMCKESSLKRLAEKGCWDVAEAKTHNNK 1070
+Q+ I + AY +IK N+LQ+EF + Y CKESSLK LAEKGCWDVAEAK +NN+
Sbjct: 240 LLVQELINRNKLKSAYGVIKKNDLQKEFPDVYQKCKESSLKNLAEKGCWDVAEAKANNNR 299
Query: 1071 QLLEYLVYLAMEAGYSEKIDELCERHSLKGFLNSKELETNAP---TTRYLSFHELVAEDI 1241
Q LEYLVYLA+EAGY EK+DELC R+SL GFLN KE E + YL ++L+ +I
Sbjct: 300 QFLEYLVYLALEAGYFEKVDELCTRYSLTGFLNIKEREGSYEQKLPNHYLDLNQLIDGNI 359
Query: 1242 IWVDDVNSLLKATSCIEDCKVVGIDCEWKPNYEKGSKPNKVSIMQIASEKTAFIIDMLKL 1421
+W+D+ ++L +AT IE+CKVVGIDCEWKPNY KG KPNKVSIMQIASEK AFI D++KL
Sbjct: 360 LWIDNADALHRATCHIEECKVVGIDCEWKPNYIKGKKPNKVSIMQIASEKMAFIFDLIKL 419
Query: 1422 SEVDPTILDHCLKRILHSPSILKLGYNLQCDLKQLSHSYK-LECFKHYEMLLDLQNVFKE 1598
+ P ILD+CL RIL S SILKLGYN CD+KQLSHSY+ L+CFKHYEMLLD+QN+F +
Sbjct: 420 YDDVPDILDNCLTRILQSSSILKLGYNFLCDVKQLSHSYESLKCFKHYEMLLDIQNIF-D 478
Query: 1599 PNGGLSGLAEKVLGAGLNKTRRNSNWEHRPLSQNQMEYAALDAAVLVHIFRHVRSQTNSC 1778
+GGLSGLA+KVLGAGLNKTRRNS+WE RPL+ NQ+EYAALDA VLVHIF+HVR Q+
Sbjct: 479 HSGGLSGLAQKVLGAGLNKTRRNSDWEQRPLTVNQLEYAALDAVVLVHIFQHVRDQSQPS 538
Query: 1779 NVNDGETKLEWKSHIVSHMDDN 1844
+GET+LE KS IVSHMD++
Sbjct: 539 TTTEGETRLERKSFIVSHMDNS 560