BLASTX nr result

ID: Coptis24_contig00009873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009873
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245...   152   5e-50
ref|XP_002285114.1| PREDICTED: uncharacterized protein LOC100254...   125   1e-43
ref|XP_004150590.1| PREDICTED: uncharacterized protein LOC101203...   126   3e-42
gb|ABK26133.1| unknown [Picea sitchensis]                             121   6e-42
gb|AAC32109.1| hypothetical protein [Picea mariana] gi|116781961...   119   7e-42

>ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245670 [Vitis vinifera]
           gi|297738963|emb|CBI28208.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  152 bits (383), Expect(2) = 5e-50
 Identities = 72/115 (62%), Positives = 84/115 (73%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   GCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXXXXXX 182
           GCLGCCTK TPIIAVDEPSKGL+IQGRTVKKPSISEDFWSTSTCE+D             
Sbjct: 6   GCLGCCTKPTPIIAVDEPSKGLRIQGRTVKKPSISEDFWSTSTCEIDNSTVQSQRSISSI 65

Query: 183 XXXXXXLEAHCGLGSTSSPTEFVNHGYILWNQTRQQWIGN-RPRNRTHHVREPRL 344
                 L  + G+GSTS+ +EF+NHG +LWNQTR QW+GN R  N++  +REPRL
Sbjct: 66  STSNQSLTHYSGIGSTSNNSEFINHGLLLWNQTRLQWVGNKRSENQSQQIREPRL 120



 Score = 72.8 bits (177), Expect(2) = 5e-50
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +1

Query: 421 WNVTYDSLLGTNKPFPQPITLSEMVDFLVDVWEQEGMYD 537
           WN TY+ LLGTN+ F QPI LSEM+DFLVDVWEQEGMYD
Sbjct: 122 WNATYEGLLGTNRRFSQPIPLSEMIDFLVDVWEQEGMYD 160


>ref|XP_002285114.1| PREDICTED: uncharacterized protein LOC100254371 isoform 1 [Vitis
           vinifera]
          Length = 173

 Score =  125 bits (313), Expect(2) = 1e-43
 Identities = 61/114 (53%), Positives = 69/114 (60%)
 Frame = +3

Query: 3   GCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXXXXXX 182
           GCLGCC+K T II V E  KGL IQGRT  +PS  EDFWSTST EMD             
Sbjct: 20  GCLGCCSKPTEIIGVYESPKGLTIQGRTAMRPSPVEDFWSTSTGEMDNSAVQSQGSISSI 79

Query: 183 XXXXXXLEAHCGLGSTSSPTEFVNHGYILWNQTRQQWIGNRPRNRTHHVREPRL 344
                  + H   GSTS+P EFVNHG +LWNQTRQQWIGN+       V+EPR+
Sbjct: 80  STSNQTFDPHSNAGSTSNPPEFVNHGLLLWNQTRQQWIGNQKSQNRKQVQEPRI 133



 Score = 78.6 bits (192), Expect(2) = 1e-43
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = +1

Query: 418 SWNVTYDSLLGTNKPFPQPITLSEMVDFLVDVWEQEGMYD 537
           SWN TY+SLLGTNKP PQPI L EMVDFLVDVWEQEG+YD
Sbjct: 134 SWNATYESLLGTNKPLPQPIPLPEMVDFLVDVWEQEGLYD 173


>ref|XP_004150590.1| PREDICTED: uncharacterized protein LOC101203426 [Cucumis sativus]
           gi|449523626|ref|XP_004168824.1| PREDICTED:
           uncharacterized LOC101203426 [Cucumis sativus]
          Length = 177

 Score =  126 bits (316), Expect(2) = 3e-42
 Identities = 61/111 (54%), Positives = 69/111 (62%)
 Frame = +3

Query: 3   GCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXXXXXX 182
           GC GCCTK TPIIAVDEPSKGL+IQGR VKKPSIS+ FWSTSTC++D             
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 183 XXXXXXLEAHCGLGSTSSPTEFVNHGYILWNQTRQQWIGNRPRNRTHHVRE 335
                 L      GS SS +EFVNHG +LWNQTR QWIG+     T    +
Sbjct: 81  STSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGSGTTKTTDETEQ 131



 Score = 72.8 bits (177), Expect(2) = 3e-42
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +1

Query: 418 SWNVTYDSLLGTNKPFPQPITLSEMVDFLVDVWEQEGMYD 537
           SW  TYDSLLGT +PFP PI LSEMV+FLV+VWEQEG+YD
Sbjct: 138 SWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 177


>gb|ABK26133.1| unknown [Picea sitchensis]
          Length = 172

 Score =  121 bits (304), Expect(2) = 6e-42
 Identities = 60/114 (52%), Positives = 73/114 (64%)
 Frame = +3

Query: 3   GCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXXXXXX 182
           GCLG C K TPIIAVDEPSK LK+QGR++K PS SEDFWS+ST EMD             
Sbjct: 20  GCLGGCAKPTPIIAVDEPSKRLKVQGRSLKGPSFSEDFWSSSTNEMDNSTVQSQRSVSSI 79

Query: 183 XXXXXXLEAHCGLGSTSSPTEFVNHGYILWNQTRQQWIGNRPRNRTHHVREPRL 344
                  ++     + ++ TEFVNH  ILWN+ RQQW+G+RPRN T  +REP L
Sbjct: 80  SASNQNSDSRAA-NTNANNTEFVNHALILWNEMRQQWVGDRPRNHTRQLREPVL 132



 Score = 76.3 bits (186), Expect(2) = 6e-42
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +1

Query: 418 SWNVTYDSLLGTNKPFPQPITLSEMVDFLVDVWEQEGMYD 537
           SWN TY+SLLGTN+PFPQ I LSEMV+FLVDVWEQEG+YD
Sbjct: 133 SWNTTYESLLGTNRPFPQLIPLSEMVEFLVDVWEQEGLYD 172


>gb|AAC32109.1| hypothetical protein [Picea mariana] gi|116781961|gb|ABK22316.1|
           unknown [Picea sitchensis]
          Length = 158

 Score =  119 bits (299), Expect(2) = 7e-42
 Identities = 59/114 (51%), Positives = 72/114 (63%)
 Frame = +3

Query: 3   GCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXXXXXX 182
           GCLG C K TPIIAVDEPSK LK+QGR++K PS SEDFWS+ST EMD             
Sbjct: 6   GCLGGCAKPTPIIAVDEPSKRLKVQGRSLKGPSFSEDFWSSSTNEMDNSTVQSQRSVSSI 65

Query: 183 XXXXXXLEAHCGLGSTSSPTEFVNHGYILWNQTRQQWIGNRPRNRTHHVREPRL 344
                  ++     + ++ TEFVNH  ILWN+ RQQW+G+RPRN    +REP L
Sbjct: 66  SASNQNSDSRAA-NTNANNTEFVNHALILWNEMRQQWVGDRPRNHARQLREPVL 118



 Score = 77.8 bits (190), Expect(2) = 7e-42
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +1

Query: 418 SWNVTYDSLLGTNKPFPQPITLSEMVDFLVDVWEQEGMYD 537
           SWN TY+SLLGTN+PFPQ I LSEMVDFLVDVWEQEG+YD
Sbjct: 119 SWNTTYESLLGTNRPFPQLIPLSEMVDFLVDVWEQEGLYD 158


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