BLASTX nr result

ID: Coptis24_contig00009713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009713
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
 Frame = -1

Query: 305 LPFDPSPNSLLDCCNGMLLFFDRSSMQFYVYNPSTEQYIAIPNSPRRGGPPDGALFFD-- 132
           LPF+P+    LDCCNG+LLF +  ++Q+YV NP+T+  +AIP           AL FD  
Sbjct: 114 LPFEPARGDFLDCCNGLLLFVEGCTLQYYVCNPATKHCVAIPRDFMLENIIFAALAFDPS 173

Query: 131 --PHFKIV----HVSGLSPRLNIYSQATRKWS 54
             PH+++V      S    RL ++S  T  W+
Sbjct: 174 TSPHYRVVCFDYSESRPPVRLQVFSSETGNWT 205


>ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|222850806|gb|EEE88353.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
 Frame = -1

Query: 305 LPFDPSPNSLLDCCNGMLLFFDRSSMQFYVYNPSTEQYIAIPNSPRRGGPPDGALFFD-- 132
           LPFD +    LDCCNG+LLF +    ++YV NP T+Q +AIP           +L FD  
Sbjct: 109 LPFDLARGDFLDCCNGLLLFVEGPIPRYYVCNPVTKQCVAIPRDFTLENICTASLAFDPF 168

Query: 131 --PHFKIV--HVSGLSP--RLNIYSQATRKWSV 51
             PH+++V    S L P  +L ++S  T  W++
Sbjct: 169 KSPHYRVVCFDYSKLKPPQKLRVFSSETGSWTI 201


>ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|222838455|gb|EEE76820.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
 Frame = -1

Query: 305 LPFDPSPNSLLDCCNGMLLFFDRSSMQFYVYNPSTEQYIAIPNSPRRGGPPDGALFFD-- 132
           LPFD +    LDCCNG+LLF +    ++YV NP T+Q +AIP           +L FD  
Sbjct: 114 LPFDLARGDFLDCCNGLLLFVEGPIPRYYVCNPVTKQCVAIPRDFTLENICTASLAFDPF 173

Query: 131 --PHFKIV--HVSGLSP--RLNIYSQATRKWSV 51
             PH+++V    S L P  +L ++S  T  W++
Sbjct: 174 KSPHYRVVCFDYSKLKPPQKLRVFSSETGSWTI 206


>ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|222838910|gb|EEE77261.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
 Frame = -1

Query: 305 LPFDPSPNSLLDCCNGMLLFFDRSSMQ-----FYVYNPSTEQYIAIPNSPRRGGPPDGAL 141
           LPF  S +   DCCNG+LLF  R   +     ++V N +T Q +AIPN   R  P   A+
Sbjct: 97  LPFMLSSDHYFDCCNGLLLFVRREQREDLPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAI 156

Query: 140 FFD----PHFKIVHVSGLSP------RLNIYSQATRKW 57
            +D    PH+K+V    L        +L+I+S  T KW
Sbjct: 157 AYDPAKSPHYKVVRFIYLEEKTSCPVKLDIFSSDTGKW 194


>ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|222835715|gb|EEE74150.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
 Frame = -1

Query: 305 LPFDPSPNSLLDCCNGMLLFFDRSSMQ-----FYVYNPSTEQYIAIPNSPRRGGPPDGAL 141
           LPF  S +   DCCNG+LLF  R   +     ++V N +T Q +AIPN   R  P   A+
Sbjct: 97  LPFMLSSDHYFDCCNGLLLFVRREQREALPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAI 156

Query: 140 FFD----PHFKIVHVSGLSP------RLNIYSQATRKW 57
            +D    PH+K+V    L        +L+I+S  T KW
Sbjct: 157 AYDPAKSPHYKVVRFIYLEEKTSCPVKLDIFSSDTGKW 194


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