BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009636
         (1381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30774.3| unnamed protein product [Vitis vinifera]              353   4e-95
ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|2...   341   2e-91
ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containi...   330   7e-88
ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containi...   328   2e-87
gb|ACU23441.1| unknown [Glycine max]                                  328   2e-87

>emb|CBI30774.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  353 bits (907), Expect = 4e-95
 Identities = 170/204 (83%), Positives = 184/204 (90%)
 Frame = -3

Query: 1055 HHLWMKKDSVGSGQKALNLVRIVSELPNEKEAVYAALDKWTAWEAEFPLVAAAKALRILQ 876
            HHLW K+DS+GSGQKALNLVRIVSELPNEKEAVY ALDKWTAWE EFPL+AAAKALRIL+
Sbjct: 72   HHLWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKALRILR 131

Query: 875  KRNQWLRVIQVGKWLLSKGQGLTMGTYDTLLLAFDVDQRIDEAESLWNMIVHMHTRSVSK 696
            KRNQW RVIQV KW+LSKGQG TMGTYDTLLLAFD+D R+DEAESLWNMI+H HTRS+SK
Sbjct: 132  KRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDWRVDEAESLWNMILHTHTRSISK 191

Query: 695  RLFSRMITLYDHHSMPAKIIEVFADMEELGVKPDEDTTRRVAHAFLKLGDEGKQKLVLKK 516
            +LFSRMI+LYDHH M  K+IEVFADMEELGVKPDEDT RRVA AF  LG E KQKLVLKK
Sbjct: 192  QLFSRMISLYDHHDMRDKVIEVFADMEELGVKPDEDTVRRVACAFQTLGQEDKQKLVLKK 251

Query: 515  YLNKWKYIHFNGERVKVRREAWVE 444
            Y  KWKYIHFNGERV+VRR+AW E
Sbjct: 252  YQCKWKYIHFNGERVRVRRDAWDE 275


>ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|222859812|gb|EEE97359.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  341 bits (875), Expect = 2e-91
 Identities = 161/204 (78%), Positives = 183/204 (89%)
 Frame = -3

Query: 1055 HHLWMKKDSVGSGQKALNLVRIVSELPNEKEAVYAALDKWTAWEAEFPLVAAAKALRILQ 876
            HHLW K+DS GSGQKALNLVRIVSELPNEKEAVY ALDKWTAWE EFPL+AAAKAL+ILQ
Sbjct: 68   HHLWQKRDSAGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKALKILQ 127

Query: 875  KRNQWLRVIQVGKWLLSKGQGLTMGTYDTLLLAFDVDQRIDEAESLWNMIVHMHTRSVSK 696
            +R QW RVIQV KW+LSKGQG T+GTYDTLLLAFD D R+DEA+SLWNMI+H+HTRS+SK
Sbjct: 128  QRRQWTRVIQVAKWMLSKGQGATLGTYDTLLLAFDKDDRVDEAKSLWNMIIHVHTRSMSK 187

Query: 695  RLFSRMITLYDHHSMPAKIIEVFADMEELGVKPDEDTTRRVAHAFLKLGDEGKQKLVLKK 516
            RLFSRMI+LYDHH+M  +IIEVFADMEELGV+PDEDT  RVA AF KLG E K++LVL++
Sbjct: 188  RLFSRMISLYDHHNMQDEIIEVFADMEELGVRPDEDTVWRVARAFKKLGQEEKRELVLER 247

Query: 515  YLNKWKYIHFNGERVKVRREAWVE 444
            YL KWKYIHFNGERV+V+R+ W E
Sbjct: 248  YLCKWKYIHFNGERVRVKRDGWNE 271


>ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like [Cucumis sativus]
          Length = 270

 Score =  330 bits (845), Expect = 7e-88
 Identities = 154/204 (75%), Positives = 177/204 (86%)
 Frame = -3

Query: 1055 HHLWMKKDSVGSGQKALNLVRIVSELPNEKEAVYAALDKWTAWEAEFPLVAAAKALRILQ 876
            HHLW K+DS GSGQKALNLVRIVS+ PNEKEAVY  L+KW AWE EFPL+AAAKALRIL+
Sbjct: 64   HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILR 123

Query: 875  KRNQWLRVIQVGKWLLSKGQGLTMGTYDTLLLAFDVDQRIDEAESLWNMIVHMHTRSVSK 696
            KR+QW RVIQV KW+LSKGQG TMGTYDTLLLAFD+D+R+DEAESLWNMI+H HTRS+SK
Sbjct: 124  KRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISK 183

Query: 695  RLFSRMITLYDHHSMPAKIIEVFADMEELGVKPDEDTTRRVAHAFLKLGDEGKQKLVLKK 516
            R+FSRMI+LY+HH +  KIIE+FADMEELGVKPDEDT RRV  AF KLG E  +K+V K+
Sbjct: 184  RVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCRAFQKLGQEDNRKMVYKR 243

Query: 515  YLNKWKYIHFNGERVKVRREAWVE 444
            Y  +WKYIHF GERV+VRR+ W E
Sbjct: 244  YSCQWKYIHFKGERVRVRRDGWDE 267


>ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like [Glycine max]
          Length = 288

 Score =  328 bits (841), Expect = 2e-87
 Identities = 155/202 (76%), Positives = 177/202 (87%)
 Frame = -3

Query: 1055 HHLWMKKDSVGSGQKALNLVRIVSELPNEKEAVYAALDKWTAWEAEFPLVAAAKALRILQ 876
            HHLW  +DS  SGQKAL LVR V +LPNEKEAVY ALDKWTAWE EFP++A +KAL+IL+
Sbjct: 80   HHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILR 139

Query: 875  KRNQWLRVIQVGKWLLSKGQGLTMGTYDTLLLAFDVDQRIDEAESLWNMIVHMHTRSVSK 696
            KR  W+RVIQV KW+LSKGQG TMGTYDTLLLAFD+D+R+DEAESLWNMI+H H RSVSK
Sbjct: 140  KRGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHMRSVSK 199

Query: 695  RLFSRMITLYDHHSMPAKIIEVFADMEELGVKPDEDTTRRVAHAFLKLGDEGKQKLVLKK 516
            RLFSRMI+LYDHH+MP KII+VFADMEEL +KPDEDT RRVA AF +LGDE K+KLV+K+
Sbjct: 200  RLFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQ 259

Query: 515  YLNKWKYIHFNGERVKVRREAW 450
            Y  KWKYIHFNGERV+VR EAW
Sbjct: 260  YGLKWKYIHFNGERVRVRTEAW 281


>gb|ACU23441.1| unknown [Glycine max]
          Length = 288

 Score =  328 bits (841), Expect = 2e-87
 Identities = 155/202 (76%), Positives = 177/202 (87%)
 Frame = -3

Query: 1055 HHLWMKKDSVGSGQKALNLVRIVSELPNEKEAVYAALDKWTAWEAEFPLVAAAKALRILQ 876
            HHLW  +DS  SGQKAL LVR V +LPNEKEAVY ALDKWTAWE EFP++A +KAL+IL+
Sbjct: 80   HHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILR 139

Query: 875  KRNQWLRVIQVGKWLLSKGQGLTMGTYDTLLLAFDVDQRIDEAESLWNMIVHMHTRSVSK 696
            KR  W+RVIQV KW+LSKGQG TMGTYDTLLLAFD+D+R+DEAESLWNMI+H H RSVSK
Sbjct: 140  KRGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHLRSVSK 199

Query: 695  RLFSRMITLYDHHSMPAKIIEVFADMEELGVKPDEDTTRRVAHAFLKLGDEGKQKLVLKK 516
            RLFSRMI+LYDHH+MP KII+VFADMEEL +KPDEDT RRVA AF +LGDE K+KLV+K+
Sbjct: 200  RLFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQ 259

Query: 515  YLNKWKYIHFNGERVKVRREAW 450
            Y  KWKYIHFNGERV+VR EAW
Sbjct: 260  YGLKWKYIHFNGERVRVRTEAW 281