BLASTX nr result

ID: Coptis24_contig00009490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009490
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282520.1| PREDICTED: uncharacterized protein LOC100261...   315   1e-83
ref|XP_002309428.1| hypothetical protein POPTRDRAFT_416266 [Popu...   303   3e-80
ref|XP_004149203.1| PREDICTED: uncharacterized protein LOC101204...   294   3e-77
ref|XP_002528757.1| conserved hypothetical protein [Ricinus comm...   287   2e-75
ref|XP_002873122.1| hypothetical protein ARALYDRAFT_487166 [Arab...   280   5e-73

>ref|XP_002282520.1| PREDICTED: uncharacterized protein LOC100261348 [Vitis vinifera]
           gi|297740119|emb|CBI30301.3| unnamed protein product
           [Vitis vinifera]
          Length = 333

 Score =  315 bits (807), Expect = 1e-83
 Identities = 160/220 (72%), Positives = 166/220 (75%)
 Frame = -2

Query: 710 FAIRPDKXXXXXXXXXXXLFRLGTGVFVSGYSASFVSGSEIPSDEYAFEIAGFKVKETSK 531
           F+IRPDK           + RLGTGVFVSGYSASFVS SEIP DEY  EIAGFKVKETSK
Sbjct: 68  FSIRPDKVFDILGASLALILRLGTGVFVSGYSASFVSESEIPPDEYILEIAGFKVKETSK 127

Query: 530 LGPRPEKPIAIYEFEXXXXXXXXXXXXXXXXXXXXXCPFCRKVREIVAVLDLDVLYYPCP 351
           +GPRPEKPI IYEFE                     CPFCRKVREIVAVLDLDVL+YPCP
Sbjct: 128 VGPRPEKPIEIYEFES--------------------CPFCRKVREIVAVLDLDVLFYPCP 167

Query: 350 RNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDSIINYLVGKYGDGTVPXXXXXXXXX 171
           RNGPNFRPKV QMGGKQQFPYMVDPNTGVAMYESD II YLVGKYGDG VP         
Sbjct: 168 RNGPNFRPKVAQMGGKQQFPYMVDPNTGVAMYESDDIIKYLVGKYGDGNVPFMLSLGLLT 227

Query: 170 XXTEGFAMIGRMGKGSSYIPSKLPPEPVELWAYEASPFCK 51
             TEGFAMIGRMGKGSSY PSKLPP+P+ELWAYEASPFCK
Sbjct: 228 TLTEGFAMIGRMGKGSSYTPSKLPPKPLELWAYEASPFCK 267



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 29/68 (42%), Positives = 38/68 (55%)
 Frame = -2

Query: 419 PFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDSI 240
           PFC+ VRE++  L+L  +   C R  P  R  + Q     Q PY+ DPNTGV M+ES  I
Sbjct: 264 PFCKVVREVIVELELPHILRSCARGSPK-RQLLYQKARHFQAPYLEDPNTGVKMFESAEI 322

Query: 239 INYLVGKY 216
           + YL   Y
Sbjct: 323 VEYLKATY 330


>ref|XP_002309428.1| hypothetical protein POPTRDRAFT_416266 [Populus trichocarpa]
           gi|222855404|gb|EEE92951.1| hypothetical protein
           POPTRDRAFT_416266 [Populus trichocarpa]
          Length = 287

 Score =  303 bits (777), Expect = 3e-80
 Identities = 150/220 (68%), Positives = 163/220 (74%)
 Frame = -2

Query: 710 FAIRPDKXXXXXXXXXXXLFRLGTGVFVSGYSASFVSGSEIPSDEYAFEIAGFKVKETSK 531
           FA+RPDK           +FRLGTGVFV+GYS SFVS   IP D+Y+ E+AG+KVKETSK
Sbjct: 24  FAVRPDKTWDIIGASLALIFRLGTGVFVNGYSVSFVSKDAIPPDQYSLEVAGYKVKETSK 83

Query: 530 LGPRPEKPIAIYEFEXXXXXXXXXXXXXXXXXXXXXCPFCRKVREIVAVLDLDVLYYPCP 351
           LGPRPEKPI IYEFE                     CPFCRKVREIVAVLDLDVL+YPCP
Sbjct: 84  LGPRPEKPIEIYEFEG--------------------CPFCRKVREIVAVLDLDVLFYPCP 123

Query: 350 RNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDSIINYLVGKYGDGTVPXXXXXXXXX 171
           +NGPNFRPKV QMGGKQQFPYMVDPNTG AMYESD II YLV KYGDG++P         
Sbjct: 124 KNGPNFRPKVAQMGGKQQFPYMVDPNTGTAMYESDDIIKYLVQKYGDGSIPFTLSLGLLT 183

Query: 170 XXTEGFAMIGRMGKGSSYIPSKLPPEPVELWAYEASPFCK 51
             TEGFAMIGRMGKGSSY PSKLPP+P+ELWAYE SPFCK
Sbjct: 184 TLTEGFAMIGRMGKGSSYTPSKLPPKPLELWAYEGSPFCK 223



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/68 (42%), Positives = 40/68 (58%)
 Frame = -2

Query: 419 PFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDSI 240
           PFC+ VRE++  L+L  ++  C R  P  R  + +  G  Q PY+ DPNTGV M+ES  I
Sbjct: 220 PFCKIVREVLVELELPHIFRSCARGSPK-RQILFEKAGHFQAPYIEDPNTGVQMFESAEI 278

Query: 239 INYLVGKY 216
           + YL   Y
Sbjct: 279 VEYLKVTY 286


>ref|XP_004149203.1| PREDICTED: uncharacterized protein LOC101204318 [Cucumis sativus]
           gi|449500909|ref|XP_004161227.1| PREDICTED:
           uncharacterized LOC101204318 [Cucumis sativus]
          Length = 338

 Score =  294 bits (752), Expect = 3e-77
 Identities = 144/220 (65%), Positives = 160/220 (72%)
 Frame = -2

Query: 710 FAIRPDKXXXXXXXXXXXLFRLGTGVFVSGYSASFVSGSEIPSDEYAFEIAGFKVKETSK 531
           F +RPDK           +FRLGTG+FV+GYSAS V  ++ P D+YA EIAGFKVKETSK
Sbjct: 74  FGVRPDKFLDVLGASLSLVFRLGTGIFVNGYSASLVPKNDFPPDKYALEIAGFKVKETSK 133

Query: 530 LGPRPEKPIAIYEFEXXXXXXXXXXXXXXXXXXXXXCPFCRKVREIVAVLDLDVLYYPCP 351
           LGPRPEKPI IYEFE                     CPFCRKVREIVAVLDLD+L+YPCP
Sbjct: 134 LGPRPEKPIEIYEFES--------------------CPFCRKVREIVAVLDLDILFYPCP 173

Query: 350 RNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDSIINYLVGKYGDGTVPXXXXXXXXX 171
           RNGPNFRPKV+QMGGKQQFPYMVDPNTGV+MYESD II YLV  YGDG VP         
Sbjct: 174 RNGPNFRPKVLQMGGKQQFPYMVDPNTGVSMYESDDIIKYLVQNYGDGNVPLFLSLGLLT 233

Query: 170 XXTEGFAMIGRMGKGSSYIPSKLPPEPVELWAYEASPFCK 51
             +EGFAMIGR+G+GS Y PSKLPP P+E+WAYE SPFCK
Sbjct: 234 TLSEGFAMIGRLGRGSIYKPSKLPPAPLEIWAYEGSPFCK 273



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = -2

Query: 419 PFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDSI 240
           PFC+ VRE++  L+L  L   C R  P  R ++ +  G  Q PY+ DPNTGV M+ES  I
Sbjct: 270 PFCKLVREVLVELELPHLVRCCARGSPK-RQQLYEKEGHFQVPYLDDPNTGVRMFESAEI 328

Query: 239 INYLVGKY 216
           + YL   Y
Sbjct: 329 VEYLQATY 336


>ref|XP_002528757.1| conserved hypothetical protein [Ricinus communis]
           gi|223531851|gb|EEF33669.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 344

 Score =  287 bits (735), Expect = 2e-75
 Identities = 142/220 (64%), Positives = 158/220 (71%)
 Frame = -2

Query: 710 FAIRPDKXXXXXXXXXXXLFRLGTGVFVSGYSASFVSGSEIPSDEYAFEIAGFKVKETSK 531
           F ++P K           LFRLGTGVFVSGYSASFVS  EIP D+YA   AG+KVKETSK
Sbjct: 74  FTVKPGKTLDILGASLALLFRLGTGVFVSGYSASFVSKDEIPPDQYALGAAGYKVKETSK 133

Query: 530 LGPRPEKPIAIYEFEXXXXXXXXXXXXXXXXXXXXXCPFCRKVREIVAVLDLDVLYYPCP 351
           LGPRPEKPI IYEFE                     CPFCRKVREIVAVLD+DVL+YPCP
Sbjct: 134 LGPRPEKPIEIYEFES--------------------CPFCRKVREIVAVLDIDVLFYPCP 173

Query: 350 RNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDSIINYLVGKYGDGTVPXXXXXXXXX 171
           ++GP FRPK +Q+GGK+QFPYMVDPNTG AMYESD II YLVGKYGDG VP         
Sbjct: 174 KDGPTFRPKAIQLGGKRQFPYMVDPNTGTAMYESDDIIKYLVGKYGDGNVPLMLSLGLFT 233

Query: 170 XXTEGFAMIGRMGKGSSYIPSKLPPEPVELWAYEASPFCK 51
             T GFAMIGR GKGSSY PS+LPP+P+E+W+YE SPFCK
Sbjct: 234 TLTAGFAMIGRAGKGSSYTPSRLPPKPLEIWSYEGSPFCK 273


>ref|XP_002873122.1| hypothetical protein ARALYDRAFT_487166 [Arabidopsis lyrata subsp.
           lyrata] gi|297318959|gb|EFH49381.1| hypothetical protein
           ARALYDRAFT_487166 [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score =  280 bits (715), Expect = 5e-73
 Identities = 139/220 (63%), Positives = 153/220 (69%)
 Frame = -2

Query: 710 FAIRPDKXXXXXXXXXXXLFRLGTGVFVSGYSASFVSGSEIPSDEYAFEIAGFKVKETSK 531
           FA++  K            FR GTGVFVSGYSASFVS  EIP+D+YA  + G  VKET+K
Sbjct: 72  FAVKSGKLFDVFGAAIGLFFRFGTGVFVSGYSASFVSKEEIPADQYALRLGGITVKETAK 131

Query: 530 LGPRPEKPIAIYEFEXXXXXXXXXXXXXXXXXXXXXCPFCRKVREIVAVLDLDVLYYPCP 351
           +GPRPEKPI IYEFE                     CPFCRKVRE+VAVLDLD+LYYPCP
Sbjct: 132 VGPRPEKPIEIYEFEG--------------------CPFCRKVREMVAVLDLDILYYPCP 171

Query: 350 RNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDSIINYLVGKYGDGTVPXXXXXXXXX 171
           R  PNFRPKV QMGGKQQFPYMVDPNTGV+MYESD II YL  KYGDGTVP         
Sbjct: 172 RGSPNFRPKVKQMGGKQQFPYMVDPNTGVSMYESDGIIKYLSEKYGDGTVPLSLSLGALT 231

Query: 170 XXTEGFAMIGRMGKGSSYIPSKLPPEPVELWAYEASPFCK 51
             T GFAMIGRMGKG+ Y P+KLPP+P+E WAYE SPFCK
Sbjct: 232 AITAGFAMIGRMGKGNLYTPAKLPPKPLEFWAYEGSPFCK 271



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 30/68 (44%), Positives = 41/68 (60%)
 Frame = -2

Query: 419 PFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDSI 240
           PFC+ VRE++  L+L  +   C R  P  R  +++  G  Q PY+ DPNTGVAM+ES  I
Sbjct: 268 PFCKLVREVLVELELPHIQRSCARGSPK-RQVLLEKAGHFQVPYLEDPNTGVAMFESAEI 326

Query: 239 INYLVGKY 216
           + YL   Y
Sbjct: 327 VEYLKQTY 334


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