BLASTX nr result

ID: Coptis24_contig00009481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009481
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528315.1| PREDICTED: uncharacterized protein LOC100775...   362   8e-98
ref|XP_003531718.1| PREDICTED: uncharacterized protein LOC100790...   356   8e-96
ref|XP_002266079.2| PREDICTED: uncharacterized protein LOC100242...   354   2e-95
ref|XP_002517643.1| conserved hypothetical protein [Ricinus comm...   342   1e-91
ref|XP_002299689.1| predicted protein [Populus trichocarpa] gi|2...   341   2e-91

>ref|XP_003528315.1| PREDICTED: uncharacterized protein LOC100775686 [Glycine max]
          Length = 279

 Score =  362 bits (930), Expect = 8e-98
 Identities = 179/267 (67%), Positives = 207/267 (77%)
 Frame = -2

Query: 1013 MNGDGPPSLSSNLRNRPISLAAVDLVDNQPKPPTITTTMSKKPSLLFMSSLVADASFLSW 834
            MNG    S++   R++  S   V + +     P+              S+L  DASF+ W
Sbjct: 1    MNGGAEASVNHRRRHQAASANGVKIANGAMAKPS--------------STLCYDASFMKW 46

Query: 833  SLKDALGLAKHHPIPFLFGLCLFFFMAVEYTLFMIPPSSPPFDLGFILTQPIHRILAAEP 654
            ++ DA+ +A HH +P LF L L FFMAVEYTL M+PPSSPPFDLGFI T+ +H +L + P
Sbjct: 47   TVADAVHVATHHWMPCLFALGLLFFMAVEYTLLMVPPSSPPFDLGFIATRSLHALLESSP 106

Query: 653  ALNTVLAGLNTVFVGMQTTYILWTWLVEGRPRATIAALFMFTCRGILGYCTQLPLPQGFL 474
             LNT+ AGLNTVFVGMQT+YILWTWL+EGRPRATI+ALFMFTCRGILGY TQLPLPQGFL
Sbjct: 107  NLNTLFAGLNTVFVGMQTSYILWTWLIEGRPRATISALFMFTCRGILGYSTQLPLPQGFL 166

Query: 473  GSGADFPVGNVPFFLFFSGHVAGSVIASMDMRRMQRWETAWLFDTLNVLQMVRLLGTRGH 294
            GSG DFPVGNV FFLFFSGHVAGSVIAS+DMRRMQRWE AW FD LNVLQ VRLLGTRGH
Sbjct: 167  GSGVDFPVGNVSFFLFFSGHVAGSVIASLDMRRMQRWELAWTFDVLNVLQAVRLLGTRGH 226

Query: 293  YSIDLAVGVGAGLLFDSFAGKYEESKK 213
            Y+IDLAVGVGAG+LFDS AGKYE+SK+
Sbjct: 227  YTIDLAVGVGAGILFDSLAGKYEDSKR 253


>ref|XP_003531718.1| PREDICTED: uncharacterized protein LOC100790665 [Glycine max]
          Length = 267

 Score =  356 bits (913), Expect = 8e-96
 Identities = 168/215 (78%), Positives = 188/215 (87%)
 Frame = -2

Query: 851 ASFLSWSLKDALGLAKHHPIPFLFGLCLFFFMAVEYTLFMIPPSSPPFDLGFILTQPIHR 672
           ASF+ W++ DA+ +  HH +P LF L L FFMAVEYTL M+PPSSPPFDLGFI T+ +H 
Sbjct: 45  ASFMKWTVADAVHVVTHHWMPCLFALGLLFFMAVEYTLLMVPPSSPPFDLGFIATRSLHA 104

Query: 671 ILAAEPALNTVLAGLNTVFVGMQTTYILWTWLVEGRPRATIAALFMFTCRGILGYCTQLP 492
           +L + P LNT+ AGLNTVFVGMQT+YILWTWL+EGRPRATI+ALFMFTCRGILGY TQLP
Sbjct: 105 LLESSPNLNTLFAGLNTVFVGMQTSYILWTWLIEGRPRATISALFMFTCRGILGYSTQLP 164

Query: 491 LPQGFLGSGADFPVGNVPFFLFFSGHVAGSVIASMDMRRMQRWETAWLFDTLNVLQMVRL 312
           LPQGFLGSG DFPVGNV FFLFFSGHVAGSVIAS+DMRRMQRWE AW FD LNVLQ VRL
Sbjct: 165 LPQGFLGSGVDFPVGNVSFFLFFSGHVAGSVIASLDMRRMQRWELAWTFDVLNVLQAVRL 224

Query: 311 LGTRGHYSIDLAVGVGAGLLFDSFAGKYEESKKRG 207
           LGTRGHY+IDLAVGVGAG+LFDS AGKYE+SK+ G
Sbjct: 225 LGTRGHYTIDLAVGVGAGILFDSLAGKYEDSKRNG 259


>ref|XP_002266079.2| PREDICTED: uncharacterized protein LOC100242207 [Vitis vinifera]
          Length = 281

 Score =  354 bits (909), Expect = 2e-95
 Identities = 178/269 (66%), Positives = 208/269 (77%), Gaps = 1/269 (0%)
 Frame = -2

Query: 1013 MNGDGPPSLSSNLRNRPI-SLAAVDLVDNQPKPPTITTTMSKKPSLLFMSSLVADASFLS 837
            MNG  P   S  L+ R   S AA   +        I   M +K      +   + ASF++
Sbjct: 1    MNGHQPLRSSCTLKTRSNKSKAAAISLRASGDGGRIPAEMKQKKKTA--NGFWSKASFMN 58

Query: 836  WSLKDALGLAKHHPIPFLFGLCLFFFMAVEYTLFMIPPSSPPFDLGFILTQPIHRILAAE 657
            WS+ DA+GL + HP+P +F + L FFM VEYTL M+P SSPPFDLGF+ T+ +HRILA+ 
Sbjct: 59   WSMDDAVGLFRFHPMPCVFAVSLLFFMGVEYTLRMVPSSSPPFDLGFVATEWLHRILASS 118

Query: 656  PALNTVLAGLNTVFVGMQTTYILWTWLVEGRPRATIAALFMFTCRGILGYCTQLPLPQGF 477
            P LNT+LAGLNTVFVGMQTTYI+WTW+VEGRPRATI+ALFMFTCRGILGY TQLP+PQGF
Sbjct: 119  PDLNTLLAGLNTVFVGMQTTYIIWTWMVEGRPRATISALFMFTCRGILGYSTQLPVPQGF 178

Query: 476  LGSGADFPVGNVPFFLFFSGHVAGSVIASMDMRRMQRWETAWLFDTLNVLQMVRLLGTRG 297
            LGSG DFPVGNV FFLFFSGHVAGSVIAS+DMRRM+RW  AW FD LN+LQ VRLLGTRG
Sbjct: 179  LGSGVDFPVGNVSFFLFFSGHVAGSVIASLDMRRMKRWGMAWTFDVLNILQGVRLLGTRG 238

Query: 296  HYSIDLAVGVGAGLLFDSFAGKYEESKKR 210
            HY+IDLAVG+GAG+LFDS AGKYEE K+R
Sbjct: 239  HYTIDLAVGIGAGVLFDSLAGKYEEGKRR 267


>ref|XP_002517643.1| conserved hypothetical protein [Ricinus communis]
           gi|223543275|gb|EEF44807.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  342 bits (876), Expect = 1e-91
 Identities = 162/215 (75%), Positives = 186/215 (86%)
 Frame = -2

Query: 854 DASFLSWSLKDALGLAKHHPIPFLFGLCLFFFMAVEYTLFMIPPSSPPFDLGFILTQPIH 675
           D SF+ W+  D + + K H +P +FGL L FFMAVEYTL M+P SSPPFDLGF++T+ +H
Sbjct: 59  DPSFMKWTTHDVVNVVKFHWLPCVFGLGLLFFMAVEYTLRMVPASSPPFDLGFLVTRHLH 118

Query: 674 RILAAEPALNTVLAGLNTVFVGMQTTYILWTWLVEGRPRATIAALFMFTCRGILGYCTQL 495
            +L++ PALNT+LA LNTVFV MQT YILWTWL+EGRPRATI+ALFMFTCRGILGY TQL
Sbjct: 119 LLLSSWPALNTLLAFLNTVFVLMQTAYILWTWLIEGRPRATISALFMFTCRGILGYSTQL 178

Query: 494 PLPQGFLGSGADFPVGNVPFFLFFSGHVAGSVIASMDMRRMQRWETAWLFDTLNVLQMVR 315
           PLP+GFLGSG DFPVGNV FFLFFSGHVAGSVIAS+DMRRMQRWE AW +D LNVLQ VR
Sbjct: 179 PLPEGFLGSGVDFPVGNVSFFLFFSGHVAGSVIASLDMRRMQRWELAWTYDVLNVLQAVR 238

Query: 314 LLGTRGHYSIDLAVGVGAGLLFDSFAGKYEESKKR 210
           LLGTRGHY+IDLA GVGAG+LFDS AGKYEESK++
Sbjct: 239 LLGTRGHYTIDLATGVGAGILFDSLAGKYEESKRK 273


>ref|XP_002299689.1| predicted protein [Populus trichocarpa] gi|222846947|gb|EEE84494.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  341 bits (875), Expect = 2e-91
 Identities = 163/215 (75%), Positives = 183/215 (85%)
 Frame = -2

Query: 854 DASFLSWSLKDALGLAKHHPIPFLFGLCLFFFMAVEYTLFMIPPSSPPFDLGFILTQPIH 675
           D  FL W++ D + +AKHH +P  FG  L FFMAVEYTL M+P SSPPFDLGF+ T  +H
Sbjct: 25  DPFFLKWTVHDMVNVAKHHWLPCFFGFGLLFFMAVEYTLPMVPASSPPFDLGFVATHLLH 84

Query: 674 RILAAEPALNTVLAGLNTVFVGMQTTYILWTWLVEGRPRATIAALFMFTCRGILGYCTQL 495
            +L + P LNT+LA LNTVFVGMQTTYILWTWLVEGRPRATI+ALFMFTCRGILGY TQL
Sbjct: 85  GLLYSWPELNTLLAALNTVFVGMQTTYILWTWLVEGRPRATISALFMFTCRGILGYSTQL 144

Query: 494 PLPQGFLGSGADFPVGNVPFFLFFSGHVAGSVIASMDMRRMQRWETAWLFDTLNVLQMVR 315
           PLP+ FLGSGADFPVGNV FFLFFSGHVAGSVIAS+DMRRMQRWE AW FD LNVLQ++R
Sbjct: 145 PLPEEFLGSGADFPVGNVSFFLFFSGHVAGSVIASLDMRRMQRWELAWTFDVLNVLQVIR 204

Query: 314 LLGTRGHYSIDLAVGVGAGLLFDSFAGKYEESKKR 210
           LLGTRGHY+IDL VGVGAG+LFDS AGKY+E  +R
Sbjct: 205 LLGTRGHYTIDLVVGVGAGILFDSLAGKYQECIRR 239


Top