BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009479
         (1485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ...   356   8e-96
ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal doma...   350   7e-94
ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal doma...   347   6e-93
ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [S...   346   1e-92
gb|AFW77884.1| CPL3 [Zea mays]                                        342   1e-91

>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 478

 Score =  356 bits (914), Expect = 8e-96
 Identities = 177/296 (59%), Positives = 229/296 (77%), Gaps = 1/296 (0%)
 Frame = +2

Query: 599  ASSENEQCCLEGRHPGFFGDMCVRCGVIVNDASAVPVGYIHKNLKIVSDEMDRLRGSDLK 778
            ASS    C     HPG FGDMC+ CG  + + + V  GYIHK L++ +DE+ RLR +D+K
Sbjct: 104  ASSSKVACT----HPGSFGDMCILCGERLIEETGVTFGYIHKGLRLANDEIVRLRNTDMK 159

Query: 779  SLLRNRKXXXXXXXXXXXXNSTRLFDLSPEEDYLNNQIDSLQDIPKGSLFKLERMHMMTK 958
            +LLR+RK            NST+L  L+ EE+YL +QIDS+QD+  GSLF ++ MHMMTK
Sbjct: 160  NLLRHRKLYLVLDLDHTLLNSTQLMHLTAEEEYLKSQIDSMQDVSNGSLFMVDFMHMMTK 219

Query: 959  LRPFVRTFLREASSMYEMYIYTMGEKAYALQMADLLDPARVYFDCKVVSQADCTEKHQKG 1138
            LRPF+RTFL+EAS M+EMYIYTMG++AYAL+MA  LDP R YF+ +V+S+ D T++HQKG
Sbjct: 220  LRPFIRTFLKEASQMFEMYIYTMGDRAYALEMAKFLDPGREYFNARVISRDDGTQRHQKG 279

Query: 1139 LDVVLGADSAVVILDDTEFVWSKHRENLILMERYHFFASSGRQFGFRFKSLSESKIDESE 1318
            LD+VLG +SAV+ILDDTE  W+KH++NLILMERYHFFASS RQFGF  KSLS+ K DE+E
Sbjct: 280  LDIVLGQESAVLILDDTENAWTKHKDNLILMERYHFFASSCRQFGFECKSLSQLKSDENE 339

Query: 1319 AEGALANILNVLKRVHQMFFD-LEHDADGMSRDVRQVLKTVRQEILKGCRLVFSRV 1483
            ++GALA++L VL+R+H +FFD LE   DG  RDVRQVL TVR+++LKGC++VFSRV
Sbjct: 340  SDGALASVLKVLRRIHHIFFDELEDAIDG--RDVRQVLSTVRKDVLKGCKIVFSRV 393


>ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Glycine max]
          Length = 442

 Score =  350 bits (897), Expect = 7e-94
 Identities = 179/300 (59%), Positives = 221/300 (73%)
 Frame = +2

Query: 584  KQKSEASSENEQCCLEGRHPGFFGDMCVRCGVIVNDASAVPVGYIHKNLKIVSDEMDRLR 763
            K+  EASSE + CC    HPG FG+MC+RCG  ++  S V  GYIHK L++  +E+ RLR
Sbjct: 71   KRSLEASSEVDVCCT---HPGSFGNMCIRCGQKLDGESGVTFGYIHKGLRLHDEEISRLR 127

Query: 764  GSDLKSLLRNRKXXXXXXXXXXXXNSTRLFDLSPEEDYLNNQIDSLQDIPKGSLFKLERM 943
             +D+KSLL  +K            NST L  L+ EE +L NQ DSL ++ KGSLFKLE M
Sbjct: 128  NTDMKSLLGRKKLYLVLDLDHTLLNSTHLAQLTSEELHLLNQTDSLTNVSKGSLFKLEHM 187

Query: 944  HMMTKLRPFVRTFLREASSMYEMYIYTMGEKAYALQMADLLDPARVYFDCKVVSQADCTE 1123
            +MMTKLRPFVR FL+EAS M+EMYIYTMG++ YAL+MA LLDP   YF+ KV+S+ D T+
Sbjct: 188  NMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNAKVISRDDGTQ 247

Query: 1124 KHQKGLDVVLGADSAVVILDDTEFVWSKHRENLILMERYHFFASSGRQFGFRFKSLSESK 1303
            KHQKGLDVVLG +SAV+ILDDTE  W KH++NLILMERYHFF SS RQFGF  KSL+E K
Sbjct: 248  KHQKGLDVVLGQESAVIILDDTEHAWMKHKDNLILMERYHFFGSSCRQFGFNCKSLAELK 307

Query: 1304 IDESEAEGALANILNVLKRVHQMFFDLEHDADGMSRDVRQVLKTVRQEILKGCRLVFSRV 1483
             DE E +GALA IL VLK+VH MFFD + D D   +DVRQVL +VR+E+L GC ++FSR+
Sbjct: 308  SDEDETDGALAKILKVLKQVHCMFFDKQEDFD--DQDVRQVLSSVRREVLSGCVIIFSRI 365


>ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Glycine max]
          Length = 428

 Score =  347 bits (889), Expect = 6e-93
 Identities = 178/302 (58%), Positives = 221/302 (73%), Gaps = 2/302 (0%)
 Frame = +2

Query: 584  KQKSEASSENEQCCLEG--RHPGFFGDMCVRCGVIVNDASAVPVGYIHKNLKIVSDEMDR 757
            ++K E+  E E    EG   HPG FG+MC+RCG  ++  S V  GYIHK L++  +E+ R
Sbjct: 52   RRKFESIEETEGSTSEGVCTHPGSFGNMCIRCGQKLDGESGVTFGYIHKGLRLHDEEISR 111

Query: 758  LRGSDLKSLLRNRKXXXXXXXXXXXXNSTRLFDLSPEEDYLNNQIDSLQDIPKGSLFKLE 937
            LR +D+KSLL  +K            NST L  L+ EE +L NQ DSL+D+ KGSLFKLE
Sbjct: 112  LRNTDMKSLLCRKKLYLVLDLDHTLLNSTHLAHLTSEESHLLNQTDSLRDVSKGSLFKLE 171

Query: 938  RMHMMTKLRPFVRTFLREASSMYEMYIYTMGEKAYALQMADLLDPARVYFDCKVVSQADC 1117
             M+MMTKLRPFVR FL+EAS M+EMYIYTMG++ YAL+MA LLDP   YF+ KV+S+ D 
Sbjct: 172  HMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNAKVISRDDG 231

Query: 1118 TEKHQKGLDVVLGADSAVVILDDTEFVWSKHRENLILMERYHFFASSGRQFGFRFKSLSE 1297
            T+KHQKGLDVVLG +SAV+ILDDTE  W KH++NLILMERYHFF SS RQFGF  KSL+E
Sbjct: 232  TQKHQKGLDVVLGQESAVLILDDTEHAWMKHKDNLILMERYHFFGSSCRQFGFNCKSLAE 291

Query: 1298 SKIDESEAEGALANILNVLKRVHQMFFDLEHDADGMSRDVRQVLKTVRQEILKGCRLVFS 1477
             K DE+E +GALA IL VLK+VH MFFD + D D   RDVRQ+L  VR+E+L GC ++FS
Sbjct: 292  LKSDENETDGALAKILKVLKQVHCMFFDKQEDFD--DRDVRQMLSLVRREVLSGCVIIFS 349

Query: 1478 RV 1483
            R+
Sbjct: 350  RI 351


>ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [Sorghum bicolor]
            gi|241915584|gb|EER88728.1| hypothetical protein
            SORBIDRAFT_10g025580 [Sorghum bicolor]
          Length = 558

 Score =  346 bits (887), Expect = 1e-92
 Identities = 170/284 (59%), Positives = 218/284 (76%), Gaps = 2/284 (0%)
 Frame = +2

Query: 638  HPGFFGDMCVRCGVIVND--ASAVPVGYIHKNLKIVSDEMDRLRGSDLKSLLRNRKXXXX 811
            HPG+FG +C RCG   ++   S V  GYIHK L++ + E+DRLRG+DLK+LLR RK    
Sbjct: 109  HPGYFGGLCFRCGKPQDEENVSGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVLI 168

Query: 812  XXXXXXXXNSTRLFDLSPEEDYLNNQIDSLQDIPKGSLFKLERMHMMTKLRPFVRTFLRE 991
                    NST+L D+S  E  L  Q  + +D P  S+F L+ M M+TKLRPFVR FL+E
Sbjct: 169  LDLDHTLINSTKLQDISSAEKDLGIQTAASKDDPNRSIFSLDSMQMLTKLRPFVREFLKE 228

Query: 992  ASSMYEMYIYTMGEKAYALQMADLLDPARVYFDCKVVSQADCTEKHQKGLDVVLGADSAV 1171
            AS+M+EMYIYTMG+KAYA+++A LLDP+ +YF  KV+S +DCT++HQKGLDV+LGA+S  
Sbjct: 229  ASNMFEMYIYTMGDKAYAIEIAKLLDPSNIYFPSKVISNSDCTQRHQKGLDVILGAESVA 288

Query: 1172 VILDDTEFVWSKHRENLILMERYHFFASSGRQFGFRFKSLSESKIDESEAEGALANILNV 1351
            VILDDTE+VW KH+ENLILMERYHFFASS RQFGF  +SLSES  DE E++GALA +L+V
Sbjct: 289  VILDDTEYVWQKHKENLILMERYHFFASSCRQFGFGVRSLSESMQDERESDGALATVLDV 348

Query: 1352 LKRVHQMFFDLEHDADGMSRDVRQVLKTVRQEILKGCRLVFSRV 1483
            LKR+H +FFDL  + D  S+DVRQV+K VR+EIL+GC++VFSRV
Sbjct: 349  LKRIHSIFFDLAVETDLSSQDVRQVIKAVRKEILQGCKIVFSRV 392


>gb|AFW77884.1| CPL3 [Zea mays]
          Length = 533

 Score =  342 bits (878), Expect = 1e-91
 Identities = 169/284 (59%), Positives = 217/284 (76%), Gaps = 2/284 (0%)
 Frame = +2

Query: 638  HPGFFGDMCVRCGVIVN--DASAVPVGYIHKNLKIVSDEMDRLRGSDLKSLLRNRKXXXX 811
            HPG FG +C+ CG   +  D S V  GYIHK L++ + E+DRLRG+DLK+LLR RK    
Sbjct: 107  HPGHFGGLCIICGKPQDEEDVSGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVLI 166

Query: 812  XXXXXXXXNSTRLFDLSPEEDYLNNQIDSLQDIPKGSLFKLERMHMMTKLRPFVRTFLRE 991
                    NST+L D+S  E  L  Q  + +D P  S+F L+ M M+TKLRPFVR FL+E
Sbjct: 167  LDLDHTLINSTKLQDISSAEKDLGIQSAASKDDPNRSIFALDLMPMLTKLRPFVREFLKE 226

Query: 992  ASSMYEMYIYTMGEKAYALQMADLLDPARVYFDCKVVSQADCTEKHQKGLDVVLGADSAV 1171
            AS+M+EMYIYTMG+KAYA+++A LLDP+ +YF  KV+S +DCT++HQKGLDV+LGA+S  
Sbjct: 227  ASNMFEMYIYTMGDKAYAIEIAKLLDPSNIYFPSKVISNSDCTQRHQKGLDVILGAESVA 286

Query: 1172 VILDDTEFVWSKHRENLILMERYHFFASSGRQFGFRFKSLSESKIDESEAEGALANILNV 1351
            VILDDTE+VW KH+ENLILMERYHFFASS RQFGF  +SLSES  DE E++GALA +L+V
Sbjct: 287  VILDDTEYVWQKHKENLILMERYHFFASSCRQFGFGVRSLSESLQDERESDGALATVLDV 346

Query: 1352 LKRVHQMFFDLEHDADGMSRDVRQVLKTVRQEILKGCRLVFSRV 1483
            LKR+H  FFD+  + D  SRD+RQV+KT+R+EIL+GC++VFSRV
Sbjct: 347  LKRIHATFFDMAAETDLSSRDIRQVIKTLRKEILQGCKIVFSRV 390