BLASTX nr result

ID: Coptis24_contig00009478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009478
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536883.1| PREDICTED: probable WRKY transcription facto...    77   2e-12
ref|XP_002520995.1| WRKY transcription factor, putative [Ricinus...    75   4e-12
gb|ADL36862.1| WRKY domain class transcription factor [Malus x d...    75   7e-12
gb|AFK46919.1| unknown [Medicago truncatula]                           74   9e-12
ref|XP_002270614.1| PREDICTED: probable WRKY transcription facto...    73   3e-11

>ref|XP_003536883.1| PREDICTED: probable WRKY transcription factor 21-like [Glycine max]
          Length = 392

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
 Frame = +3

Query: 42  SCHRVLDVLSKPLDQNGYRNLXXXXXXXXXXXXXXXSLLSNGLGHGRVRKLKNLQVQPPF 221
           SCHRVL +LS+P DQ  +RNL               S+L NGLGH RVRKLKN Q+ P  
Sbjct: 50  SCHRVLSLLSQPRDQVQHRNLMVETGETVVRFKKVVSMLHNGLGHARVRKLKNPQI-PSS 108

Query: 222 PQNIFLDSPN--TLPPDSS----STKPVQFLQSDYQKNQIIEVGGSV 344
            Q+IFLD+PN  TL  +S+    S K + F Q+ Y  N + E G ++
Sbjct: 109 HQSIFLDNPNCKTLTNNSNNNHHSKKNLYFPQTSYPDNSVQEHGSTI 155


>ref|XP_002520995.1| WRKY transcription factor, putative [Ricinus communis]
           gi|223539832|gb|EEF41412.1| WRKY transcription factor,
           putative [Ricinus communis]
          Length = 353

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 52/107 (48%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = +3

Query: 42  SCHRVLDVLSKPLDQNGYRNLXXXXXXXXXXXXXXXSLLSNGLGHGRVRKLKNLQVQPPF 221
           SCHRVL +LSKP DQ  YRNL               SLL++GLGH RVRKLK L    P 
Sbjct: 14  SCHRVLSLLSKPQDQVQYRNLMAETGEAVFKFKRVISLLNSGLGHARVRKLKKLPT--PI 71

Query: 222 PQNIFLDSPNTLPPDSSSTKPVQFLQ-SDYQKNQIIEVGGSVGKMFL 359
            QNI LD+P+      S  K  QFLQ S Y  NQ I+  GS  K  L
Sbjct: 72  SQNILLDNPHHRTDHPS--KNYQFLQSSSYLDNQPIQELGSNSKSSL 116


>gb|ADL36862.1| WRKY domain class transcription factor [Malus x domestica]
          Length = 355

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/92 (45%), Positives = 54/92 (58%)
 Frame = +3

Query: 42  SCHRVLDVLSKPLDQNGYRNLXXXXXXXXXXXXXXXSLLSNGLGHGRVRKLKNLQVQPPF 221
           SCHRVL +LS+P +Q  YRNL               S+L+ GLGH RVRKLK LQ+  PF
Sbjct: 14  SCHRVLSLLSQPQEQVQYRNLTVETGKAVSRFKKVVSILNTGLGHARVRKLKKLQI--PF 71

Query: 222 PQNIFLDSPNTLPPDSSSTKPVQFLQSDYQKN 317
           P+ I LD+P ++    S T    FLQS + +N
Sbjct: 72  PERILLDNPISIADRPSKTP--HFLQSSFPEN 101


>gb|AFK46919.1| unknown [Medicago truncatula]
          Length = 360

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/102 (45%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
 Frame = +3

Query: 42  SCHRVLDVLSKPLDQNGYRNLXXXXXXXXXXXXXXXSLLSNGLGHGRVRKLKNLQVQPPF 221
           SCHRVL +LS+P DQ  +RNL               SLL +GL H RVRKLKNLQ   P+
Sbjct: 14  SCHRVLSMLSQPRDQVHHRNLTVETGEAVNRFKKVVSLL-HGLDHSRVRKLKNLQ-NVPY 71

Query: 222 PQNIFLDSPNTLPP-DSSSTKPVQFLQSDYQKNQIIEVGGSV 344
           PQ  FLD+PN      +  TK V F Q+ Y +N + E+G ++
Sbjct: 72  PQTAFLDNPNCKRNIINHHTKNVHFTQTTYPQNSVQELGSTL 113


>ref|XP_002270614.1| PREDICTED: probable WRKY transcription factor 74-like [Vitis
           vinifera]
          Length = 362

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
 Frame = +3

Query: 42  SCHRVLDVLSKPLDQNGYRNLXXXXXXXXXXXXXXXSLLSNGLGHGRVRKLKNLQVQPPF 221
           SCHRVL  L +P DQ  YRNL               SLL+NG GH RVRK + L  +   
Sbjct: 14  SCHRVLSFLCQPQDQVQYRNLMMETEEAVFKFKRVVSLLNNGFGHERVRKFRRL--RSSL 71

Query: 222 PQNIFLDSPNTLPPDSSSTKPVQFLQSDYQKNQIIEVGGS-------VGKMFLEN 365
           PQ+IFL++PN  P  + S KP+Q L +++ +N + E+            K+FLE+
Sbjct: 72  PQSIFLETPNYKP--NPSPKPLQLLPTNFLENPLPEIDSKAKSSLQITPKIFLES 124


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