BLASTX nr result

ID: Coptis24_contig00009472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009472
         (1795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33346.3| unnamed protein product [Vitis vinifera]              672   0.0  
ref|XP_002285639.1| PREDICTED: probable pectate lyase 15 [Vitis ...   672   0.0  
ref|XP_002297822.1| predicted protein [Populus trichocarpa] gi|1...   653   0.0  
ref|XP_002265100.1| PREDICTED: probable pectate lyase 15 [Vitis ...   650   0.0  
ref|XP_004134015.1| PREDICTED: probable pectate lyase 15-like [C...   649   0.0  

>emb|CBI33346.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  672 bits (1734), Expect = 0.0
 Identities = 320/403 (79%), Positives = 336/403 (83%)
 Frame = +3

Query: 3    NSNSTMLVEQSSDVANAKNEHAVDNPDEIASEVEMTIRNSTERRKLGFLSCGTGNPIDDC 182
            N  +  L   ++    A+NEHAVD+PD +AS V+M+IRNSTERRKLG+ SCGTGNPIDDC
Sbjct: 28   NGGTEQLQSSNNSSMAARNEHAVDDPDAVASMVDMSIRNSTERRKLGYFSCGTGNPIDDC 87

Query: 183  WRCDPKWQLNRKRLADCGIGFGRNAIGGRDGRFYXXXXXXXXXXXXXXXGTLRHAVIQDV 362
            WRCD  WQ NRKRLADCGIGFGRNAIGGRDGRFY               GTLRHAVIQD 
Sbjct: 88   WRCDHNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNPKPGTLRHAVIQDA 147

Query: 363  PLWIVFKRDMVITLKQELIMNSFKTIDGRGSNVHIANGACITIQFITNVIIHGLHIHDCK 542
            PLWIVFKRDMVITLKQELIMNSFKTIDGRG NVHIANGACIT+QF+TNVIIHGLHIHDCK
Sbjct: 148  PLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACITVQFVTNVIIHGLHIHDCK 207

Query: 543  PTGNALVRSSPSHFGWRTIADGDAVSIFGSSHIWVDHNSLSSCADGLVDAVMGSTAITIS 722
            PTGNA+VRSSPSHFGWRT+ADGDA+SIFGSSHIWVDHNSLSSCADGLVDAVMGSTAITIS
Sbjct: 208  PTGNAMVRSSPSHFGWRTMADGDAISIFGSSHIWVDHNSLSSCADGLVDAVMGSTAITIS 267

Query: 723  NNHFAHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAGLIQRMPRCRHGYFHVVNNDYTHW 902
            NNHFAHHNEVMLLGHSDSY RDKQMQVTIAYNHFG GLIQRMPRCRHGYFHVVNNDYTHW
Sbjct: 268  NNHFAHHNEVMLLGHSDSYERDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHW 327

Query: 903  EMYAIGGSASPTINSQGNRYLAPANPFAKEVTKRVDTGVGQWKGWNWRSEGDMLLNGAYF 1082
            EMYAIGGSASPTINSQGNRYLAP NPFAKEVTKRVDT  GQWKGWNWRSEGD+LLNGAYF
Sbjct: 328  EMYAIGGSASPTINSQGNRYLAPVNPFAKEVTKRVDTPSGQWKGWNWRSEGDLLLNGAYF 387

Query: 1083 VPXXXXXXXXXXXXXXXXXXXXXXXXXITSGAGVLSCRRGNQC 1211
             P                         ITS AG LSCRRG+QC
Sbjct: 388  TPSGAGASASYARASSLGAKSSSMVGSITSNAGALSCRRGSQC 430


>ref|XP_002285639.1| PREDICTED: probable pectate lyase 15 [Vitis vinifera]
          Length = 432

 Score =  672 bits (1734), Expect = 0.0
 Identities = 320/403 (79%), Positives = 336/403 (83%)
 Frame = +3

Query: 3    NSNSTMLVEQSSDVANAKNEHAVDNPDEIASEVEMTIRNSTERRKLGFLSCGTGNPIDDC 182
            N  +  L   ++    A+NEHAVD+PD +AS V+M+IRNSTERRKLG+ SCGTGNPIDDC
Sbjct: 30   NGGTEQLQSSNNSSMAARNEHAVDDPDAVASMVDMSIRNSTERRKLGYFSCGTGNPIDDC 89

Query: 183  WRCDPKWQLNRKRLADCGIGFGRNAIGGRDGRFYXXXXXXXXXXXXXXXGTLRHAVIQDV 362
            WRCD  WQ NRKRLADCGIGFGRNAIGGRDGRFY               GTLRHAVIQD 
Sbjct: 90   WRCDHNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNPKPGTLRHAVIQDA 149

Query: 363  PLWIVFKRDMVITLKQELIMNSFKTIDGRGSNVHIANGACITIQFITNVIIHGLHIHDCK 542
            PLWIVFKRDMVITLKQELIMNSFKTIDGRG NVHIANGACIT+QF+TNVIIHGLHIHDCK
Sbjct: 150  PLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACITVQFVTNVIIHGLHIHDCK 209

Query: 543  PTGNALVRSSPSHFGWRTIADGDAVSIFGSSHIWVDHNSLSSCADGLVDAVMGSTAITIS 722
            PTGNA+VRSSPSHFGWRT+ADGDA+SIFGSSHIWVDHNSLSSCADGLVDAVMGSTAITIS
Sbjct: 210  PTGNAMVRSSPSHFGWRTMADGDAISIFGSSHIWVDHNSLSSCADGLVDAVMGSTAITIS 269

Query: 723  NNHFAHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAGLIQRMPRCRHGYFHVVNNDYTHW 902
            NNHFAHHNEVMLLGHSDSY RDKQMQVTIAYNHFG GLIQRMPRCRHGYFHVVNNDYTHW
Sbjct: 270  NNHFAHHNEVMLLGHSDSYERDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHW 329

Query: 903  EMYAIGGSASPTINSQGNRYLAPANPFAKEVTKRVDTGVGQWKGWNWRSEGDMLLNGAYF 1082
            EMYAIGGSASPTINSQGNRYLAP NPFAKEVTKRVDT  GQWKGWNWRSEGD+LLNGAYF
Sbjct: 330  EMYAIGGSASPTINSQGNRYLAPVNPFAKEVTKRVDTPSGQWKGWNWRSEGDLLLNGAYF 389

Query: 1083 VPXXXXXXXXXXXXXXXXXXXXXXXXXITSGAGVLSCRRGNQC 1211
             P                         ITS AG LSCRRG+QC
Sbjct: 390  TPSGAGASASYARASSLGAKSSSMVGSITSNAGALSCRRGSQC 432


>ref|XP_002297822.1| predicted protein [Populus trichocarpa] gi|118488789|gb|ABK96205.1|
            unknown [Populus trichocarpa] gi|222845080|gb|EEE82627.1|
            predicted protein [Populus trichocarpa]
          Length = 450

 Score =  653 bits (1685), Expect = 0.0
 Identities = 310/404 (76%), Positives = 331/404 (81%), Gaps = 1/404 (0%)
 Frame = +3

Query: 3    NSNSTMLVEQSSDVANAKNEHAV-DNPDEIASEVEMTIRNSTERRKLGFLSCGTGNPIDD 179
            +S++T +  +S + A+A NE AV DNP+E+ S VEM+IRNSTERR+LG+ SCGTGNPIDD
Sbjct: 47   SSSNTTMAARSQEEADALNEKAVADNPEEVVSMVEMSIRNSTERRRLGYFSCGTGNPIDD 106

Query: 180  CWRCDPKWQLNRKRLADCGIGFGRNAIGGRDGRFYXXXXXXXXXXXXXXXGTLRHAVIQD 359
            CWRCDP WQ NRKRLADCGIGFGRNAIGGRDGRFY               GTLRHAVIQD
Sbjct: 107  CWRCDPNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPSDNDPVNPRPGTLRHAVIQD 166

Query: 360  VPLWIVFKRDMVITLKQELIMNSFKTIDGRGSNVHIANGACITIQFITNVIIHGLHIHDC 539
             PLWIVFKRDMVI LKQELIMNSFKTIDGRG NVHIANG CITIQF+TNVIIHGLHIHDC
Sbjct: 167  APLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHIANGGCITIQFVTNVIIHGLHIHDC 226

Query: 540  KPTGNALVRSSPSHFGWRTIADGDAVSIFGSSHIWVDHNSLSSCADGLVDAVMGSTAITI 719
            KPTGNA+VRSSPSH+GWRT+ADGDAVSIFGSSHIWVDHNSLS+CADGLVDAVMGSTAIT+
Sbjct: 227  KPTGNAMVRSSPSHYGWRTMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITV 286

Query: 720  SNNHFAHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAGLIQRMPRCRHGYFHVVNNDYTH 899
            SNNHF HHNEVMLLGHSDSY RDKQMQVTIAYNHFG GLIQRMPRCRHGYFHVVNNDYTH
Sbjct: 287  SNNHFTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTH 346

Query: 900  WEMYAIGGSASPTINSQGNRYLAPANPFAKEVTKRVDTGVGQWKGWNWRSEGDMLLNGAY 1079
            WEMYAIGGSA PTINSQGNRY AP NPFAKEVTKRVDT  G WK WNWRSEGD+LLNGAY
Sbjct: 347  WEMYAIGGSAEPTINSQGNRYNAPVNPFAKEVTKRVDTAAGYWKNWNWRSEGDLLLNGAY 406

Query: 1080 FVPXXXXXXXXXXXXXXXXXXXXXXXXXITSGAGVLSCRRGNQC 1211
            F P                         +T+ AG L CRR  QC
Sbjct: 407  FTPSGAGASSSYARASSLGAKSSSMVGAMTANAGALGCRRARQC 450


>ref|XP_002265100.1| PREDICTED: probable pectate lyase 15 [Vitis vinifera]
            gi|297744293|emb|CBI37263.3| unnamed protein product
            [Vitis vinifera]
          Length = 445

 Score =  650 bits (1676), Expect = 0.0
 Identities = 311/402 (77%), Positives = 331/402 (82%), Gaps = 1/402 (0%)
 Frame = +3

Query: 9    NSTMLVE-QSSDVANAKNEHAVDNPDEIASEVEMTIRNSTERRKLGFLSCGTGNPIDDCW 185
            NSTM      S+  N +NEHAV+NP+E+AS V+M+IRNSTERR LG+ SCGTGNPIDDCW
Sbjct: 44   NSTMAERLDKSEGWNERNEHAVENPEEVASMVDMSIRNSTERRNLGYFSCGTGNPIDDCW 103

Query: 186  RCDPKWQLNRKRLADCGIGFGRNAIGGRDGRFYXXXXXXXXXXXXXXXGTLRHAVIQDVP 365
            RCDP WQL+RKRLADCGIGFGRNAIGGRDGR+Y               GTLRHAVIQD P
Sbjct: 104  RCDPHWQLHRKRLADCGIGFGRNAIGGRDGRYYVVTDPGDYDAVNPRPGTLRHAVIQDKP 163

Query: 366  LWIVFKRDMVITLKQELIMNSFKTIDGRGSNVHIANGACITIQFITNVIIHGLHIHDCKP 545
            LWIVFKRDMVI LKQELIMNSFKTID RG NVHIANGACITIQFITNVIIHGL+IHDCKP
Sbjct: 164  LWIVFKRDMVIKLKQELIMNSFKTIDARGVNVHIANGACITIQFITNVIIHGLNIHDCKP 223

Query: 546  TGNALVRSSPSHFGWRTIADGDAVSIFGSSHIWVDHNSLSSCADGLVDAVMGSTAITISN 725
            TGNA+VRSSPSH+GWRT+ADGD +SIFGSSHIW+DHNSLS+CADGL+DAVMGSTAITISN
Sbjct: 224  TGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMGSTAITISN 283

Query: 726  NHFAHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAGLIQRMPRCRHGYFHVVNNDYTHWE 905
            N+F HHNEVMLLGHSDSY RDKQMQVTIAYNHFG GLIQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 284  NYFTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWE 343

Query: 906  MYAIGGSASPTINSQGNRYLAPANPFAKEVTKRVDTGVGQWKGWNWRSEGDMLLNGAYFV 1085
            MYAIGGSA PTINSQGNRYLAPANPFAKEVTKRV T    WK WNWRSEGD+LLNGAYF 
Sbjct: 344  MYAIGGSAEPTINSQGNRYLAPANPFAKEVTKRVITSNSVWKHWNWRSEGDLLLNGAYFT 403

Query: 1086 PXXXXXXXXXXXXXXXXXXXXXXXXXITSGAGVLSCRRGNQC 1211
            P                         ITSGAG LSCRRG QC
Sbjct: 404  PSGAGAAASYARASSLGAKSSSMVGTITSGAGALSCRRGRQC 445


>ref|XP_004134015.1| PREDICTED: probable pectate lyase 15-like [Cucumis sativus]
            gi|449487510|ref|XP_004157662.1| PREDICTED: probable
            pectate lyase 15-like [Cucumis sativus]
          Length = 447

 Score =  649 bits (1673), Expect = 0.0
 Identities = 307/403 (76%), Positives = 335/403 (83%)
 Frame = +3

Query: 3    NSNSTMLVEQSSDVANAKNEHAVDNPDEIASEVEMTIRNSTERRKLGFLSCGTGNPIDDC 182
            +SNSTM V +  +  +  NEHAVDNP+EIA+ V+M+IRN+T RR+LGF SCGTGNPIDDC
Sbjct: 46   SSNSTMAV-RLDEAKDLGNEHAVDNPEEIAAMVDMSIRNATARRELGFFSCGTGNPIDDC 104

Query: 183  WRCDPKWQLNRKRLADCGIGFGRNAIGGRDGRFYXXXXXXXXXXXXXXXGTLRHAVIQDV 362
            WRCDP WQ NRKRLADCGIGFGRNAIGGRDGRFY               GTLRHAVIQD 
Sbjct: 105  WRCDPNWQQNRKRLADCGIGFGRNAIGGRDGRFYVVTDSGDDNPVNPKPGTLRHAVIQDE 164

Query: 363  PLWIVFKRDMVITLKQELIMNSFKTIDGRGSNVHIANGACITIQFITNVIIHGLHIHDCK 542
            PLWIVFKRDMVI LKQELIMNSFKTID RG+NVHIANGAC+TIQF+TNVI+HGL+IHDCK
Sbjct: 165  PLWIVFKRDMVIQLKQELIMNSFKTIDARGTNVHIANGACLTIQFVTNVIVHGLNIHDCK 224

Query: 543  PTGNALVRSSPSHFGWRTIADGDAVSIFGSSHIWVDHNSLSSCADGLVDAVMGSTAITIS 722
            PTGNA+VRSSP+H GWRTIADGDA+SIFGSSHIW+DHNSLS+CADGLVDAVMGSTAITIS
Sbjct: 225  PTGNAMVRSSPNHVGWRTIADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITIS 284

Query: 723  NNHFAHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGAGLIQRMPRCRHGYFHVVNNDYTHW 902
            NN+F HHNEVMLLGHSDSYVRDK MQVTIAYNHFG GLIQRMPRCRHGYFHVVNNDYTHW
Sbjct: 285  NNYFTHHNEVMLLGHSDSYVRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHW 344

Query: 903  EMYAIGGSASPTINSQGNRYLAPANPFAKEVTKRVDTGVGQWKGWNWRSEGDMLLNGAYF 1082
            EMYAIGGSA+PTINSQGNRY AP NPFAKEVTKRV+T   +WKGWNWRSEGD+LLNGA+F
Sbjct: 345  EMYAIGGSANPTINSQGNRYAAPTNPFAKEVTKRVETSESEWKGWNWRSEGDLLLNGAFF 404

Query: 1083 VPXXXXXXXXXXXXXXXXXXXXXXXXXITSGAGVLSCRRGNQC 1211
            +P                         ITS AG LSCRRG+ C
Sbjct: 405  IPSGAGASSSYARASSLGAKSSSMVGTITSNAGALSCRRGHAC 447


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