BLASTX nr result

ID: Coptis24_contig00009471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009471
         (1921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vi...   734   0.0  
ref|XP_002308217.1| predicted protein [Populus trichocarpa] gi|2...   729   0.0  
ref|XP_002323579.1| predicted protein [Populus trichocarpa] gi|2...   727   0.0  
ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-lik...   726   0.0  
ref|XP_003529151.1| PREDICTED: LIMR family protein At5g01460-lik...   724   0.0  

>ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vitis vinifera]
            gi|297740207|emb|CBI30389.3| unnamed protein product
            [Vitis vinifera]
          Length = 509

 Score =  734 bits (1896), Expect = 0.0
 Identities = 383/508 (75%), Positives = 404/508 (79%)
 Frame = -3

Query: 1868 MGDFNXXXXXXXXXXXXXXXLFNIYLLVNYQHPDDANQSYFPKFVVVFGLSVAAISILML 1689
            MGDFN               LFNIYLLVNYQHPDDANQ+YFPKFVVV GLS+AAISILML
Sbjct: 1    MGDFNLALVIVAIVVCVLVFLFNIYLLVNYQHPDDANQAYFPKFVVVLGLSIAAISILML 60

Query: 1688 PADVANRQACRHAIYNGACNLTLPMKSLWLVIYIVDAVLVFFVIPFAIFYYEGDQDKSVG 1509
            PADVANRQACRHAIYNGACN TLPM+ LWL IYIVDAVLVFFVIPFA+FYYEGDQDKSVG
Sbjct: 61   PADVANRQACRHAIYNGACNFTLPMRDLWLAIYIVDAVLVFFVIPFAMFYYEGDQDKSVG 120

Query: 1508 KRIKSALLWVVTTAIXXXXXXXXXXXXXXXVDFTVRHLXXXXXXXXXXXXXXSRNQPCTS 1329
            KRIKSALLWV+TTAI               VDFTVRHL              S +Q C  
Sbjct: 121  KRIKSALLWVITTAIVCALVLGILYGLVGKVDFTVRHLSSSTTSFPTSWELSS-SQQCIG 179

Query: 1328 SSFHQCSAYSPSDTSVKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIASLPLGLIFSF 1149
            S  HQCSAYS S +S KTWTMRTTFPEYVVALATIVGSVLF+IFGGVGIA LPLGLIFSF
Sbjct: 180  SGTHQCSAYSASASSEKTWTMRTTFPEYVVALATIVGSVLFSIFGGVGIACLPLGLIFSF 239

Query: 1148 IRRPKAVITRSQYIKEATELGKKAKELRKAADALRQEEKSGSKGRKWRKNXXXXXXXXXX 969
            IRRPKAVITRSQYIKEATELGKKA++L+KAADAL QEE+SGSKGRKWRKN          
Sbjct: 240  IRRPKAVITRSQYIKEATELGKKARDLKKAADALHQEERSGSKGRKWRKNVKAVEKELLQ 299

Query: 968  XXXXXXXXXEMYPQGEKAETAWALTVIGYLAKXXXXXXXXXXXVAWVAHIVIYLLINPPL 789
                     EMYPQGEKAET WALTV+GYLAK           VAW+AHIVIYLLI+PPL
Sbjct: 300  LEDDVKALEEMYPQGEKAETTWALTVLGYLAKLVLGILGLIVSVAWIAHIVIYLLIDPPL 359

Query: 788  SPFLNEVFIKLDDLWGLLGTAAFAFFCFYLLVAVIAGAMMLGLRLVFITIHPMKWGATLM 609
            SPFLNEVFIKLDD+WGLLGTAAFAFFCFYLL+AVIAGAMMLGLRLVFITIHPMKWGATLM
Sbjct: 360  SPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLM 419

Query: 608  NSFLFNVGLILLCSISVIQFCXXXXXXXXXXXXXQEIFGHTLQSLRGIKYLYKYNVFQIA 429
            NSFLFNVGLILLCSISVIQFC             QEIFGHTL+SL+GIKYLYKYNVFQIA
Sbjct: 420  NSFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLESLKGIKYLYKYNVFQIA 479

Query: 428  FVVLAGLTFVYYIAFGWRRRKPSGRFQL 345
            F+VLAGLTFVYY AFGWRRR+PSGRFQL
Sbjct: 480  FIVLAGLTFVYYAAFGWRRRRPSGRFQL 507


>ref|XP_002308217.1| predicted protein [Populus trichocarpa] gi|222854193|gb|EEE91740.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  729 bits (1883), Expect = 0.0
 Identities = 379/508 (74%), Positives = 400/508 (78%)
 Frame = -3

Query: 1868 MGDFNXXXXXXXXXXXXXXXLFNIYLLVNYQHPDDANQSYFPKFVVVFGLSVAAISILML 1689
            MGDFN               LFN+YLLVNYQHPDD NQ+YFPKFVVVFGLSVAAISILML
Sbjct: 1    MGDFNLALVIVAIVVCIIVLLFNVYLLVNYQHPDDKNQAYFPKFVVVFGLSVAAISILML 60

Query: 1688 PADVANRQACRHAIYNGACNLTLPMKSLWLVIYIVDAVLVFFVIPFAIFYYEGDQDKSVG 1509
            PADVANRQACRHAIYNGACNLTLPMK LW+ +YIVDAVLVFF+IPFA+FYYEGDQDKSV 
Sbjct: 61   PADVANRQACRHAIYNGACNLTLPMKDLWIAVYIVDAVLVFFIIPFAMFYYEGDQDKSVA 120

Query: 1508 KRIKSALLWVVTTAIXXXXXXXXXXXXXXXVDFTVRHLXXXXXXXXXXXXXXSRNQPCTS 1329
            KRIKSALLWV+TTAI               VDFTVRHL                +QPC  
Sbjct: 121  KRIKSALLWVITTAIVCGLVLGILYGVIGKVDFTVRHLSSTTTTFPSTWDFSG-SQPCIG 179

Query: 1328 SSFHQCSAYSPSDTSVKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIASLPLGLIFSF 1149
            S  HQCSAY  + +S KTWTMR TFPEYVVALATIVGSVLFAIFGGVGIA LPLGLIFSF
Sbjct: 180  SGPHQCSAYLANASSEKTWTMRATFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSF 239

Query: 1148 IRRPKAVITRSQYIKEATELGKKAKELRKAADALRQEEKSGSKGRKWRKNXXXXXXXXXX 969
            IRRPKAVITRSQYIKEATE GKKA+EL+KAADAL QEE+SGSKGRKWRKN          
Sbjct: 240  IRRPKAVITRSQYIKEATEFGKKARELKKAADALHQEERSGSKGRKWRKNVKSVEKELLQ 299

Query: 968  XXXXXXXXXEMYPQGEKAETAWALTVIGYLAKXXXXXXXXXXXVAWVAHIVIYLLINPPL 789
                     EMYPQGEKAETAWALTV+GYLAK           VAWVAHI+IYLL++PPL
Sbjct: 300  LEEDVKLLEEMYPQGEKAETAWALTVLGYLAKLVLGILGLIVSVAWVAHIIIYLLVDPPL 359

Query: 788  SPFLNEVFIKLDDLWGLLGTAAFAFFCFYLLVAVIAGAMMLGLRLVFITIHPMKWGATLM 609
            SPFLNEVFIKLDD+WGLLGT AFAFFCFYLL+AVIAGAMMLGLRLVFITIHPMKWGATLM
Sbjct: 360  SPFLNEVFIKLDDIWGLLGTVAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLM 419

Query: 608  NSFLFNVGLILLCSISVIQFCXXXXXXXXXXXXXQEIFGHTLQSLRGIKYLYKYNVFQIA 429
            NSFLFNVGLILLCSISVIQFC             QEIFGHTLQSLRGIKYLYKYNVFQI+
Sbjct: 420  NSFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIS 479

Query: 428  FVVLAGLTFVYYIAFGWRRRKPSGRFQL 345
            FVVLAGLTFVYY AFGWRR+K SGRFQL
Sbjct: 480  FVVLAGLTFVYYAAFGWRRKKRSGRFQL 507


>ref|XP_002323579.1| predicted protein [Populus trichocarpa] gi|222868209|gb|EEF05340.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  727 bits (1877), Expect = 0.0
 Identities = 378/508 (74%), Positives = 399/508 (78%)
 Frame = -3

Query: 1868 MGDFNXXXXXXXXXXXXXXXLFNIYLLVNYQHPDDANQSYFPKFVVVFGLSVAAISILML 1689
            MGDFN               LFNIYLLVNYQHPDD NQ+YFPKFVVVFGL VA ISILML
Sbjct: 1    MGDFNLALVIVAIVVCIIVFLFNIYLLVNYQHPDDKNQAYFPKFVVVFGLFVATISILML 60

Query: 1688 PADVANRQACRHAIYNGACNLTLPMKSLWLVIYIVDAVLVFFVIPFAIFYYEGDQDKSVG 1509
            PADVANRQACRHAIYNGACNLTLPMK LW+ +YIVDAVLVFF+IPFA+FYYEGDQDKSV 
Sbjct: 61   PADVANRQACRHAIYNGACNLTLPMKDLWIAVYIVDAVLVFFIIPFAMFYYEGDQDKSVA 120

Query: 1508 KRIKSALLWVVTTAIXXXXXXXXXXXXXXXVDFTVRHLXXXXXXXXXXXXXXSRNQPCTS 1329
            KRIKSALLWV+TTAI               VDFTVRHL               RNQPC  
Sbjct: 121  KRIKSALLWVITTAIVCGLVLGILYGLVGKVDFTVRHLSSTTTTFPSTWEFS-RNQPCIG 179

Query: 1328 SSFHQCSAYSPSDTSVKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIASLPLGLIFSF 1149
            S   +CSAY  + +S KTWTMR TFPEYVVALATIVGSVLFAIFGGVGIA LPLGLIFSF
Sbjct: 180  SVARECSAYLANASSEKTWTMRATFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSF 239

Query: 1148 IRRPKAVITRSQYIKEATELGKKAKELRKAADALRQEEKSGSKGRKWRKNXXXXXXXXXX 969
            IRRPKAVITRSQYIKEATELGKKA+EL+KAAD L QEE+SG+KGRKWRKN          
Sbjct: 240  IRRPKAVITRSQYIKEATELGKKARELKKAADVLHQEERSGNKGRKWRKNVKAVEKELLQ 299

Query: 968  XXXXXXXXXEMYPQGEKAETAWALTVIGYLAKXXXXXXXXXXXVAWVAHIVIYLLINPPL 789
                     E+YPQGEKAET+WALTV+GYLAK           VAWVAHI+IYLLI+PPL
Sbjct: 300  LEEDVKLLEEVYPQGEKAETSWALTVLGYLAKLVLGILGLIVSVAWVAHIIIYLLIDPPL 359

Query: 788  SPFLNEVFIKLDDLWGLLGTAAFAFFCFYLLVAVIAGAMMLGLRLVFITIHPMKWGATLM 609
            SPFLNEVFIKLDD+WGLLGT AFAFFCFYLL+AVIAGAMMLGLRLVFITIHPMKWGATLM
Sbjct: 360  SPFLNEVFIKLDDIWGLLGTVAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLM 419

Query: 608  NSFLFNVGLILLCSISVIQFCXXXXXXXXXXXXXQEIFGHTLQSLRGIKYLYKYNVFQIA 429
            NSFLFNVGLILLCSISVIQFC             QEIFGHTLQSLRGIKYLYKYNVFQIA
Sbjct: 420  NSFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIA 479

Query: 428  FVVLAGLTFVYYIAFGWRRRKPSGRFQL 345
            FVVLAGLTFVYY AFGWRR+KPSGRFQL
Sbjct: 480  FVVLAGLTFVYYAAFGWRRKKPSGRFQL 507


>ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-like [Glycine max]
          Length = 509

 Score =  726 bits (1874), Expect = 0.0
 Identities = 380/508 (74%), Positives = 404/508 (79%)
 Frame = -3

Query: 1868 MGDFNXXXXXXXXXXXXXXXLFNIYLLVNYQHPDDANQSYFPKFVVVFGLSVAAISILML 1689
            MGDFN               L N+YLLVNYQHPDDANQ+YFPKFVVV GLSVAAISILML
Sbjct: 1    MGDFNLALVIVAVVVCVIVFLVNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILML 60

Query: 1688 PADVANRQACRHAIYNGACNLTLPMKSLWLVIYIVDAVLVFFVIPFAIFYYEGDQDKSVG 1509
            PADVANRQACRHAIYNGAC+LTLPMK LWL +YI+DAVLVFFVIPFA+F+YEGDQDKSVG
Sbjct: 61   PADVANRQACRHAIYNGACSLTLPMKDLWLAVYILDAVLVFFVIPFAMFFYEGDQDKSVG 120

Query: 1508 KRIKSALLWVVTTAIXXXXXXXXXXXXXXXVDFTVRHLXXXXXXXXXXXXXXSRNQPCTS 1329
            KRIKSALLW+VTTAI               VDFTVRHL              S  QPC  
Sbjct: 121  KRIKSALLWMVTTAIVCALVLGILYGLVGKVDFTVRHLSSSTTSFPSTWTFSS-GQPCIG 179

Query: 1328 SSFHQCSAYSPSDTSVKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIASLPLGLIFSF 1149
            +  HQCSA+S S +S KTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIA LPLGLIFSF
Sbjct: 180  NGAHQCSAFSASPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSF 239

Query: 1148 IRRPKAVITRSQYIKEATELGKKAKELRKAADALRQEEKSGSKGRKWRKNXXXXXXXXXX 969
            IRRPKAVITRSQYIKEATELGKKA+EL+KAA+AL QEE+SGSKGRK+RKN          
Sbjct: 240  IRRPKAVITRSQYIKEATELGKKARELKKAAEALHQEERSGSKGRKFRKNVKEVEKELFQ 299

Query: 968  XXXXXXXXXEMYPQGEKAETAWALTVIGYLAKXXXXXXXXXXXVAWVAHIVIYLLINPPL 789
                     E+YPQGEKAET WALTV+GYLAK           VAWVAHI+IYLLI+PPL
Sbjct: 300  LEEDVKLLEEVYPQGEKAETTWALTVLGYLAKFVLGILGLIVSVAWVAHIIIYLLIDPPL 359

Query: 788  SPFLNEVFIKLDDLWGLLGTAAFAFFCFYLLVAVIAGAMMLGLRLVFITIHPMKWGATLM 609
            SPFLNEVFIKLDD+WGLLGTAAFAFFCFYLL+AVIAGAMMLGLRLVFITIHPMKWGATLM
Sbjct: 360  SPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLM 419

Query: 608  NSFLFNVGLILLCSISVIQFCXXXXXXXXXXXXXQEIFGHTLQSLRGIKYLYKYNVFQIA 429
            NSFLFNVGLILLCSISVIQFC             QEIFGHTL+SLRGIKYLYKYNVFQIA
Sbjct: 420  NSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIA 479

Query: 428  FVVLAGLTFVYYIAFGWRRRKPSGRFQL 345
            FVVLAGLTFVYY AFGWRR+KPSGRFQL
Sbjct: 480  FVVLAGLTFVYYAAFGWRRKKPSGRFQL 507


>ref|XP_003529151.1| PREDICTED: LIMR family protein At5g01460-like [Glycine max]
          Length = 509

 Score =  724 bits (1870), Expect = 0.0
 Identities = 378/508 (74%), Positives = 402/508 (79%)
 Frame = -3

Query: 1868 MGDFNXXXXXXXXXXXXXXXLFNIYLLVNYQHPDDANQSYFPKFVVVFGLSVAAISILML 1689
            MGDFN               L N+YLLVNYQHPDDANQ+YFPKFVVV GLSVAAISILML
Sbjct: 1    MGDFNLALVIVAVVVCVIVFLVNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILML 60

Query: 1688 PADVANRQACRHAIYNGACNLTLPMKSLWLVIYIVDAVLVFFVIPFAIFYYEGDQDKSVG 1509
            PADVANRQACRHAIYNGAC+LTLPMK LWL +YI+DAVLVFFVIPFA+F+YEGDQDKSVG
Sbjct: 61   PADVANRQACRHAIYNGACSLTLPMKDLWLAVYILDAVLVFFVIPFAMFFYEGDQDKSVG 120

Query: 1508 KRIKSALLWVVTTAIXXXXXXXXXXXXXXXVDFTVRHLXXXXXXXXXXXXXXSRNQPCTS 1329
            KRIKSAL+W+VTTAI               VDFT+RHL              S  QPC  
Sbjct: 121  KRIKSALMWMVTTAIVCALVLGILYGLVGKVDFTIRHLSSSTTSFPSTWTFSS-GQPCIG 179

Query: 1328 SSFHQCSAYSPSDTSVKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIASLPLGLIFSF 1149
            S  HQCSA+S S +S KTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIA LPLGLIFSF
Sbjct: 180  SDAHQCSAFSASPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSF 239

Query: 1148 IRRPKAVITRSQYIKEATELGKKAKELRKAADALRQEEKSGSKGRKWRKNXXXXXXXXXX 969
            IRRPKAVITRSQYIKEATELGKKA+EL+KAA+AL QEE+SGSKGRK+RKN          
Sbjct: 240  IRRPKAVITRSQYIKEATELGKKARELKKAAEALHQEERSGSKGRKFRKNVKEVEKELFQ 299

Query: 968  XXXXXXXXXEMYPQGEKAETAWALTVIGYLAKXXXXXXXXXXXVAWVAHIVIYLLINPPL 789
                     EMYPQGEKAET WALTV+GYLAK           VAWV HI+IYLLI+PPL
Sbjct: 300  LEEDVKLLEEMYPQGEKAETTWALTVLGYLAKFVLGILGLIVSVAWVTHIIIYLLIDPPL 359

Query: 788  SPFLNEVFIKLDDLWGLLGTAAFAFFCFYLLVAVIAGAMMLGLRLVFITIHPMKWGATLM 609
            SPFLNEVFIKLDD+WGLLGTAAFAFFCFYLL+AVIAGAMMLGLRLVFITIHPMKWG TLM
Sbjct: 360  SPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGGTLM 419

Query: 608  NSFLFNVGLILLCSISVIQFCXXXXXXXXXXXXXQEIFGHTLQSLRGIKYLYKYNVFQIA 429
            NSFLFNVGLILLCSISVIQFC             QEIFGHTL+SLRGIKYLYKYNVFQIA
Sbjct: 420  NSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIA 479

Query: 428  FVVLAGLTFVYYIAFGWRRRKPSGRFQL 345
            FVVLAGLTFVYY AFGWRR+KPSGRFQL
Sbjct: 480  FVVLAGLTFVYYAAFGWRRKKPSGRFQL 507


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