BLASTX nr result

ID: Coptis24_contig00009470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009470
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15050.1| glutamate receptor 2.3 [Solanum lycopersicum]          78   2e-12
emb|CBI23983.3| unnamed protein product [Vitis vinifera]               75   1e-11
dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]          74   3e-11
dbj|BAL15049.1| glutamate receptor 2.2 [Solanum lycopersicum]          74   4e-11
ref|XP_002270975.1| PREDICTED: glutamate receptor 2.7-like [Viti...    74   4e-11

>dbj|BAL15050.1| glutamate receptor 2.3 [Solanum lycopersicum]
          Length = 962

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
 Frame = -1

Query: 710  GDKMEAIDREWFGQQVSCQEQ-GTTTSESLTLDSFKGLFMIAGXXXXXXXXXXXXXXLYE 534
            GD M  I ++WFG +  C +Q G   + SLTLDSFKGLF+IAG              LY+
Sbjct: 801  GDAMNEIIQKWFGNETECPKQDGMAIASSLTLDSFKGLFLIAGVSAGSALLLFFLIFLYQ 860

Query: 533  HRNIITSECSVSQKISAMAVEFDKEKDISSRGSKKIDFLSARTTDGRESCV---AECNVS 363
            +R I+ ++ S+ +K+ ++A  FD E+D S+  S K        ++G ES     AE   S
Sbjct: 861  NREILATDDSIRKKLCSIAEVFDSERDNSNSQSTK-------PSEGNESLTAVFAESEAS 913

Query: 362  TPQSPATIVCVHEDTVFSTEGSTPSTD 282
            T  SP   + + E  +    G +P+T+
Sbjct: 914  TEISPNLPLQIPEIGISHGLGESPATE 940


>emb|CBI23983.3| unnamed protein product [Vitis vinifera]
          Length = 1772

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
 Frame = -1

Query: 710  GDKMEAIDREWFGQQVSCQE-QGTTTSESLTLDSFKGLFMIAGXXXXXXXXXXXXXXLYE 534
            G KM   ++ WFGQ  SC E   + +S S+ L+SF GLF+IAG              LYE
Sbjct: 659  GAKMLQFEKAWFGQTPSCPELTNSVSSNSIGLNSFWGLFLIAGIASFVALITCITTFLYE 718

Query: 533  HRNI---ITSECSVSQKISAMAVEFDKEKDISSRGSKKIDFLSARTTDGRESCVAECNVS 363
            +R+    + S  S+ +KI AM   FD +KD+ S   ++ D L     D +  C      +
Sbjct: 719  NRDALINLNSPSSIWRKIKAMVTRFD-DKDLRSHTFRESDQLQ----DEQHQCHGCSYTN 773

Query: 362  TPQSPAT-IVCVHEDTVFSTEGSTPSTDHSTPI 267
             P SP+T ++  H ++ F  E  TPS+ H+ P+
Sbjct: 774  FPPSPSTLLIPTHNNSAFFGEQGTPSSGHADPV 806


>dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]
          Length = 965

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
 Frame = -1

Query: 710  GDKMEAIDREWFGQQVSCQEQ-GTTTSESLTLDSFKGLFMIAGXXXXXXXXXXXXXXLYE 534
            G+ M  I ++WFG +  C +Q G   + SLTLDSFKGLF+IAG              LY+
Sbjct: 803  GEFMNNIIQKWFGNETECPKQDGMVIASSLTLDSFKGLFLIAGVSAGSALLLFFLIFLYQ 862

Query: 533  HRNIITSECSVSQKISAMAVEFDKEKDISSRGSKKIDFLSARTTDGRE----SCVAECNV 366
            +R I+ ++ SV QK+ A+A  FDKEKD         + +S + ++G E    +  AE   
Sbjct: 863  NREILATDDSVWQKLCAIANAFDKEKD-------NPNSMSQKPSEGNEIQTATLFAESEA 915

Query: 365  STPQSPATIVCVHEDTVFSTEGSTP------STDHSTPIRD 261
            ST   P   +   E  +    G++P      +T+  TP+ +
Sbjct: 916  STEILPNLSLQSPEIKISDGLGASPPPEGFSTTEPGTPVHE 956


>dbj|BAL15049.1| glutamate receptor 2.2 [Solanum lycopersicum]
          Length = 980

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 37/96 (38%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -1

Query: 710  GDKMEAIDREWFGQQVSCQEQGTT--TSESLTLDSFKGLFMIAGXXXXXXXXXXXXXXLY 537
            G+ M ++ ++WFG +  C +   T  TS+SLTLDSFKGLF+IAG              +Y
Sbjct: 820  GEFMNSVIQKWFGNETDCTQNDETDITSDSLTLDSFKGLFLIAGVSAGSALLLFFLNFVY 879

Query: 536  EHRNIITSECSVSQKISAMAVEFDKEKDISSRGSKK 429
            ++R I+ ++ S+ +K++A+A  FD+EKD S+  S++
Sbjct: 880  QNREILATDDSICKKLTAIAKVFDQEKDDSNSTSEE 915


>ref|XP_002270975.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 926

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
 Frame = -1

Query: 710  GDKMEAIDREWFGQQVSCQE-QGTTTSESLTLDSFKGLFMIAGXXXXXXXXXXXXXXLYE 534
            G KM   ++ WFGQ  SC E   + +S S+ L+SF GLF+IAG              LYE
Sbjct: 766  GAKMVQFEKAWFGQTPSCPELTSSVSSNSIGLNSFWGLFLIAGVASFVALIICITTFLYE 825

Query: 533  HRNIIT---SECSVSQKISAMAVEFDKEKDISSRGSKKIDFLSARTTDGRESCVAECNVS 363
            +R+ +       SV +KI AMA  FD  KD+SS   +K + +     +G ++  A    +
Sbjct: 826  NRDTLVHLDPPASVWRKIKAMATRFD-HKDLSSHTFRKSEMVDRSGINGMDAVTASPATN 884

Query: 362  TPQSPATI-VCVHEDTVFSTEGSTPSTDHSTP 270
             P SP+++ +    +  F  +  TPS+++  P
Sbjct: 885  CPPSPSSLSIQTESNFAFFRDQETPSSEYGDP 916


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