BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009467
         (1361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268368.1| PREDICTED: ATP synthase mitochondrial F1 com...   368   2e-99
gb|ABK96051.1| unknown [Populus trichocarpa]                          353   6e-95
ref|XP_002300073.1| predicted protein [Populus trichocarpa] gi|2...   352   1e-94
ref|XP_004145687.1| PREDICTED: ATP synthase mitochondrial F1 com...   351   2e-94
ref|XP_002526942.1| ATP synthase mitochondrial F1 complex assemb...   348   2e-93

>ref|XP_002268368.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Vitis vinifera] gi|296081322|emb|CBI17704.3| unnamed
           protein product [Vitis vinifera]
          Length = 328

 Score =  368 bits (945), Expect = 2e-99
 Identities = 185/271 (68%), Positives = 214/271 (78%), Gaps = 6/271 (2%)
 Frame = -2

Query: 979 DNNIFVK------TREKMSVTMPMSFMTGSIVGKRFYKQVTTRESEDGNGWNVMLDYRTL 818
           D++I VK       RE  SVTMPMSFMTGSIVGKRFYKQ +TRE++DGNGW VMLDYRTL
Sbjct: 57  DDSIHVKGPSSNPRRETTSVTMPMSFMTGSIVGKRFYKQASTREADDGNGWTVMLDYRTL 116

Query: 817 KTPSKRXXXXXXXXXXXXXXAEWEYQESDGIRPFMMPLMRLSCTALERVPLTRLKIVEHL 638
           KTPSKR              AEWEYQ++DGIRPF MPLM+L+CTALERVPLTR+KI+E+L
Sbjct: 117 KTPSKRPLKLPTLSLAKAIAAEWEYQQTDGIRPFTMPLMKLACTALERVPLTRMKIIEYL 176

Query: 637 MKKFHQDLVFCRAPGDNVLTKGVFEKQVEKIDPILNWVESEFGFKPVVYSTFFGGKQEDG 458
           MKKFHQDLVFCRAPGD+ LT GV E+QVEKIDP+L WVES+FGFKP+VYS+FFGGKQEDG
Sbjct: 177 MKKFHQDLVFCRAPGDSDLTIGVLERQVEKIDPLLQWVESQFGFKPIVYSSFFGGKQEDG 236

Query: 457 LVHAIESFLKNTNDCELXXXXXXXXXAHSLVISVGMFRGKXXXXXXXXXXXXXEDLQVDR 278
           LV+AIE+ LK T+DCEL         AHSL I++G+FRGK             EDLQVD+
Sbjct: 237 LVNAIENLLKKTDDCELAAIDAIASAAHSLTIAIGIFRGKLQIEEAIELIRLEEDLQVDK 296

Query: 277 WGLVEGGHDLDIADLKVQISSAAVFLGLSQK 185
           WGLVEGGHD+D+ADLKVQISSAA FLGLS++
Sbjct: 297 WGLVEGGHDVDVADLKVQISSAAAFLGLSRR 327


>gb|ABK96051.1| unknown [Populus trichocarpa]
          Length = 330

 Score =  353 bits (906), Expect = 6e-95
 Identities = 177/276 (64%), Positives = 211/276 (76%), Gaps = 10/276 (3%)
 Frame = -2

Query: 982 DDNNIFVKT----------REKMSVTMPMSFMTGSIVGKRFYKQVTTRESEDGNGWNVML 833
           +D+NI+++           ++  SVTMPMS MTGSIVGKRFYKQVTTRE++DGNGWNVML
Sbjct: 55  NDSNIYMRKGPPNCNVKGEKDSSSVTMPMSSMTGSIVGKRFYKQVTTREADDGNGWNVML 114

Query: 832 DYRTLKTPSKRXXXXXXXXXXXXXXAEWEYQESDGIRPFMMPLMRLSCTALERVPLTRLK 653
           DYRTLKTPSKR              AEW+YQ++DGIRPF MPLM+L+CTAL+RVPLTR K
Sbjct: 115 DYRTLKTPSKRPLKLPTLALAKAIAAEWDYQQTDGIRPFTMPLMKLACTALDRVPLTRPK 174

Query: 652 IVEHLMKKFHQDLVFCRAPGDNVLTKGVFEKQVEKIDPILNWVESEFGFKPVVYSTFFGG 473
           I+EHLMKKF QDLVFCRAP DNVLT GV+E+QVEK DP++ W++SEFGFKPVV+S  FGG
Sbjct: 175 IIEHLMKKFSQDLVFCRAPEDNVLTSGVYERQVEKFDPLIGWIKSEFGFKPVVHSCLFGG 234

Query: 472 KQEDGLVHAIESFLKNTNDCELXXXXXXXXXAHSLVISVGMFRGKXXXXXXXXXXXXXED 293
           KQE+GLV AIE+ LK T+DC+L         AHSL+I+VG+ +GK             ED
Sbjct: 235 KQEEGLVKAIENLLKQTDDCQLAVIDAIASAAHSLIIAVGIVKGKLDIEEAIELIRLEED 294

Query: 292 LQVDRWGLVEGGHDLDIADLKVQISSAAVFLGLSQK 185
            QVD WGLVEGGHD+DIADL+VQISSAAVFLGLS+K
Sbjct: 295 FQVDTWGLVEGGHDIDIADLRVQISSAAVFLGLSRK 330


>ref|XP_002300073.1| predicted protein [Populus trichocarpa] gi|222847331|gb|EEE84878.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  352 bits (904), Expect = 1e-94
 Identities = 174/257 (67%), Positives = 203/257 (78%)
 Frame = -2

Query: 955 REKMSVTMPMSFMTGSIVGKRFYKQVTTRESEDGNGWNVMLDYRTLKTPSKRXXXXXXXX 776
           ++  SVTMPMS MTGSIVGKRFYKQVTTRE++DGNGWNVMLDYRTLKTPSKR        
Sbjct: 14  KDSSSVTMPMSSMTGSIVGKRFYKQVTTREADDGNGWNVMLDYRTLKTPSKRPLKLPTLA 73

Query: 775 XXXXXXAEWEYQESDGIRPFMMPLMRLSCTALERVPLTRLKIVEHLMKKFHQDLVFCRAP 596
                 AEW+YQ++DGIRPF MPLM+L+CTAL+RVPLTR KI+EHLMKKF QDLVFCRAP
Sbjct: 74  LAKAIAAEWDYQQTDGIRPFTMPLMKLACTALDRVPLTRPKIIEHLMKKFSQDLVFCRAP 133

Query: 595 GDNVLTKGVFEKQVEKIDPILNWVESEFGFKPVVYSTFFGGKQEDGLVHAIESFLKNTND 416
            DNVLT GV+E+QVEK DP++ W++SEFGFKPVV+S  FGGKQE+GLV AIE+ LK T+D
Sbjct: 134 EDNVLTSGVYERQVEKFDPLIGWIKSEFGFKPVVHSCLFGGKQEEGLVKAIENLLKQTDD 193

Query: 415 CELXXXXXXXXXAHSLVISVGMFRGKXXXXXXXXXXXXXEDLQVDRWGLVEGGHDLDIAD 236
           C+L         AHSL+I+VG+ +GK             ED QVD WGLVEGGHD+DIAD
Sbjct: 194 CQLAVIDAIASAAHSLIIAVGIVKGKLDIEEAIELIRLEEDFQVDTWGLVEGGHDIDIAD 253

Query: 235 LKVQISSAAVFLGLSQK 185
           L+VQISSAAVFLGLS+K
Sbjct: 254 LRVQISSAAVFLGLSRK 270


>ref|XP_004145687.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Cucumis sativus]
           gi|449492905|ref|XP_004159136.1| PREDICTED: ATP synthase
           mitochondrial F1 complex assembly factor 2-like [Cucumis
           sativus]
          Length = 330

 Score =  351 bits (901), Expect = 2e-94
 Identities = 176/272 (64%), Positives = 207/272 (76%), Gaps = 7/272 (2%)
 Frame = -2

Query: 979 DNNIFVK-------TREKMSVTMPMSFMTGSIVGKRFYKQVTTRESEDGNGWNVMLDYRT 821
           D  +FVK       +R   SVTMP SFMTGSIVGKRFY++VTTRE++D NGW VMLDYRT
Sbjct: 58  DEPVFVKAPRSNSSSRSSSSVTMPTSFMTGSIVGKRFYQKVTTREADDRNGWAVMLDYRT 117

Query: 820 LKTPSKRXXXXXXXXXXXXXXAEWEYQESDGIRPFMMPLMRLSCTALERVPLTRLKIVEH 641
           LKTP+KR              AEWEYQE+DGIRPF MPLM+L+CTALERVPLTR  I+EH
Sbjct: 118 LKTPTKRPLKLPTLGLAKAVAAEWEYQETDGIRPFTMPLMKLACTALERVPLTRHTIIEH 177

Query: 640 LMKKFHQDLVFCRAPGDNVLTKGVFEKQVEKIDPILNWVESEFGFKPVVYSTFFGGKQED 461
           L+KKF+ DLVFCRAP +NVLT GV+E+QVEKIDP+L+WV SEFGFKP+VYS+FFGG QED
Sbjct: 178 LIKKFNSDLVFCRAPEENVLTSGVYERQVEKIDPLLDWVHSEFGFKPIVYSSFFGGNQED 237

Query: 460 GLVHAIESFLKNTNDCELXXXXXXXXXAHSLVISVGMFRGKXXXXXXXXXXXXXEDLQVD 281
           GL+ A+E  LK TNDCEL         AHSL+I++G+FRGK             EDLQVD
Sbjct: 238 GLIKAVEDLLKKTNDCELASIDAIASAAHSLIIAIGIFRGKLQIEEAIELIRLEEDLQVD 297

Query: 280 RWGLVEGGHDLDIADLKVQISSAAVFLGLSQK 185
           +WGLVEGGHD+DIADL+VQISSA VFL LS++
Sbjct: 298 KWGLVEGGHDVDIADLQVQISSATVFLALSRR 329


>ref|XP_002526942.1| ATP synthase mitochondrial F1 complex assembly factor 2,
           mitochondrial precursor, putative [Ricinus communis]
           gi|223533694|gb|EEF35429.1| ATP synthase mitochondrial
           F1 complex assembly factor 2, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 334

 Score =  348 bits (893), Expect = 2e-93
 Identities = 176/252 (69%), Positives = 204/252 (80%)
 Frame = -2

Query: 943 SVTMPMSFMTGSIVGKRFYKQVTTRESEDGNGWNVMLDYRTLKTPSKRXXXXXXXXXXXX 764
           SVTMPMSFMTGSIVGKRFYK+VTTRE++DG G+ VMLDYRTLKTPSK+            
Sbjct: 82  SVTMPMSFMTGSIVGKRFYKKVTTREADDGIGYTVMLDYRTLKTPSKKPLKLPTLSLAKA 141

Query: 763 XXAEWEYQESDGIRPFMMPLMRLSCTALERVPLTRLKIVEHLMKKFHQDLVFCRAPGDNV 584
             AEW+ Q++DGIRPF MPLM+L+CTALERVPLTRLKI+E+LMKKF+QDLVFCRAP DN 
Sbjct: 142 IAAEWDCQQTDGIRPFTMPLMKLACTALERVPLTRLKIIENLMKKFNQDLVFCRAPEDND 201

Query: 583 LTKGVFEKQVEKIDPILNWVESEFGFKPVVYSTFFGGKQEDGLVHAIESFLKNTNDCELX 404
           LT GV+E+QVEKIDP+L+WV+SEFGFKPVVYS+FFGGKQE+GLV AIE  LK T++CEL 
Sbjct: 202 LTSGVYERQVEKIDPLLDWVKSEFGFKPVVYSSFFGGKQEEGLVKAIEDLLKKTDNCELA 261

Query: 403 XXXXXXXXAHSLVISVGMFRGKXXXXXXXXXXXXXEDLQVDRWGLVEGGHDLDIADLKVQ 224
                   AHSLVI++G+ RGK             EDLQVDRWGLVEGGHD+DIADL+VQ
Sbjct: 262 AIDAIAASAHSLVIAIGIVRGKLDIEEAIQLIRLEEDLQVDRWGLVEGGHDIDIADLRVQ 321

Query: 223 ISSAAVFLGLSQ 188
           ISSAAVFLGLS+
Sbjct: 322 ISSAAVFLGLSR 333