BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009452
         (1649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-l...   525   e-146
emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]   518   e-144
ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-l...   483   e-134
ref|XP_002531128.1| exosome complex exonuclease rrp45, putative ...   480   e-133
ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-l...   475   e-131

>ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-like [Vitis vinifera]
          Length = 467

 Score =  525 bits (1353), Expect = e-146
 Identities = 279/451 (61%), Positives = 331/451 (73%), Gaps = 11/451 (2%)
 Frame = +1

Query: 115  MEQRLANTWRMTVNEKKFIETALLVDLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 294
            MEQRLA+T+RMTVNEKKFIE ALL DLR+DGR+P+D+RR++IKFG+EDGSSEVQLGQTHV
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGREDGSSEVQLGQTHV 60

Query: 295  MGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 474
            MGFV+ QL+QPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGE+AVEL R+IDRGLRESRA
Sbjct: 61   MGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVIDRGLRESRA 120

Query: 475  VDTESLCVLAGKQVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 654
            VD ESLCVLAGK VWSIR+DLH+ID                 +TFRRPEC+ GGEDGQE+
Sbjct: 121  VDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECSFGGEDGQEL 180

Query: 655  IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 834
            IVHPPEV+EPLPLI+HHLPIAVTFA +G+ NIMVIDP+HSEEAVMGGRMTATLN NG++C
Sbjct: 181  IVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTATLNTNGDVC 240

Query: 835  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDAVEVYSTERAQRKIKRHXXXXXXXX 1014
            AIQKAGGEG++QS+IMQCLRIASVKAADITSKIK+AVE ++TERA RKIKRH        
Sbjct: 241  AIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKRHSSSIAVDV 300

Query: 1015 XXXXIRMKQ-QNQSTSHKVVGELS-----KLQMDEPEXXXXXXXXXXXXXXXXXXXXXXG 1176
                 +M++ +NQS   KVV ELS     +L+M+  E                       
Sbjct: 301  SGPGAKMRENKNQSVDEKVVNELSSHHMERLKMESEESCVTQSSDVEVKTQLSEQGRTNR 360

Query: 1177 RSDSVKKLGGAPSSWDPYTSCIDYDSLKTSVASPERI--TPKREDDQGPM---EVTLEEP 1341
              ++ +   G PSSWDPY+  ID D LK S+AS   I    K++D +G M   +V  EEP
Sbjct: 361  SDENTRSFIGGPSSWDPYSKGIDSDFLKASLASHGLIKQNTKQKDSRGEMKAPDVKSEEP 420

Query: 1342 VIDLPTTKSTPVAAEDSGQQTSIAMTLQDAV 1434
              D+      P+    +  QT+   TL+DAV
Sbjct: 421  NADIDPA-LCPMKTVGTTPQTNGEKTLKDAV 450


>emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]
          Length = 476

 Score =  518 bits (1333), Expect = e-144
 Identities = 279/460 (60%), Positives = 331/460 (71%), Gaps = 20/460 (4%)
 Frame = +1

Query: 115  MEQRLANTWRMTVNEKKFIETALLVDLRVDGRKPYDYRRLTIKFGK---------EDGSS 267
            MEQRLA+T+RMTVNEKKFIE ALL DLR+DGR+P+D+RR++IKFG+         EDGSS
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGRQVFIRTICAEDGSS 60

Query: 268  EVQLGQTHVMGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARII 447
            EVQLGQTHVMGFV+ QL+QPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGE+AVEL R+I
Sbjct: 61   EVQLGQTHVMGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVI 120

Query: 448  DRGLRESRAVDTESLCVLAGKQVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECT 627
            DRGLRESRAVD ESLCVLAGK VWSIR+DLH+ID                 +TFRRPEC+
Sbjct: 121  DRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECS 180

Query: 628  LGGEDGQEVIVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTA 807
             GGEDGQE+IVHPPEV+EPLPLI+HHLPIAVTFA +G+ NIMVIDP+HSEEAVMGGRMTA
Sbjct: 181  FGGEDGQELIVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTA 240

Query: 808  TLNMNGEICAIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDAVEVYSTERAQRKIKR 987
            TLN NG++CAIQKAGGEG++QS+IMQCLRIASVKAADITSKIK+AVE ++TERA RKIKR
Sbjct: 241  TLNTNGDVCAIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKR 300

Query: 988  HXXXXXXXXXXXXIRMKQ-QNQSTSHKVVGELS-----KLQMDEPEXXXXXXXXXXXXXX 1149
            H             +M++ +NQS   KVV ELS     +L+M+  E              
Sbjct: 301  HSSSIAVDVSGPGAKMRENKNQSVDEKVVNELSSHHMERLKMESEESCVTQSSDVEVKTQ 360

Query: 1150 XXXXXXXXGRSDSVKKLGGAPSSWDPYTSCIDYDSLKTSVASPERI--TPKREDDQGPM- 1320
                       ++ +   G PSSWDPY+  ID D LK S+AS   I    K++D +G M 
Sbjct: 361  LSEQGRTNRSDENTRSFIGGPSSWDPYSKGIDSDFLKASLASHGLIKQNTKQKDSRGEMK 420

Query: 1321 --EVTLEEPVIDLPTTKSTPVAAEDSGQQTSIAMTLQDAV 1434
              +V  EEP  D+      P+    +  QT+   TL+DAV
Sbjct: 421  APDVKSEEPNADIDPA-LCPMKTVGTTPQTNGEKTLKDAV 459


>ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 452

 Score =  483 bits (1242), Expect = e-134
 Identities = 258/445 (57%), Positives = 303/445 (68%), Gaps = 5/445 (1%)
 Frame = +1

Query: 115  MEQRLANTWRMTVNEKKFIETALLVDLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 294
            MEQRLANTWR++ NEKKFIETALL DLRVDGR P+DYR LTI FGK+DGSSEVQLGQTHV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 295  MGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 474
            MGFV++QLVQPYRDRPNEGTLSIYTEFSPMADPSFE GRPGESAVEL R+IDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 475  VDTESLCVLAGKQVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 654
            VDTESLCV++GK VW+IRVDLH++D                  TFRRPEC+L G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 655  IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 834
            IVHPPEV+EPLPLIIHHLPIAVTFAF    +I+VIDP+H EEAVMGGRMT TLN N ++C
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 835  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDAVEVYSTERAQRKIKRHXXXXXXXX 1014
            AIQKAGGEGV++S+IMQCLRIASVKA DIT+KIK+AVE YS+ R  RKIKRH        
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPSVNLDVG 300

Query: 1015 XXXXIRMKQQNQSTSHKVVGELSKLQMDEPEXXXXXXXXXXXXXXXXXXXXXXGRSDSVK 1194
                     Q  S   K + +   +                             R    K
Sbjct: 301  GGTGSLKDSQGISDGQKSINDQESVVSQSGSIKNDASTNQGQLDK---------RDSDAK 351

Query: 1195 KLGGAPSSWDPYTSCIDYDSLKTSVASPERITPKREDDQGPMEVTLEEPVIDLPTTK--- 1365
               G PS WDP++   D D LK ++AS   +T  +++D    E+   E ++D    K   
Sbjct: 352  NFIGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSD-EMMSSESMVDEQEAKVDE 410

Query: 1366 --STPVAAEDSGQQTSIAMTLQDAV 1434
               +PVAA+   ++     TL+DAV
Sbjct: 411  VNLSPVAAKTLSEENG-KKTLKDAV 434


>ref|XP_002531128.1| exosome complex exonuclease rrp45, putative [Ricinus communis]
            gi|223529292|gb|EEF31262.1| exosome complex exonuclease
            rrp45, putative [Ricinus communis]
          Length = 463

 Score =  480 bits (1235), Expect = e-133
 Identities = 257/448 (57%), Positives = 305/448 (68%), Gaps = 8/448 (1%)
 Frame = +1

Query: 115  MEQRLANTWRMTVNEKKFIETALLVDLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 294
            ME R+A+TWRM+VNEKKFIE+AL  DLR+DGR  +++R+LTIKFG+EDGSSEVQLGQTHV
Sbjct: 1    MEGRVASTWRMSVNEKKFIESALDSDLRIDGRNSHEFRKLTIKFGREDGSSEVQLGQTHV 60

Query: 295  MGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 474
            MGFV+SQLVQPYRDRPNEG+LSI++EFSPMADPSFE GRPGESAVEL RIIDRGLRESRA
Sbjct: 61   MGFVTSQLVQPYRDRPNEGSLSIFSEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 475  VDTESLCVLAGKQVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 654
            VDTESLCVLAGK VW+IR+DLH++D                 +TFRRPECTLGGEDGQ+V
Sbjct: 121  VDTESLCVLAGKLVWAIRIDLHILDNGGNLVDAANIAALAALLTFRRPECTLGGEDGQQV 180

Query: 655  IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 834
            IVHPPEVKEPLPLI+HHLPIAVTFAF    + MV+DP+H+EEAVM GRMT T+N NG+IC
Sbjct: 181  IVHPPEVKEPLPLIVHHLPIAVTFAFFSSEHTMVVDPTHNEEAVMTGRMTVTVNANGDIC 240

Query: 835  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDAVEVYSTERAQRKIKRHXXXXXXXX 1014
            +IQKAGGEGVMQS IM CLR+AS  A  IT KIKDAVE Y+TERA RKIKRH        
Sbjct: 241  SIQKAGGEGVMQSRIMHCLRVASRNAESITKKIKDAVEAYNTERALRKIKRHSTSVAVNV 300

Query: 1015 XXXXIRMKQQNQSTSHKVVGELSKLQMD-----EPEXXXXXXXXXXXXXXXXXXXXXXGR 1179
                   + +N+    K + E+S+ QM+       E                       R
Sbjct: 301  STAIDVRELENKPFIQKGISEISRHQMERLKLTSEESSVSQSNGIDSGLRSSEQGGTSNR 360

Query: 1180 SDSVKKLGGAPSSWDPYTSCIDYDSLKTSVASPERITPKRE---DDQGPMEVTLEEPVID 1350
              +     G PS WDPY+  +D D LK S+AS     P +E   + +    V  + P   
Sbjct: 361  EGNATNFLGGPSRWDPYSKGVDSDFLKASLASHGVSAPNKEKGGEQKSTQAVDEKAPETA 420

Query: 1351 LPTTKSTPVAAEDSGQQTSIAMTLQDAV 1434
             P T        ++G QTS   TL+DAV
Sbjct: 421  KPATSVGETF--ETGIQTSGEKTLKDAV 446


>ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 454

 Score =  475 bits (1223), Expect = e-131
 Identities = 258/447 (57%), Positives = 302/447 (67%), Gaps = 7/447 (1%)
 Frame = +1

Query: 115  MEQRLANTWRMTVNEKKFIETALLVDLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 294
            MEQRLANTWR++ NEKKFIETALL DLRVDGR P+DYR LTI FGK+DGSSEVQLGQTHV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 295  MGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 474
            MGFV++QLVQPYRDRPNEGTLSIYTEFSPMADPSFE GRPGESAVEL R+IDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 475  VDTESLCVLAGKQVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 654
            VDTESLCV++GK VW+IRVDLH++D                  TFRRPEC+L G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 655  IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 834
            IVHPPEV+EPLPLIIHHLPIAVTFAF    +I+VIDP+H EEAVMGGRMT TLN N ++C
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 835  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIK--DAVEVYSTERAQRKIKRHXXXXXX 1008
            AIQKAGGEGV++S+IMQCLRIASVKA DIT+KIK   AVE YS+ R  RKIKRH      
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKMQAAVETYSSARQLRKIKRHPSVNLD 300

Query: 1009 XXXXXXIRMKQQNQSTSHKVVGELSKLQMDEPEXXXXXXXXXXXXXXXXXXXXXXGRSDS 1188
                       Q  S   K + +   +                             R   
Sbjct: 301  VGGGTGSLKDSQGISDGQKSINDQESVVSQSGSIKNDASTNQGQLDK---------RDVD 351

Query: 1189 VKKLGGAPSSWDPYTSCIDYDSLKTSVASPERITPKREDDQGPMEVTLEEPVIDLPTTK- 1365
             K   G PS WDP++   D D LK ++AS   +T  +++D    E+   E ++D    K 
Sbjct: 352  AKNFIGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSD-EMMSSESMVDEQEAKV 410

Query: 1366 ----STPVAAEDSGQQTSIAMTLQDAV 1434
                 +PVAA+   ++     TL+DAV
Sbjct: 411  DEVNLSPVAAKTLSEENG-KKTLKDAV 436