BLASTX nr result

ID: Coptis24_contig00009443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009443
         (2744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE68427.1| hypothetical protein OsJ_26794 [Oryza sativa Japo...    78   3e-30
ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780...    79   4e-24
ref|XP_002450438.1| hypothetical protein SORBIDRAFT_05g005485 [S...    87   4e-24
ref|XP_001776183.1| predicted protein [Physcomitrella patens sub...    80   1e-21
ref|XP_002460138.1| hypothetical protein SORBIDRAFT_02g023240 [S...   108   1e-20

>gb|EEE68427.1| hypothetical protein OsJ_26794 [Oryza sativa Japonica Group]
          Length = 368

 Score = 78.2 bits (191), Expect(3) = 3e-30
 Identities = 39/64 (60%), Positives = 50/64 (78%)
 Frame = -3

Query: 1089 SSYKALSYEKARTSLSNECKRNVENDMANVKATWFSHGVSIVSDGWTNVKHVKYPLINII 910
            S YK  S EKART+L + CKR+VE+D+A VK+TW + GVSIVSDGWT++K+   PLIN+I
Sbjct: 203  SGYKGPSSEKARTTLLDACKRSVEHDLAIVKSTWCTQGVSIVSDGWTDIKN--KPLINVI 260

Query: 909  VVNS 898
              NS
Sbjct: 261  ASNS 264



 Score = 61.2 bits (147), Expect(3) = 3e-30
 Identities = 29/50 (58%), Positives = 36/50 (72%)
 Frame = -1

Query: 1238 GSPLENAFAKMDIDQVDLMILR*LCANGIPFIVLRSPQFHEMVTAINKGP 1089
            G+PL + F +      D+ I++ LCANGIPF +LRSPQF EMVTAINK P
Sbjct: 153  GNPLADCFGEGKRHDADMKIVKFLCANGIPFNILRSPQFAEMVTAINKAP 202



 Score = 42.0 bits (97), Expect(3) = 3e-30
 Identities = 19/41 (46%), Positives = 27/41 (65%)
 Frame = -2

Query: 1423 IHYHFLGCPPGKNAEIARCTVLLTNRAEYERVQQKVYEAEK 1301
            I  H LG PPGK AE+ARC  LL +  + + ++ KV +AE+
Sbjct: 100  IRIHLLGPPPGKKAEVARCVALLKDPIKCKALRDKVKKAEQ 140


>ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780312 [Glycine max]
          Length = 557

 Score = 79.0 bits (193), Expect(2) = 4e-24
 Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
 Frame = -2

Query: 838 IGRYLLKSIEEVGPPNLLQVVTDKAASCKLACKEVVKVHKHIFWLPCVVQTLNLMFKDLA 659
           I +++ + I EVG  N++Q+VTD AA CK A   +      I+W PCVV TLNL  K++ 
Sbjct: 112 IAKHMREVIMEVGHSNVVQIVTDNAAVCKAAGLIIEAEFPSIYWTPCVVHTLNLALKNIC 171

Query: 658 ------------EQICWFTNTSKRGKLIVKYFVNHTHALAMFRTQSILELLKVAKTRFTS 515
                       E+  W T  +     +  + ++H+  L++F + + L+LL +A TRF S
Sbjct: 172 AAKNTEKNNVAYEECSWITQIADDAMFVKNFVMSHSMRLSIFNSFNSLKLLSIAPTRFAS 231

Query: 514 HNILLKK 494
             ++LK+
Sbjct: 232 TIVMLKR 238



 Score = 61.6 bits (148), Expect(2) = 4e-24
 Identities = 34/79 (43%), Positives = 46/79 (58%)
 Frame = -3

Query: 1110 YSYKQGTSSYKALSYEKARTSLSNECKRNVENDMANVKATWFSHGVSIVSDGWTNVKHVK 931
            Y+     S Y+   Y K RT+L    +R+VEN +  +K  W   GVSIVSDGW++ +  +
Sbjct: 23   YAANNQISGYQPPGYNKLRTTLLQNERRHVENLLQPIKNAWSQKGVSIVSDGWSDPQ--R 80

Query: 930  YPLINIIVVNSSGAMFLYA 874
              LIN +VV  SG MFL A
Sbjct: 81   RSLINFMVVTESGPMFLKA 99


>ref|XP_002450438.1| hypothetical protein SORBIDRAFT_05g005485 [Sorghum bicolor]
            gi|241936281|gb|EES09426.1| hypothetical protein
            SORBIDRAFT_05g005485 [Sorghum bicolor]
          Length = 313

 Score = 86.7 bits (213), Expect(2) = 4e-24
 Identities = 42/95 (44%), Positives = 62/95 (65%)
 Frame = -3

Query: 1083 YKALSYEKARTSLSNECKRNVENDMANVKATWFSHGVSIVSDGWTNVKHVKYPLINIIVV 904
            YK    EKART+L +  KRNVEND++ V+ TW + GVS+VSDGWTN+K    PL+N++  
Sbjct: 197  YKGPGSEKARTTLLDALKRNVENDLSTVRDTWLTQGVSVVSDGWTNIK--GQPLLNVLAS 254

Query: 903  NSSGAMFLYADVLRG*KKQDQLLEDTC*SQLKRLG 799
            NS G+ FLYA+   G +K  + + +     ++ +G
Sbjct: 255  NSVGSCFLYAEDFSGIEKTGEAIAEFLLKAIEEIG 289



 Score = 53.9 bits (128), Expect(2) = 4e-24
 Identities = 31/72 (43%), Positives = 41/72 (56%)
 Frame = -1

Query: 1301 KTKVSS*LKSFTLTKPQQLLWGSPLENAFAKMDIDQVDLMILR*LCANGIPFIVLRSPQF 1122
            + KV    KS    + +  L  + L  AF   + D VDL I++ + ANGI F VLRSP +
Sbjct: 124  RDKVKEAEKSSKSVQQKGRLLNNSLAQAFGAAERDAVDLKIMQFIAANGISFNVLRSPHY 183

Query: 1121 HEMVTAINKGPQ 1086
             EMVTAIN  P+
Sbjct: 184  SEMVTAINNAPK 195



 Score = 62.0 bits (149), Expect = 8e-07
 Identities = 27/47 (57%), Positives = 37/47 (78%)
 Frame = -2

Query: 868 FKGLEKTGPVIGRYLLKSIEEVGPPNLLQVVTDKAASCKLACKEVVK 728
           F G+EKTG  I  +LLK+IEE+GP N++QVVTD A++CK A +E+ K
Sbjct: 267 FSGIEKTGEAIAEFLLKAIEEIGPKNVVQVVTDNASNCKAAGREIQK 313


>ref|XP_001776183.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162672416|gb|EDQ58953.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 201

 Score = 79.7 bits (195), Expect(2) = 1e-21
 Identities = 40/124 (32%), Positives = 74/124 (59%)
 Frame = -2

Query: 862 GLEKTGPVIGRYLLKSIEEVGPPNLLQVVTDKAASCKLACKEVVKVHKHIFWLPCVVQTL 683
           G + +G  I  ++  +IE VG  N++QV+TD  ++C+   K+++  + HI W+PC    L
Sbjct: 78  GQQLSGSYIYGHIKNAIEYVGANNIVQVITDNQSNCRSMDKQLISDYPHIQWIPCAAHCL 137

Query: 682 NLMFKDLAEQICWFTNTSKRGKLIVKYFVNHTHALAMFRTQSILELLKVAKTRFTSHNIL 503
           +L+ +D+A  + W  +  K+ K IVK+    +  L++FR+ S LE+L+ +  RF    + 
Sbjct: 138 DLIVEDIA-GLSWMKDFIKKAKTIVKFATRRSKVLSIFRSFSNLEILQFSAARFGYMFLF 196

Query: 502 LKKL 491
           L++L
Sbjct: 197 LQQL 200



 Score = 52.4 bits (124), Expect(2) = 1e-21
 Identities = 27/66 (40%), Positives = 43/66 (65%)
 Frame = -3

Query: 1071 SYEKARTSLSNECKRNVENDMANVKATWFSHGVSIVSDGWTNVKHVKYPLINIIVVNSSG 892
            S E  RTS  NE  ++V + +  +K++W  +G SI +DGWT++K  + P+INI+V +  G
Sbjct: 7    SCESLRTSHLNEEFQSVIHSLGPIKSSWRRYGCSIFADGWTDIK--RRPIINILVSSCQG 64

Query: 891  AMFLYA 874
             +FL A
Sbjct: 65   TIFLDA 70


>ref|XP_002460138.1| hypothetical protein SORBIDRAFT_02g023240 [Sorghum bicolor]
           gi|241923515|gb|EER96659.1| hypothetical protein
           SORBIDRAFT_02g023240 [Sorghum bicolor]
          Length = 338

 Score =  108 bits (269), Expect = 1e-20
 Identities = 51/83 (61%), Positives = 61/83 (73%)
 Frame = -2

Query: 727 VHKHIFWLPCVVQTLNLMFKDLAEQICWFTNTSKRGKLIVKYFVNHTHALAMFRTQSILE 548
           VH+HIFW PCVV TLNL+FKD A +  W  +T K GK IV +F +H H LAMFR  S L+
Sbjct: 155 VHEHIFWSPCVVHTLNLIFKDFASKFPWMEDTYKAGKAIVNFFQSHCHCLAMFRNNSRLD 214

Query: 547 LLKVAKTRFTSHNILLKKLTDCR 479
           LLKVAKTRF SH+ILL++L   R
Sbjct: 215 LLKVAKTRFASHHILLERLRTVR 237


Top