BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009437
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    72   3e-10
gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indi...    59   2e-06
ref|XP_002865522.1| hypothetical protein ARALYDRAFT_917523 [Arab...    58   5e-06

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 99/446 (22%), Positives = 181/446 (40%), Gaps = 26/446 (5%)
 Frame = +2

Query: 23   SYFWKGVKNSLEAVWEGLVWSLGNGSSISTFTEPWMI---LNNKPATLSDHVK----ADL 181
            SY W+ +  +   V EG  WS+G+G+ I  + + W++   +  KP +L +  K    ADL
Sbjct: 1307 SYVWRNIWGAKRVVSEGYKWSIGSGTDICVWDQRWLVDGGVLQKPESLPEEFKELTVADL 1366

Query: 182  SFSAVD--KSGYVKELVAEDNTNWNQERLGELFPTPI------KKHINLMSVRPDTQDRI 337
              S       G ++ LV+ ++TN        +  TPI       +H++L + R D  + +
Sbjct: 1367 FISQTRFWNVGLLRNLVSNEDTN-------RILNTPIFEPNHLSQHVDLSTHRCD-GNWV 1418

Query: 338  IRWRV---*NLMLVLNYSCGNCIYIWEA*PLGCHVEKTIQRKCELC-FCWKEIETDYHVF 505
            + W +     +   L  SC N +      P    ++       + C  C  E E   H+F
Sbjct: 1419 LLWNLKVPPKVKTFLWRSCRNAL------PTRVRLQDRGVNCTKTCALCENEDEDSMHLF 1472

Query: 506  FGCEWSRRLWMGSILGQRMMQNDDKDARFALDSFLNWGIQKQDFEGKYAKIYAICLLSAI 685
            F C  SR+ W    L  ++ Q    +  F +  F       Q+ +     I+A C++ +I
Sbjct: 1473 FYCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMF----EILQELDSSQRVIWA-CVMWSI 1527

Query: 686  WVCRNKFKFEGQEI---RVQDIYKNVYTHTEQVTEAYKKETDTPRKTATLDTMVESTRTE 856
            W  RN   +  + +    V+D   N+ T  +   + ++K                     
Sbjct: 1528 WKQRNDCIWRNEVMTTAAVRDRGLNLLTGWQNAQDIWRK--------------------- 1566

Query: 857  QMKHENWHRIYGDGAYEKDT*RGAAAIC-KGQDGRLIGAVYS-KFKCQNAMQAECRGVEL 1030
                E   +   D A+ K++ R    IC +   GRL+ A  S      +  + E  G+  
Sbjct: 1567 --PDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLY 1624

Query: 1031 AIILAQKLQIKNMVILGDNQRLVKTLAAGESTLVWDSEEDYNRIKNTMREYNENYPSVIV 1210
            AI  A++  + N+    D++R+V +          ++  D + +   +RE    + S   
Sbjct: 1625 AIRWAKEQNLNNITFELDSKRVVYSF--------HNTRNDVSDLGAIIRECRTTFSSFFT 1676

Query: 1211 --KFFWLNRNSNRDVNQLAKWANKYA 1282
              +  ++ R +N  V+ LA+ A  YA
Sbjct: 1677 NSRVEFIRRQANEVVHSLARAATFYA 1702


>gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indica Group]
          Length = 858

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 86/437 (19%), Positives = 171/437 (39%), Gaps = 27/437 (6%)
 Frame = +2

Query: 32   WKGVKNSLEAVWEGLVWSLGNGSSISTFTEPWMILNNKPATLSDHVKADLSFSAVDKSGY 211
            WKG+++ LE + +G++W +GNG SI  + +PW+  N     +S      L         +
Sbjct: 429  WKGIEHGLELLKKGIIWRVGNGHSIRIWRDPWIPRNFSRKAISGKGSCRLR--------W 480

Query: 212  VKELVAEDNTNWNQERLGELF-PTPIKKHINLMSVRPDTQDRIIRWRV*NLMLVLNYSCG 388
            V +L+  D   W++ R+   F P   +  + + + R   +D  + W           S  
Sbjct: 481  VSDLLDSDGL-WDEHRVRHFFLPIDAEVILGIRTSRGRDED-FVAWHPDKF-----GSFS 533

Query: 389  NCIYIWEA*PLGCHV-----EKTIQRKCELCFCWKEIETDYHVFFGCEWSRRLWMGSILG 553
              I+ W+A      +     ++ +++      C  E E   H    C  ++ LW+     
Sbjct: 534  VKIFAWKAITNSLAIMLNKKKRNLEQSSTCTICGIEEEDVAHALCRCPQAKFLWLA---- 589

Query: 554  QRMMQNDDKDARFALD---SFLNWGIQKQDFEGKYAKIYAICLLSAIWVCRNKFKFEGQE 724
                  +  D  F  D   +  +W + + +   +  ++  + LL   W  RN+       
Sbjct: 590  ----LRNSNDIGFVPDGRWTGSDWILNQLEILVEPDRVMFLLLLWRAWHIRNEVVHGKHA 645

Query: 725  IRVQDIYKNVYT-HTEQVTEAYKKETDTPRKTATLDTMVESTRTEQMKHE---------- 871
              ++  ++ + + HT  +      + D  +    +  MV  +   Q + E          
Sbjct: 646  PPIEASHRFIVSYHTSLLEIKQFPKADLTKGKHVIGQMVGHSGRHQRQPETLPYTWKKPD 705

Query: 872  -NWHRIYGDGAY-EKDT*RGAAAICKGQDGRLI-GAVYSKFKCQNAMQAECRGVELAIIL 1042
              W ++  DG++ E D   G  AI +   G ++  +  S  +C  A++AE       + L
Sbjct: 706  TGWMKLNVDGSFQEHDGSGGIGAILRNSAGEVVFASCGSMNRCGGALEAELLACRDGLTL 765

Query: 1043 AQKLQIKNMVILGDNQRLVKTLAAGESTLVWDSEEDYNRIKNTMREYNE----NYPSVIV 1210
              +  +  +VI  D  + ++        L+   EE+ + +   +RE       N   VI+
Sbjct: 766  VLQWTLLPIVIESDCLQAIQ--------LIQSKEEERSDLAFLIREIKHLMAGNRDIVIM 817

Query: 1211 KFFWLNRNSNRDVNQLA 1261
            K   ++RN N   + LA
Sbjct: 818  K---IHRNQNSVSHALA 831


>ref|XP_002865522.1| hypothetical protein ARALYDRAFT_917523 [Arabidopsis lyrata subsp.
            lyrata] gi|297311357|gb|EFH41781.1| hypothetical protein
            ARALYDRAFT_917523 [Arabidopsis lyrata subsp. lyrata]
          Length = 352

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 61/256 (23%), Positives = 99/256 (38%), Gaps = 15/256 (5%)
 Frame = +2

Query: 470  CWKEIETDYHVFFGCEWSRRLWMGSILGQRMMQNDDK----DARFALDSFLNWGIQKQDF 637
            C  E+ET+ H  F C   R +W  + +  + + + DK      RF LD   N  I     
Sbjct: 65   CCNELETNDHTLFSCPSIRPIWRAAGIPTQDLWDRDKPFEGKIRFLLDLHDNKHID---- 120

Query: 638  EGKYAKIYAICLLSAIWVCRNKFKFEGQEIRVQDIYKNVYTHTEQVTEAYKKETDTPRKT 817
              K  +     LL  IW  RN   F  +  + +DI       T++  +  +  T  P+  
Sbjct: 121  --KVCRYLPFWLLWRIWKTRNDLIFNHKVTKGEDIVGQALIDTKEWLDC-QDRTHGPQHD 177

Query: 818  ATLDTMVESTRTEQMKHENWH--RIYGDGAYEKDT*RGAAAICKGQDGRLIGAVYSKFK- 988
              L  +  S  ++  K E  +    +    YE +   G   I +  +G  +     KF+ 
Sbjct: 178  GKLQGVRSSRSSKWCKPERGYVKCNFDASHYEGNQSSGLGRIIRDSNGTCLDCGMGKFQG 237

Query: 989  CQNAMQAECRGVELAIILAQKLQIKNMVILGDNQRLVKTLAAGESTL--------VWDSE 1144
             Q   +AEC  +  AI  +  L  +++   GDN  +V  +  G   L        +W   
Sbjct: 238  RQTIEEAECSALIWAIQASWALGYRHVEFEGDNANIVNLINEGGINLRLKHYMEEIWQWR 297

Query: 1145 EDYNRIKNTMREYNEN 1192
              +N IK T R   +N
Sbjct: 298  NMFNSIKFTFRHREQN 313