BLASTX nr result
ID: Coptis24_contig00009431
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009431 (376 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-21 ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis s... 105 5e-21 ref|XP_002321178.1| predicted protein [Populus trichocarpa] gi|2... 102 4e-20 ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera] 100 1e-19 ref|XP_002533868.1| protein with unknown function [Ricinus commu... 99 5e-19 >ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|222843310|gb|EEE80857.1| predicted protein [Populus trichocarpa] Length = 514 Score = 107 bits (267), Expect = 1e-21 Identities = 51/71 (71%), Positives = 64/71 (90%), Gaps = 1/71 (1%) Frame = +1 Query: 43 VRTLSPAAQKFVRS-MAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKS 219 VRTLSPAAQKFVR+ +++SSS++DETLRASYRGASP GTPK+GRS++RFGRD SS+S Sbjct: 444 VRTLSPAAQKFVRNAISRSSSSVDETLRASYRGASPGVGTPKSGRSISRFGRDGSISSRS 503 Query: 220 PALKEGSNPPW 252 P+++E SNPPW Sbjct: 504 PSVRENSNPPW 514 >ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis sativus] Length = 509 Score = 105 bits (261), Expect = 5e-21 Identities = 52/70 (74%), Positives = 60/70 (85%), Gaps = 1/70 (1%) Frame = +1 Query: 46 RTLSPAAQKFVRS-MAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSP 222 RTLSPAAQKFVR+ +AKSSS+ DETLRASYRG SP A TPK+GRSL+RF RD F S+SP Sbjct: 440 RTLSPAAQKFVRNAIAKSSSSFDETLRASYRGGSPSAATPKSGRSLSRFARDGSFGSRSP 499 Query: 223 ALKEGSNPPW 252 ++KEGSNP W Sbjct: 500 SVKEGSNPAW 509 >ref|XP_002321178.1| predicted protein [Populus trichocarpa] gi|222861951|gb|EEE99493.1| predicted protein [Populus trichocarpa] Length = 471 Score = 102 bits (253), Expect = 4e-20 Identities = 48/70 (68%), Positives = 61/70 (87%), Gaps = 1/70 (1%) Frame = +1 Query: 46 RTLSPAAQKFVR-SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSP 222 RTLSPAAQKFVR ++++S S++DETLRASYRGASP GTPK+GRS++RFGRD S+SP Sbjct: 402 RTLSPAAQKFVRKAISRSLSSVDETLRASYRGASPGVGTPKSGRSISRFGRDGSMGSRSP 461 Query: 223 ALKEGSNPPW 252 +++E SNPPW Sbjct: 462 SVRENSNPPW 471 >ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera] Length = 504 Score = 100 bits (249), Expect = 1e-19 Identities = 49/71 (69%), Positives = 62/71 (87%), Gaps = 1/71 (1%) Frame = +1 Query: 43 VRTLSPAAQKFVRS-MAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKS 219 VRTLS AAQKFVR+ +AKSS ++DE+LRASYRGASP TPK+GRS++RFGRD S++S Sbjct: 434 VRTLSHAAQKFVRNAIAKSSCSVDESLRASYRGASPGISTPKSGRSMSRFGRDGSTSTRS 493 Query: 220 PALKEGSNPPW 252 P+++EGSNPPW Sbjct: 494 PSVREGSNPPW 504 >ref|XP_002533868.1| protein with unknown function [Ricinus communis] gi|223526190|gb|EEF28518.1| protein with unknown function [Ricinus communis] Length = 519 Score = 98.6 bits (244), Expect = 5e-19 Identities = 47/71 (66%), Positives = 62/71 (87%), Gaps = 1/71 (1%) Frame = +1 Query: 43 VRTLSPAAQKFVRS-MAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKS 219 VRTLSPAAQKF+R+ ++KSSS++DE+LRASYRG+SP GTPK+ RS++RFGRD S+S Sbjct: 449 VRTLSPAAQKFMRNAISKSSSSVDESLRASYRGSSPGIGTPKSVRSVSRFGRDGSMGSRS 508 Query: 220 PALKEGSNPPW 252 P+++E SNPPW Sbjct: 509 PSVREDSNPPW 519