BLASTX nr result

ID: Coptis24_contig00009431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009431
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis s...   105   5e-21
ref|XP_002321178.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]        100   1e-19
ref|XP_002533868.1| protein with unknown function [Ricinus commu...    99   5e-19

>ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|222843310|gb|EEE80857.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/71 (71%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
 Frame = +1

Query: 43  VRTLSPAAQKFVRS-MAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKS 219
           VRTLSPAAQKFVR+ +++SSS++DETLRASYRGASP  GTPK+GRS++RFGRD   SS+S
Sbjct: 444 VRTLSPAAQKFVRNAISRSSSSVDETLRASYRGASPGVGTPKSGRSISRFGRDGSISSRS 503

Query: 220 PALKEGSNPPW 252
           P+++E SNPPW
Sbjct: 504 PSVRENSNPPW 514


>ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis sativus]
          Length = 509

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/70 (74%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
 Frame = +1

Query: 46  RTLSPAAQKFVRS-MAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSP 222
           RTLSPAAQKFVR+ +AKSSS+ DETLRASYRG SP A TPK+GRSL+RF RD  F S+SP
Sbjct: 440 RTLSPAAQKFVRNAIAKSSSSFDETLRASYRGGSPSAATPKSGRSLSRFARDGSFGSRSP 499

Query: 223 ALKEGSNPPW 252
           ++KEGSNP W
Sbjct: 500 SVKEGSNPAW 509


>ref|XP_002321178.1| predicted protein [Populus trichocarpa] gi|222861951|gb|EEE99493.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/70 (68%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
 Frame = +1

Query: 46  RTLSPAAQKFVR-SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSP 222
           RTLSPAAQKFVR ++++S S++DETLRASYRGASP  GTPK+GRS++RFGRD    S+SP
Sbjct: 402 RTLSPAAQKFVRKAISRSLSSVDETLRASYRGASPGVGTPKSGRSISRFGRDGSMGSRSP 461

Query: 223 ALKEGSNPPW 252
           +++E SNPPW
Sbjct: 462 SVRENSNPPW 471


>ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]
          Length = 504

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/71 (69%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
 Frame = +1

Query: 43  VRTLSPAAQKFVRS-MAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKS 219
           VRTLS AAQKFVR+ +AKSS ++DE+LRASYRGASP   TPK+GRS++RFGRD   S++S
Sbjct: 434 VRTLSHAAQKFVRNAIAKSSCSVDESLRASYRGASPGISTPKSGRSMSRFGRDGSTSTRS 493

Query: 220 PALKEGSNPPW 252
           P+++EGSNPPW
Sbjct: 494 PSVREGSNPPW 504


>ref|XP_002533868.1| protein with unknown function [Ricinus communis]
           gi|223526190|gb|EEF28518.1| protein with unknown
           function [Ricinus communis]
          Length = 519

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/71 (66%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
 Frame = +1

Query: 43  VRTLSPAAQKFVRS-MAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKS 219
           VRTLSPAAQKF+R+ ++KSSS++DE+LRASYRG+SP  GTPK+ RS++RFGRD    S+S
Sbjct: 449 VRTLSPAAQKFMRNAISKSSSSVDESLRASYRGSSPGIGTPKSVRSVSRFGRDGSMGSRS 508

Query: 220 PALKEGSNPPW 252
           P+++E SNPPW
Sbjct: 509 PSVREDSNPPW 519


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