BLASTX nr result

ID: Coptis24_contig00009421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009421
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondri...   533   e-149
emb|CBI34574.3| unnamed protein product [Vitis vinifera]              533   e-149
ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis] gi...   510   e-142
ref|XP_004143846.1| PREDICTED: UPF0160 protein-like [Cucumis sat...   507   e-141
emb|CAN62285.1| hypothetical protein VITISV_034702 [Vitis vinifera]   507   e-141

>ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Vitis vinifera]
          Length = 361

 Score =  533 bits (1374), Expect = e-149
 Identities = 259/347 (74%), Positives = 294/347 (84%)
 Frame = +2

Query: 140  KRVGTHNGTFHCDEALGCYMIRLTDKFNSAEIVRTRDSKVLETLDAVLDVGGVYDESKDR 319
            KRVGTHNG+FHCDEALGC+MIRLTDKF  A+IVRTRD KVL+ LDAVLDVGGVYD S+DR
Sbjct: 39   KRVGTHNGSFHCDEALGCFMIRLTDKFRDAQIVRTRDQKVLDGLDAVLDVGGVYDPSRDR 98

Query: 320  YDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKLDQGHPDVHRLFLAVYKSFV 499
            YDHHQKGF EVFGHGF TKLSSAGLVYKH+GMEIIAKEL+LDQGHPDV RLFLAVYKSF+
Sbjct: 99   YDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGMEIIAKELQLDQGHPDVLRLFLAVYKSFM 158

Query: 500  EAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDLDNSAEKENEAFHRAMSLAG 679
            EA+DA DNGIN+YDTD P RYV+NT L SRVG+LNLDWMD D S+EKENEAF RAM+L+G
Sbjct: 159  EAVDAVDNGINQYDTDQPLRYVNNTHLSSRVGKLNLDWMDPDQSSEKENEAFERAMNLSG 218

Query: 680  SEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLHKFCPWKLHIYELEEEMKID 859
            SEF++NVRF+A+SWLPARSIV++CLAAR D+D SGEIM L++FCPWKLH++ELEEEMKID
Sbjct: 219  SEFLDNVRFHAKSWLPARSIVMECLAARMDIDPSGEIMVLNRFCPWKLHLFELEEEMKID 278

Query: 860  PPIKYVLYEADRSKNWRVQAVAVSPDKFESRKPXXXXXXXXXXXXXXXXXXXXXXKFESR 1039
            PPIKYVLY+ DRSK+WRVQAVAV+PDKFE                             SR
Sbjct: 279  PPIKYVLYQDDRSKHWRVQAVAVAPDKFE-----------------------------SR 309

Query: 1040 KPLPAQWRGLRDEELSKESSILGCVFVHMSGFIGGNATYDGALAMAR 1180
            KPLP+QWRGLRD+ELS+E+ I GCVFVHMSGFIGGN  Y+GALAMA+
Sbjct: 310  KPLPSQWRGLRDDELSREAGIPGCVFVHMSGFIGGNQNYEGALAMAK 356


>emb|CBI34574.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  533 bits (1374), Expect = e-149
 Identities = 259/347 (74%), Positives = 294/347 (84%)
 Frame = +2

Query: 140  KRVGTHNGTFHCDEALGCYMIRLTDKFNSAEIVRTRDSKVLETLDAVLDVGGVYDESKDR 319
            KRVGTHNG+FHCDEALGC+MIRLTDKF  A+IVRTRD KVL+ LDAVLDVGGVYD S+DR
Sbjct: 16   KRVGTHNGSFHCDEALGCFMIRLTDKFRDAQIVRTRDQKVLDGLDAVLDVGGVYDPSRDR 75

Query: 320  YDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKLDQGHPDVHRLFLAVYKSFV 499
            YDHHQKGF EVFGHGF TKLSSAGLVYKH+GMEIIAKEL+LDQGHPDV RLFLAVYKSF+
Sbjct: 76   YDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGMEIIAKELQLDQGHPDVLRLFLAVYKSFM 135

Query: 500  EAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDLDNSAEKENEAFHRAMSLAG 679
            EA+DA DNGIN+YDTD P RYV+NT L SRVG+LNLDWMD D S+EKENEAF RAM+L+G
Sbjct: 136  EAVDAVDNGINQYDTDQPLRYVNNTHLSSRVGKLNLDWMDPDQSSEKENEAFERAMNLSG 195

Query: 680  SEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLHKFCPWKLHIYELEEEMKID 859
            SEF++NVRF+A+SWLPARSIV++CLAAR D+D SGEIM L++FCPWKLH++ELEEEMKID
Sbjct: 196  SEFLDNVRFHAKSWLPARSIVMECLAARMDIDPSGEIMVLNRFCPWKLHLFELEEEMKID 255

Query: 860  PPIKYVLYEADRSKNWRVQAVAVSPDKFESRKPXXXXXXXXXXXXXXXXXXXXXXKFESR 1039
            PPIKYVLY+ DRSK+WRVQAVAV+PDKFE                             SR
Sbjct: 256  PPIKYVLYQDDRSKHWRVQAVAVAPDKFE-----------------------------SR 286

Query: 1040 KPLPAQWRGLRDEELSKESSILGCVFVHMSGFIGGNATYDGALAMAR 1180
            KPLP+QWRGLRD+ELS+E+ I GCVFVHMSGFIGGN  Y+GALAMA+
Sbjct: 287  KPLPSQWRGLRDDELSREAGIPGCVFVHMSGFIGGNQNYEGALAMAK 333


>ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis] gi|223541884|gb|EEF43430.1|
            Protein MYG1, putative [Ricinus communis]
          Length = 373

 Score =  510 bits (1313), Expect = e-142
 Identities = 247/348 (70%), Positives = 289/348 (83%)
 Frame = +2

Query: 137  PKRVGTHNGTFHCDEALGCYMIRLTDKFNSAEIVRTRDSKVLETLDAVLDVGGVYDESKD 316
            PKRVGTHNG+FHCDEALGC+MIRLT+KF++AEIVR+RD +VLE+LDAVLDVGGVYD   D
Sbjct: 50   PKRVGTHNGSFHCDEALGCFMIRLTNKFSNAEIVRSRDLQVLESLDAVLDVGGVYDPVHD 109

Query: 317  RYDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKLDQGHPDVHRLFLAVYKSF 496
            RYDHHQKGFEEVFGHGF TKLSSAGLVYKH+G EIIAKEL+LD+GHP+VHRLFLA+YKSF
Sbjct: 110  RYDHHQKGFEEVFGHGFTTKLSSAGLVYKHFGKEIIAKELQLDEGHPNVHRLFLAIYKSF 169

Query: 497  VEAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDLDNSAEKENEAFHRAMSLA 676
            +EAIDA DNGIN+YDTD P RYV+NT L SRVGRLNLDW++ D S EKENE F RAM+LA
Sbjct: 170  MEAIDAVDNGINQYDTDKPPRYVNNTHLSSRVGRLNLDWIEPDQSPEKENEVFQRAMTLA 229

Query: 677  GSEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLHKFCPWKLHIYELEEEMKI 856
            GSEF++++ ++A+SWLPARSIV++CL AR DVD SGEIM L  FCPWKLH++E+EEE+KI
Sbjct: 230  GSEFLDSLHYHAKSWLPARSIVMECLEARSDVDPSGEIMVLATFCPWKLHLFEIEEELKI 289

Query: 857  DPPIKYVLYEADRSKNWRVQAVAVSPDKFESRKPXXXXXXXXXXXXXXXXXXXXXXKFES 1036
            +P IKYVLY+ DRSK+WRVQAVAV+PD                             +FES
Sbjct: 290  EPSIKYVLYQDDRSKHWRVQAVAVAPD-----------------------------RFES 320

Query: 1037 RKPLPAQWRGLRDEELSKESSILGCVFVHMSGFIGGNATYDGALAMAR 1180
            R+ LPAQWRGLRD+ELS+ES I  CVFVHMSGFIGGN +Y+GALAMAR
Sbjct: 321  RRALPAQWRGLRDDELSRESGIPACVFVHMSGFIGGNKSYEGALAMAR 368


>ref|XP_004143846.1| PREDICTED: UPF0160 protein-like [Cucumis sativus]
            gi|449509379|ref|XP_004163571.1| PREDICTED: UPF0160
            protein-like [Cucumis sativus]
          Length = 345

 Score =  507 bits (1305), Expect = e-141
 Identities = 248/347 (71%), Positives = 286/347 (82%)
 Frame = +2

Query: 140  KRVGTHNGTFHCDEALGCYMIRLTDKFNSAEIVRTRDSKVLETLDAVLDVGGVYDESKDR 319
            KRVGTH+G+FHCDEALGC+MIRLTDKF++A+IVRTRD +VL+ LDAVLDVGGVYD S DR
Sbjct: 23   KRVGTHHGSFHCDEALGCFMIRLTDKFSNAQIVRTRDPQVLQGLDAVLDVGGVYDPSHDR 82

Query: 320  YDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKLDQGHPDVHRLFLAVYKSFV 499
            YDHHQKGFEEVFGHGF TKLSSAGLVYKH+G EIIAKEL++D+GHPDVHRLFLAVYKSF+
Sbjct: 83   YDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKEIIAKELQVDEGHPDVHRLFLAVYKSFM 142

Query: 500  EAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDLDNSAEKENEAFHRAMSLAG 679
            EAIDA DNGIN+YDTD P +YV+NT L SRVGRLNLDW+D D S E EN+AF +AM+LAG
Sbjct: 143  EAIDAVDNGINQYDTDKPPKYVNNTHLSSRVGRLNLDWIDPDQSPENENKAFEKAMALAG 202

Query: 680  SEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLHKFCPWKLHIYELEEEMKID 859
            +EF+++VRF+A+SWLPARSIV+  LAAR  +D SGEIM +  FCPWKLH++ELE E+KI+
Sbjct: 203  NEFLDSVRFHAKSWLPARSIVMGSLAARHTIDPSGEIMVMTTFCPWKLHLFELEAELKIE 262

Query: 860  PPIKYVLYEADRSKNWRVQAVAVSPDKFESRKPXXXXXXXXXXXXXXXXXXXXXXKFESR 1039
              IKYVLY+ DRSK+WRVQAVAVSPD+F                             ESR
Sbjct: 263  NSIKYVLYQDDRSKHWRVQAVAVSPDRF-----------------------------ESR 293

Query: 1040 KPLPAQWRGLRDEELSKESSILGCVFVHMSGFIGGNATYDGALAMAR 1180
            +PLPAQWRGLRDEELSKES I GCVFVHMSGFIGGN TYDGAL MA+
Sbjct: 294  RPLPAQWRGLRDEELSKESGIPGCVFVHMSGFIGGNQTYDGALTMAK 340


>emb|CAN62285.1| hypothetical protein VITISV_034702 [Vitis vinifera]
          Length = 325

 Score =  507 bits (1305), Expect = e-141
 Identities = 252/347 (72%), Positives = 283/347 (81%)
 Frame = +2

Query: 140  KRVGTHNGTFHCDEALGCYMIRLTDKFNSAEIVRTRDSKVLETLDAVLDVGGVYDESKDR 319
            KRVGTHNG+FHCDEALGC+MIRLTDKF  A+IVRTRD KVL+ LDAVLDVGGVYD S+DR
Sbjct: 6    KRVGTHNGSFHCDEALGCFMIRLTDKFRDAQIVRTRDQKVLDGLDAVLDVGGVYDPSRDR 65

Query: 320  YDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKLDQGHPDVHRLFLAVYKSFV 499
            YDHHQKGF EVFGHGF TKLSSAGLVYKH+GMEIIAKEL+LDQGHPDV RLFLAVYKSF+
Sbjct: 66   YDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGMEIIAKELQLDQGHPDVLRLFLAVYKSFM 125

Query: 500  EAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDLDNSAEKENEAFHRAMSLAG 679
            EA+DA DNGIN+YDTD P RYV+NT L SRVG+LNLDWMD D S+EKENEAF RAM+L+G
Sbjct: 126  EAVDAVDNGINQYDTDQPXRYVNNTHLSSRVGKLNLDWMDPDQSSEKENEAFERAMNLSG 185

Query: 680  SEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLHKFCPWKLHIYELEEEMKID 859
            SE      F     LPARSIV++CLAAR D+D SGEIM L++FCPWKLH++ELEEEMKID
Sbjct: 186  SEMFV---FMQSHGLPARSIVMECLAARMDIDPSGEIMVLNRFCPWKLHLFELEEEMKID 242

Query: 860  PPIKYVLYEADRSKNWRVQAVAVSPDKFESRKPXXXXXXXXXXXXXXXXXXXXXXKFESR 1039
            PPIKYVLY+ DRSK+WRVQAVAV+PDKFE                             SR
Sbjct: 243  PPIKYVLYQDDRSKHWRVQAVAVAPDKFE-----------------------------SR 273

Query: 1040 KPLPAQWRGLRDEELSKESSILGCVFVHMSGFIGGNATYDGALAMAR 1180
            KPLP+QWRGLRD+ELS+E+ I GCVFVHMSGFIGGN  Y+GALAMA+
Sbjct: 274  KPLPSQWRGLRDDELSREAGIPGCVFVHMSGFIGGNQNYEGALAMAK 320


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