BLASTX nr result
ID: Coptis24_contig00009408
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009408 (746 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|2... 58 2e-06 ref|NP_001131744.1| uncharacterized protein LOC100193110 [Zea ma... 56 7e-06 >ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|222848825|gb|EEE86372.1| predicted protein [Populus trichocarpa] Length = 348 Score = 57.8 bits (138), Expect = 2e-06 Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%) Frame = +2 Query: 455 VAKTVLDVFEKSIEEVK-LGFRDNTGSSSEQGKEAELMKRFREQSLSELDVLASRLRLVI 631 VAK+VL+VF++ ++EVK + ++ SS E KE + +R+REQ ++E DVLA RLRL++ Sbjct: 284 VAKSVLNVFDECVKEVKKVVLKERLDSSMEGKKEKDFQRRWREQRVAEFDVLALRLRLLL 343 Query: 632 ENS 640 +NS Sbjct: 344 DNS 346 >ref|NP_001131744.1| uncharacterized protein LOC100193110 [Zea mays] gi|194692410|gb|ACF80289.1| unknown [Zea mays] gi|413933310|gb|AFW67861.1| hypothetical protein ZEAMMB73_897306 [Zea mays] Length = 380 Score = 56.2 bits (134), Expect = 7e-06 Identities = 29/60 (48%), Positives = 40/60 (66%) Frame = +2 Query: 455 VAKTVLDVFEKSIEEVKLGFRDNTGSSSEQGKEAELMKRFREQSLSELDVLASRLRLVIE 634 +A VLDVFE+ + E K N G+ G+E+EL KR+R Q + ELDVL+ RLRL++E Sbjct: 314 MANAVLDVFEECLREAKSNGVINGGNVDGSGEESELSKRWRAQRMDELDVLSRRLRLLVE 373