BLASTX nr result

ID: Coptis24_contig00009408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009408
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06
ref|NP_001131744.1| uncharacterized protein LOC100193110 [Zea ma...    56   7e-06

>ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|222848825|gb|EEE86372.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
 Frame = +2

Query: 455 VAKTVLDVFEKSIEEVK-LGFRDNTGSSSEQGKEAELMKRFREQSLSELDVLASRLRLVI 631
           VAK+VL+VF++ ++EVK +  ++   SS E  KE +  +R+REQ ++E DVLA RLRL++
Sbjct: 284 VAKSVLNVFDECVKEVKKVVLKERLDSSMEGKKEKDFQRRWREQRVAEFDVLALRLRLLL 343

Query: 632 ENS 640
           +NS
Sbjct: 344 DNS 346


>ref|NP_001131744.1| uncharacterized protein LOC100193110 [Zea mays]
           gi|194692410|gb|ACF80289.1| unknown [Zea mays]
           gi|413933310|gb|AFW67861.1| hypothetical protein
           ZEAMMB73_897306 [Zea mays]
          Length = 380

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = +2

Query: 455 VAKTVLDVFEKSIEEVKLGFRDNTGSSSEQGKEAELMKRFREQSLSELDVLASRLRLVIE 634
           +A  VLDVFE+ + E K     N G+    G+E+EL KR+R Q + ELDVL+ RLRL++E
Sbjct: 314 MANAVLDVFEECLREAKSNGVINGGNVDGSGEESELSKRWRAQRMDELDVLSRRLRLLVE 373


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