BLASTX nr result

ID: Coptis24_contig00009406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009406
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544863.1| PREDICTED: uncharacterized protein LOC100781...   105   3e-21
ref|XP_002524602.1| conserved hypothetical protein [Ricinus comm...   104   9e-21
ref|XP_002863315.1| hypothetical protein ARALYDRAFT_359123 [Arab...   103   1e-20
ref|XP_003573997.1| PREDICTED: uncharacterized protein LOC100821...   102   3e-20
ref|XP_002320534.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20

>ref|XP_003544863.1| PREDICTED: uncharacterized protein LOC100781040 [Glycine max]
          Length = 569

 Score =  105 bits (263), Expect = 3e-21
 Identities = 46/57 (80%), Positives = 51/57 (89%)
 Frame = -2

Query: 258 WYAETMKLNKGNPVEFDGYMRVSVDTEVLLRGKKQVETFNDLTSDCRDGINTCRATS 88
           WY+ET KLN GNPVEFDGYMRVS+DTEV LRGKKQ+ETFNDLTSDC+DGINTC   +
Sbjct: 512 WYSETTKLNNGNPVEFDGYMRVSIDTEVFLRGKKQLETFNDLTSDCKDGINTCNVAA 568


>ref|XP_002524602.1| conserved hypothetical protein [Ricinus communis]
           gi|223536155|gb|EEF37810.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 573

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/57 (80%), Positives = 51/57 (89%)
 Frame = -2

Query: 258 WYAETMKLNKGNPVEFDGYMRVSVDTEVLLRGKKQVETFNDLTSDCRDGINTCRATS 88
           WY+ET KLNKG PVEFDGYMRVSVDTEV LRGKKQ+ETFNDLT+DC+DGINTC   +
Sbjct: 516 WYSETTKLNKGVPVEFDGYMRVSVDTEVFLRGKKQIETFNDLTNDCKDGINTCNTAA 572


>ref|XP_002863315.1| hypothetical protein ARALYDRAFT_359123 [Arabidopsis lyrata subsp.
           lyrata] gi|297309149|gb|EFH39574.1| hypothetical protein
           ARALYDRAFT_359123 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/57 (78%), Positives = 50/57 (87%)
 Frame = -2

Query: 258 WYAETMKLNKGNPVEFDGYMRVSVDTEVLLRGKKQVETFNDLTSDCRDGINTCRATS 88
           WY+ETMKLN GNPV+FDGYMR SVDTEV LRGKKQ+ETFNDLT+DCRDGI TC   +
Sbjct: 500 WYSETMKLNGGNPVDFDGYMRASVDTEVFLRGKKQIETFNDLTNDCRDGIGTCHVAA 556


>ref|XP_003573997.1| PREDICTED: uncharacterized protein LOC100821421 [Brachypodium
           distachyon]
          Length = 632

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/57 (77%), Positives = 52/57 (91%)
 Frame = -2

Query: 258 WYAETMKLNKGNPVEFDGYMRVSVDTEVLLRGKKQVETFNDLTSDCRDGINTCRATS 88
           WYAET +LN GNPVEFDGYMRV+VDTEV LRGK+++ETFNDLT DC+DG+NTC A+S
Sbjct: 576 WYAETKELNNGNPVEFDGYMRVAVDTEVFLRGKRKLETFNDLTHDCKDGVNTCAASS 632


>ref|XP_002320534.1| predicted protein [Populus trichocarpa] gi|222861307|gb|EEE98849.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/57 (77%), Positives = 51/57 (89%)
 Frame = -2

Query: 258 WYAETMKLNKGNPVEFDGYMRVSVDTEVLLRGKKQVETFNDLTSDCRDGINTCRATS 88
           WY+ET  LNKG PVEFDGYMR+SVDTEV LRGKKQ+ETFNDLT+DC+DG+NTC A +
Sbjct: 520 WYSETKALNKGVPVEFDGYMRISVDTEVFLRGKKQIETFNDLTNDCKDGVNTCSAAA 576


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