BLASTX nr result

ID: Coptis24_contig00009402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009402
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330217.1| predicted protein [Populus trichocarpa] gi|2...   172   4e-41
ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265...   169   4e-40
ref|XP_002512452.1| conserved hypothetical protein [Ricinus comm...   169   6e-40
emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]   167   1e-39
gb|ABK94827.1| unknown [Populus trichocarpa]                          163   3e-38

>ref|XP_002330217.1| predicted protein [Populus trichocarpa] gi|222871673|gb|EEF08804.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  172 bits (437), Expect = 4e-41
 Identities = 86/171 (50%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
 Frame = -3

Query: 657 KLSAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAYLNGSCSFSIQG-YQLKYKSKITG 481
           K +AYE+L  Y+FP GLLP+GV GY L+  TG+F+A+LNGSCSFS++G YQL+YKS + G
Sbjct: 33  KPTAYEILGDYNFPKGLLPKGVVGYSLDTTTGRFSAFLNGSCSFSLEGSYQLRYKSSVNG 92

Query: 480 YISKDKLTQLKGVTVKILFIWVNIIEVTSSGNELGFSVGIIXXXXXXXXXXXXXXXXXXX 301
           YIS+ +L++L+GV+VK+ F+WV+I+EV  +G++L FSVGI                    
Sbjct: 93  YISQGRLSRLEGVSVKVFFMWVDIVEVLRNGDDLEFSVGI-------------------- 132

Query: 300 XXXXXXXXXXXSANFPIDNFDESPQCGCGFECNKKKKKVWSIRTNPFVSSS 148
                       A FPIDNF+E PQCGCG  C+  K+KV  IR+NPFVSSS
Sbjct: 133 ----------AGAGFPIDNFEECPQCGCGLNCSGAKRKVSKIRSNPFVSSS 173


>ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265898 [Vitis vinifera]
          Length = 162

 Score =  169 bits (428), Expect = 4e-40
 Identities = 86/168 (51%), Positives = 114/168 (67%), Gaps = 1/168 (0%)
 Frame = -3

Query: 651 SAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAYLNGSCSFSIQG-YQLKYKSKITGYI 475
           +AYE+L+SY+FP+GLLP+G  GY+L+  TGKF AY NGSC FS++G YQLKYKS I+GYI
Sbjct: 26  TAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFNGSCGFSLEGSYQLKYKSTISGYI 85

Query: 474 SKDKLTQLKGVTVKILFIWVNIIEVTSSGNELGFSVGIIXXXXXXXXXXXXXXXXXXXXX 295
           S++KLT+L G++VK+LF+W+NI+EVT +G+++ FSVGI                      
Sbjct: 86  SQNKLTKLSGISVKVLFLWLNIVEVTRNGDDMEFSVGI---------------------- 123

Query: 294 XXXXXXXXXSANFPIDNFDESPQCGCGFECNKKKKKVWSIRTNPFVSS 151
                    SA FPIDNF E PQCGCG +C     +V  ++TNPFVSS
Sbjct: 124 --------ASAAFPIDNFFECPQCGCGLDC--VNGQVRKLKTNPFVSS 161


>ref|XP_002512452.1| conserved hypothetical protein [Ricinus communis]
           gi|255591191|ref|XP_002535460.1| conserved hypothetical
           protein [Ricinus communis] gi|223523035|gb|EEF26923.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223548413|gb|EEF49904.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  169 bits (427), Expect = 6e-40
 Identities = 86/168 (51%), Positives = 116/168 (69%), Gaps = 1/168 (0%)
 Frame = -3

Query: 651 SAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAYLNGSCSFSIQG-YQLKYKSKITGYI 475
           +AYE+L  Y+FP GLLP+GV GY+L+  +GKF+A+LNG+CSFS++G YQL+YKS I G+I
Sbjct: 36  TAYEILSDYNFPKGLLPKGVIGYDLDTTSGKFSAFLNGTCSFSLEGSYQLRYKSTIRGHI 95

Query: 474 SKDKLTQLKGVTVKILFIWVNIIEVTSSGNELGFSVGIIXXXXXXXXXXXXXXXXXXXXX 295
           SK KL+ L+GV+VK+LF+WV+I+EV+ SG++L FSVGI                      
Sbjct: 96  SKGKLSSLQGVSVKLLFMWVDIVEVSRSGDDLEFSVGI---------------------- 133

Query: 294 XXXXXXXXXSANFPIDNFDESPQCGCGFECNKKKKKVWSIRTNPFVSS 151
                     A FPIDNF+ESPQCGCG +C   ++KV  +R+NPFVSS
Sbjct: 134 --------AGAGFPIDNFEESPQCGCGLDCG-DRRKVSKMRSNPFVSS 172


>emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]
          Length = 162

 Score =  167 bits (424), Expect = 1e-39
 Identities = 86/168 (51%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
 Frame = -3

Query: 651 SAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAYLNGSCSFSIQG-YQLKYKSKITGYI 475
           +AYE+L+SY+FP+GLLP+G  GY+L+  TGKF AY NGSC FS++G YQLKYKS I+GYI
Sbjct: 26  TAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFNGSCGFSLEGSYQLKYKSTISGYI 85

Query: 474 SKDKLTQLKGVTVKILFIWVNIIEVTSSGNELGFSVGIIXXXXXXXXXXXXXXXXXXXXX 295
           S++KLT+L G +VK+LF+W+NI+EVT +G+++ FSVGI                      
Sbjct: 86  SQNKLTKLSGXSVKVLFLWLNIVEVTRNGDDMEFSVGI---------------------- 123

Query: 294 XXXXXXXXXSANFPIDNFDESPQCGCGFECNKKKKKVWSIRTNPFVSS 151
                    SA FPIDNF E PQCGCG +C     +V  ++TNPFVSS
Sbjct: 124 --------ASAAFPIDNFFECPQCGCGLDC--VNGQVRKLKTNPFVSS 161


>gb|ABK94827.1| unknown [Populus trichocarpa]
          Length = 175

 Score =  163 bits (412), Expect = 3e-38
 Identities = 82/169 (48%), Positives = 110/169 (65%), Gaps = 1/169 (0%)
 Frame = -3

Query: 651 SAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAYLNGSCSFSIQG-YQLKYKSKITGYI 475
           +AY++L  Y+ P GLLP+GV GY L+   GKF+A+ NG+CSFS++G YQL+YKS I GYI
Sbjct: 37  TAYDILGDYNLPKGLLPKGVVGYSLDTTAGKFSAFWNGTCSFSLEGSYQLRYKSTINGYI 96

Query: 474 SKDKLTQLKGVTVKILFIWVNIIEVTSSGNELGFSVGIIXXXXXXXXXXXXXXXXXXXXX 295
           SK +L++L+GV+VK+ F WV+II+VT +G++L FSVGI                      
Sbjct: 97  SKGRLSRLEGVSVKLFFFWVDIIDVTRNGDDLEFSVGI---------------------- 134

Query: 294 XXXXXXXXXSANFPIDNFDESPQCGCGFECNKKKKKVWSIRTNPFVSSS 148
                     A+F +DNF+E PQCGCG  C  K +KV  IR+NPFVSSS
Sbjct: 135 --------AGADFSVDNFEECPQCGCGLNCGGKTRKVSKIRSNPFVSSS 175


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