BLASTX nr result

ID: Coptis24_contig00009400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009400
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32923.3| unnamed protein product [Vitis vinifera]               84   3e-14
ref|XP_002271760.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    84   3e-14
ref|XP_003568142.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    79   9e-13
ref|XP_002316872.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-12
ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricin...    78   3e-12

>emb|CBI32923.3| unnamed protein product [Vitis vinifera]
          Length = 635

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 48/95 (50%), Positives = 57/95 (60%)
 Frame = -2

Query: 818 DVHQAAVEKIDEISSSRLAKDASSRLRSCGWYDEVHRFMRGKKRLCAEKGGDAISDTELK 639
           D H  A  K++E     L K+AS  LRSCGW D ++ FM  +KRLCA+K GD  S  E K
Sbjct: 540 DAHSLA--KVEEFKDG-LKKEASLVLRSCGWTDRLYIFMHSRKRLCAQKSGDPPSSNESK 596

Query: 638 KLLIEEASQIFKRQIPASLTQHLINYLKSFHQGKQ 534
           K  I +A Q F  QIP SL + LI  LKSF Q KQ
Sbjct: 597 KSFIADAKQSFISQIPESLKEKLIERLKSFSQEKQ 631


>ref|XP_002271760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Vitis
           vinifera]
          Length = 631

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 48/95 (50%), Positives = 57/95 (60%)
 Frame = -2

Query: 818 DVHQAAVEKIDEISSSRLAKDASSRLRSCGWYDEVHRFMRGKKRLCAEKGGDAISDTELK 639
           D H  A  K++E     L K+AS  LRSCGW D ++ FM  +KRLCA+K GD  S  E K
Sbjct: 536 DAHSLA--KVEEFKDG-LKKEASLVLRSCGWTDRLYIFMHSRKRLCAQKSGDPPSSNESK 592

Query: 638 KLLIEEASQIFKRQIPASLTQHLINYLKSFHQGKQ 534
           K  I +A Q F  QIP SL + LI  LKSF Q KQ
Sbjct: 593 KSFIADAKQSFISQIPESLKEKLIERLKSFSQEKQ 627


>ref|XP_003568142.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like
           [Brachypodium distachyon]
          Length = 641

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 36/77 (46%), Positives = 54/77 (70%)
 Frame = -2

Query: 767 LAKDASSRLRSCGWYDEVHRFMRGKKRLCAEKGGDAISDTELKKLLIEEASQIFKRQIPA 588
           LA+ ASS LRSCGW D+V++FMR  KR C E  G A  + E++K LI ++ ++FK ++P 
Sbjct: 564 LAESASSELRSCGWVDDVYQFMRSTKRRCIENTGIAQDNDEIRKQLITDSGRVFKSKVPE 623

Query: 587 SLTQHLINYLKSFHQGK 537
           +L + LI  LKS+++ K
Sbjct: 624 ALRERLIKTLKSYYEDK 640


>ref|XP_002316872.1| predicted protein [Populus trichocarpa] gi|222859937|gb|EEE97484.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 42/90 (46%), Positives = 60/90 (66%)
 Frame = -2

Query: 803 AVEKIDEISSSRLAKDASSRLRSCGWYDEVHRFMRGKKRLCAEKGGDAISDTELKKLLIE 624
           ++ KI+E   + L + AS  L SCG++D+V+ FMR +KRLC  + G+  S TELKKLLI 
Sbjct: 557 SLAKIEEFKEA-LKQQASLILGSCGFFDKVYDFMRARKRLCVHEAGNKPSGTELKKLLIA 615

Query: 623 EASQIFKRQIPASLTQHLINYLKSFHQGKQ 534
           +A + F  QIP SL + L+  L+SF Q K+
Sbjct: 616 DAKRTFISQIPESLKEDLVKRLQSFSQEKR 645


>ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricinus communis]
           gi|223531005|gb|EEF32859.1| cysteine-type endopeptidase,
           putative [Ricinus communis]
          Length = 644

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 40/77 (51%), Positives = 52/77 (67%)
 Frame = -2

Query: 767 LAKDASSRLRSCGWYDEVHRFMRGKKRLCAEKGGDAISDTELKKLLIEEASQIFKRQIPA 588
           L ++AS+ LRSCGW  +V+ FM  +KRLCA + G+  SD +LKKLLI EA   F  QIP 
Sbjct: 568 LKQEASTVLRSCGWSSKVYSFMCSRKRLCAREPGNLPSDIDLKKLLIAEAKSTFISQIPE 627

Query: 587 SLTQHLINYLKSFHQGK 537
           SL + L+  L+SF Q K
Sbjct: 628 SLKEDLVKRLQSFSQEK 644


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