BLASTX nr result
ID: Coptis24_contig00009399
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009399
(1788 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257... 647 0.0
ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|2... 620 e-175
ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218... 605 e-170
ref|XP_002518251.1| conserved hypothetical protein [Ricinus comm... 596 e-168
ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like... 595 e-167
>ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257645 [Vitis vinifera]
gi|297737934|emb|CBI27135.3| unnamed protein product
[Vitis vinifera]
Length = 552
Score = 647 bits (1669), Expect = 0.0
Identities = 335/527 (63%), Positives = 392/527 (74%), Gaps = 17/527 (3%)
Frame = +1
Query: 34 DVVPSVKLQLDKDIYRPGDSVAVTITIHN-----------QECGS----LLVEKLSFEIK 168
++VPS+KL+ DKD+YRPG+S+ V+I IHN + G LLVE LSFEIK
Sbjct: 31 ELVPSLKLRTDKDVYRPGESIVVSIEIHNPSGVVDELSKKENAGDVLCPLLVEMLSFEIK 90
Query: 169 GIEKLDTQWFSTSKTPAPGSKHRRGEQAFLECSTPSFISNQILSSGGTKTYLLRAELPKI 348
GIEKLD+QW++T K P PGSK RRGE FL+C+TPS +SNQI+S+G KTY+ R ELP I
Sbjct: 91 GIEKLDSQWYATQK-PLPGSKQRRGEHTFLDCATPSIVSNQIVSAGAVKTYVARTELPSI 149
Query: 349 IPPTYRGTTIRYFYYVRSTLAGRWLVRENGQFRRESLKDLIQLEERTPLQVWVSHNTSGL 528
+PP+YRG TIRYFYYVR TL+GRWLV ENG RES KDLI+LE R PLQ+WV+ TSGL
Sbjct: 150 VPPSYRGATIRYFYYVRCTLSGRWLVLENGHSPRESRKDLIELEARIPLQIWVTQKTSGL 209
Query: 529 LVEEGLSDGILPASTLSMDIYWKEKDSDSEWARANETPEAIEEGYEXXXXXXXXXXXYNP 708
L+EEG +DGI+P + + MD+YWKE D DS+W RANET + +EEGYE YNP
Sbjct: 210 LIEEGHNDGIVPNTAIQMDVYWKEMDGDSDWVRANETYDGVEEGYESSRDEVSSVSSYNP 269
Query: 709 TRGNIDHAQGSSLSRLSSAPKFLSRDAPYLHGDRSSFSSYVALPQLSVDEFLYDSSGDLQ 888
+ NI + GSSLS S + + PYL G+R+S SSYVALP+LSV E + DSS D
Sbjct: 270 MKENIHKSFGSSLSLHSFSAR---SSTPYLEGERTSISSYVALPRLSVAEVINDSSLDAL 326
Query: 889 SPKKKYPDLLSPSRHGNHTNSLSNDDDTGVPSGPRTIERVASEGFVRGRSYNIRLDGQVL 1068
S +K + LSPS T +S DD+ GV + P T + ASEGF+RGRSYNIRLD QVL
Sbjct: 327 SSQKSSAN-LSPSEQRKDTKPISADDEAGVSTIPGTDDPAASEGFIRGRSYNIRLDDQVL 385
Query: 1069 LQFSPKNSDSTYYFGDTIGGTLAFSH-EGARRCLEVAITLEITETIGQRIVHPSRRNSPT 1245
L+FSPKNSDSTYYF D IGGTL F H EGARRCLEV+ITLE +ET+ +R HPSRRNS T
Sbjct: 386 LRFSPKNSDSTYYFSDMIGGTLTFFHEEGARRCLEVSITLESSETVNRRFAHPSRRNSLT 445
Query: 1246 ITKVQSDHHEVVADLGQTSFLFCIPMDGPMSFSTPHVSVQWALRFEFFTTRKNVDWTRYD 1425
ITKVQSDHHEVVADL QTSFLF IPMDGPMSFSTPHVSVQWALRFEFFTT KNVD TRY+
Sbjct: 446 ITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTPHVSVQWALRFEFFTTPKNVDLTRYE 505
Query: 1426 HPLLIEGRDKGEWVLPITVHVPPPRT-QTAQTRNKKSLSLVPIWVRT 1563
HPLLIEGRDK EWVLPITVH P T A TRN KS +L P+WVR+
Sbjct: 506 HPLLIEGRDKCEWVLPITVHATPSGTAAAAHTRNDKSFTLEPLWVRS 552
>ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|222853559|gb|EEE91106.1|
predicted protein [Populus trichocarpa]
Length = 533
Score = 620 bits (1600), Expect = e-175
Identities = 316/522 (60%), Positives = 383/522 (73%), Gaps = 12/522 (2%)
Frame = +1
Query: 34 DVVPSVKLQLDKDIYRPGDSVAVTITIHNQECG-------SLLVEKLSFEIKGIEKLDTQ 192
++VP++K+Q DKD+YRPGDS+ VTI I N + G SLL+EKL F I+GI+KLD Q
Sbjct: 23 ELVPTLKVQTDKDVYRPGDSILVTIEISNPKDGASEDVMSSLLIEKLGFAIRGIQKLDNQ 82
Query: 193 WFSTSKTPAPGSKHRRGEQAFLECSTPSFISNQILSSGGTKTYLLRAELPKIIPPTYRGT 372
WF+T K P PGSK RRGE F++CST S +SNQI+SSG TKTY++R LP IIPP+YRG
Sbjct: 83 WFATQK-PLPGSKQRRGEHVFMDCSTSSIVSNQIVSSGATKTYVVRTLLPSIIPPSYRGA 141
Query: 373 TIRYFYYVRSTLAGRWLVRENGQFRRESLKDLIQLEERTPLQVWVSHNTSGLLVEEGLSD 552
TIRY YYV STL+G+ L+ +N RES KDL+QLE+R PLQ+WV+ +GL+VEEG SD
Sbjct: 142 TIRYIYYVESTLSGQQLMLDNTNSHRESSKDLLQLEDRIPLQIWVAQKGNGLIVEEGQSD 201
Query: 553 GILPASTLSMDIYWKEKDSDSEWARANETPEAIEEGYEXXXXXXXXXXXYNPTRGNIDHA 732
GI+P +T+ +DIYWKE D D+EWARAN+ + +EEG+E YNP R +I
Sbjct: 202 GIVPPTTIQLDIYWKEMDGDNEWARANDLDDGVEEGHESLRDEISSVSSYNPNRESIHKT 261
Query: 733 QGSSLSRLSSAPKFLSRDAPYLHGDRSSFSSYVALPQLSVDEFLYDSSGDLQSPKKKYPD 912
GSSLS L S + ++DA + G R S S+ +ALP+LS E LYDS D+ P K
Sbjct: 262 FGSSLS-LQSVARSSNKDASFTEGGRRSLST-LALPRLSAAEVLYDSGADMAEPDKSSA- 318
Query: 913 LLSPSRHGNHTNSLSNDDDTGVPSGPRTI----ERVASEGFVRGRSYNIRLDGQVLLQFS 1080
++ PS+ DD GV P T+ E ASEGF+RGRSYNIR+D VLL+FS
Sbjct: 319 MVFPSQQ-------LRDDMAGVSYTPGTVSVNNEPAASEGFIRGRSYNIRMDDHVLLRFS 371
Query: 1081 PKNSDSTYYFGDTIGGTLAFSHE-GARRCLEVAITLEITETIGQRIVHPSRRNSPTITKV 1257
P+NSDSTYYF D IGGTL F HE GA++CLEV+ITLE +ET+ +R +HPSR+NSPTITKV
Sbjct: 372 PRNSDSTYYFSDMIGGTLTFFHEEGAKKCLEVSITLETSETVSRRYIHPSRKNSPTITKV 431
Query: 1258 QSDHHEVVADLGQTSFLFCIPMDGPMSFSTPHVSVQWALRFEFFTTRKNVDWTRYDHPLL 1437
QSDHHEVVADL QTSFLF IPMDGPMSFST HVSVQW LRFEFFTT KNVDWTRY+HPLL
Sbjct: 432 QSDHHEVVADLVQTSFLFSIPMDGPMSFSTSHVSVQWVLRFEFFTTPKNVDWTRYEHPLL 491
Query: 1438 IEGRDKGEWVLPITVHVPPPRTQTAQTRNKKSLSLVPIWVRT 1563
IEGRDK EWVLPITVH PPPR A +RN+K SL P+WVRT
Sbjct: 492 IEGRDKSEWVLPITVHAPPPRASAAHSRNEKGFSLEPLWVRT 533
>ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218523 [Cucumis sativus]
Length = 538
Score = 605 bits (1560), Expect = e-170
Identities = 306/514 (59%), Positives = 380/514 (73%), Gaps = 7/514 (1%)
Frame = +1
Query: 43 PSVKLQLDKDIYRPGDSVAVTITIHNQ----ECGSLLVEKLSFEIKGIEKLDTQWFSTSK 210
P +KL+ DKD+YRPGD V VTI I + +C SLL+E+L FEI G+ KLD QWFST K
Sbjct: 29 PGLKLRSDKDVYRPGDPVVVTIEICSSVPQLDC-SLLIERLRFEIIGLHKLDAQWFSTQK 87
Query: 211 TPAPGSKHRRGEQAFLECSTPSFISNQILSSGGTKTYLLRAELPKIIPPTYRGTTIRYFY 390
P PGSK RRGE F++CS S +S+QI+SSG K+Y++R+ LP IPP+Y+G TIRY Y
Sbjct: 88 -PIPGSKQRRGEHIFMDCSVQSIVSSQIISSGAMKSYVVRSTLPTCIPPSYKGATIRYMY 146
Query: 391 YVRSTLAGRWLVRENGQFRRESLKDLIQLEERTPLQVWVSHNTSGLLVEEGLSDGILPAS 570
YV+STL GRWL +ENG+ +ES KD I++E R PLQVWV+ T+G+L+EEG +DG L +
Sbjct: 147 YVKSTLLGRWLSQENGRSHKESPKDQIEMEARLPLQVWVTQKTNGMLMEEGQNDGDLSSL 206
Query: 571 TLSMDIYWKEKDSDSEWARANETPEAIEEGYEXXXXXXXXXXXYNPTRGNIDHAQGSSLS 750
+ MD++WKE +SD++W RAN+ + +EGY+ YNP R GSSLS
Sbjct: 207 SFQMDVFWKEMESDTDWIRANDIYDGTDEGYDSSRDEISSVSSYNPMREPFHRTFGSSLS 266
Query: 751 RLSSAPKFLSRDAPYLHGDRSSFSSYVALPQLSVDEFLYDSSGDLQSPKKKYPDLLSPSR 930
SSA + + AP++ G+R S SS VA P++SV E LY+S+ D+ SP+K + +SPS+
Sbjct: 267 LQSSAGRSSIKIAPFIEGERLSLSSNVARPRVSVAEVLYESA-DVASPQKSFA-AVSPSQ 324
Query: 931 HGNHTNSLSNDDDTGVPSGPR--TIERVASEGFVRGRSYNIRLDGQVLLQFSPKNSDSTY 1104
N + S DDD G + PR TIE VASEGF+RGRSYNIR+D QVLL+F PKNSDSTY
Sbjct: 325 VLNFEKNQSTDDDAGAATSPRPKTIEPVASEGFIRGRSYNIRVDDQVLLRFCPKNSDSTY 384
Query: 1105 YFGDTIGGTLAFSHE-GARRCLEVAITLEITETIGQRIVHPSRRNSPTITKVQSDHHEVV 1281
YF D IGGTL F HE G RRCLE++ITLE +ET+ +R +HPSRRNSPTI KVQSDH+EVV
Sbjct: 385 YFSDMIGGTLTFFHEEGTRRCLELSITLETSETVSRRFIHPSRRNSPTIVKVQSDHYEVV 444
Query: 1282 ADLGQTSFLFCIPMDGPMSFSTPHVSVQWALRFEFFTTRKNVDWTRYDHPLLIEGRDKGE 1461
ADL QTSFLF IPMDGPMSFSTPHVS+QWALRFEFFTT KNVDWTRY+HPLLIEGR+K E
Sbjct: 445 ADLIQTSFLFSIPMDGPMSFSTPHVSLQWALRFEFFTTPKNVDWTRYEHPLLIEGREKSE 504
Query: 1462 WVLPITVHVPPPRTQTAQTRNKKSLSLVPIWVRT 1563
WVLPITVH PP TAQ RN + SL P+W+ +
Sbjct: 505 WVLPITVHAPPSSAATAQNRNDRPFSLEPLWMHS 538
>ref|XP_002518251.1| conserved hypothetical protein [Ricinus communis]
gi|223542598|gb|EEF44137.1| conserved hypothetical
protein [Ricinus communis]
Length = 528
Score = 596 bits (1537), Expect = e-168
Identities = 308/524 (58%), Positives = 370/524 (70%), Gaps = 14/524 (2%)
Frame = +1
Query: 34 DVVPSVKLQLDKDIYRPGDSVAVTI-----------TIHNQECGSLLVEKLSFEIKGIEK 180
+V P++K+QLDKD+YRPGDSV VTI T+ + SLL+E+L FEIKGIEK
Sbjct: 32 EVSPTIKMQLDKDVYRPGDSVFVTIDISYPSNTETTTLLSSSSCSLLIERLGFEIKGIEK 91
Query: 181 LDTQWFSTSKTPAPGSKHRRGEQAFLECSTPSFISNQILSSGGTKTYLLRAELPKIIPPT 360
LD QWFST K P PGS H RGE F+ S PS +SNQILSS +K+Y++R ELP I+PPT
Sbjct: 92 LDPQWFSTHK-PLPGSAHSRGEHVFMVSSIPSLVSNQILSSAASKSYVVRVELPSILPPT 150
Query: 361 YRGTTIRYFYYVRSTLAGRWLVRENGQFRRESLKDLIQLEERTPLQVWVSHNTSGLLVEE 540
+RG+TIRYFYYV+ TL GRWL ENG RES KDLI+L+ R PL +WV+ ++GLL+EE
Sbjct: 151 FRGSTIRYFYYVKGTLCGRWLTLENGHSHRESSKDLIELDARVPLNIWVTQKSNGLLMEE 210
Query: 541 GLSDGILPASTLSMDIYWKEKDSDSEWARANETPEAIEEGYEXXXXXXXXXXXYNPTRGN 720
SDGI+PA+TL +D+YWK D DSEWAR N+ + +EEGY+ YNP++ +
Sbjct: 211 DQSDGIVPATTLQLDVYWKAMDGDSEWARVNDNDDGVEEGYDSSRDEISSVSSYNPSKES 270
Query: 721 IDHAQGSSLSRLSSAPKFLSRDAPYLHGDRSSFSSYVALPQLSVDEFLYDSSGDLQSPKK 900
+ GSSLS S A R+S SS V P+LSV E L+D S D+ S ++
Sbjct: 271 MHRTFGSSLSLQSFAA-------------RTSLSSNVGFPRLSVAEVLHDPSADVSSQQQ 317
Query: 901 KYPDLLSPSRHGNHTNSLSNDDDTGVPS--GPRTIERVASEGFVRGRSYNIRLDGQVLLQ 1074
+++ P +D G S G T E ASEGF+RGRSYNIR+D QVLL+
Sbjct: 318 ---NIVKPQ----------TEDVVGESSAHGIGTNEASASEGFIRGRSYNIRMDDQVLLR 364
Query: 1075 FSPKNSDSTYYFGDTIGGTLAFSHE-GARRCLEVAITLEITETIGQRIVHPSRRNSPTIT 1251
FSPKNSDS YYF D IGGTL F HE G RRCLEV+ITLEI+ETI +R VH SRRN+P IT
Sbjct: 365 FSPKNSDSNYYFSDMIGGTLTFFHEEGCRRCLEVSITLEISETISRRFVHSSRRNAPIIT 424
Query: 1252 KVQSDHHEVVADLGQTSFLFCIPMDGPMSFSTPHVSVQWALRFEFFTTRKNVDWTRYDHP 1431
KVQSDHHEVVADL QTSFLF +P+DGPMSFSTPHVSVQWALRFEF+TT KNVDWTRY+HP
Sbjct: 425 KVQSDHHEVVADLVQTSFLFSVPLDGPMSFSTPHVSVQWALRFEFYTTPKNVDWTRYEHP 484
Query: 1432 LLIEGRDKGEWVLPITVHVPPPRTQTAQTRNKKSLSLVPIWVRT 1563
LL+EGRDK EWVLPITVH PPP A TR+ K SL P+WVRT
Sbjct: 485 LLVEGRDKSEWVLPITVHAPPPGALAAHTRDAKHFSLEPLWVRT 528
>ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like protein [Medicago
truncatula] gi|355520854|gb|AET01308.1| Retrograde Golgi
transport protein RGP1-like protein [Medicago truncatula]
Length = 529
Score = 595 bits (1533), Expect = e-167
Identities = 295/514 (57%), Positives = 376/514 (73%), Gaps = 4/514 (0%)
Frame = +1
Query: 34 DVVPSVKLQLDKDIYRPGDSVAVTITIHNQECG-SLLVEKLSFEIKGIEKLDTQWFSTSK 210
++VP++KL+ DK +YRPGD V +TI I N G S L+E+LSFEI+GIEKLDTQWF+T K
Sbjct: 26 EIVPTLKLETDKQVYRPGDPVIITIQISNPSNGYSFLMERLSFEIRGIEKLDTQWFATQK 85
Query: 211 TPAPGSKHRRGEQAFLECSTPSFISNQILSSGGTKTYLLRAELPKIIPPTYRGTTIRYFY 390
P PGS+ RRGE F++ STP ++NQI+++G +K+Y++R LP IIPP+Y+G+ IRY Y
Sbjct: 86 -PLPGSRQRRGEHVFVDSSTPILVANQIINAGTSKSYVVRTMLPSIIPPSYKGSNIRYLY 144
Query: 391 YVRSTLAGRWLVRENGQFRRESLKDLIQLEERTPLQVWVSHNTSGLLVEEGLSDGILPAS 570
YV+S + G WL+ ENGQ R E D+ LE R PLQ+WV+ +SG L D I+P +
Sbjct: 145 YVKSAITGGWLILENGQSRTEPTNDVTDLEVRIPLQIWVNQKSSGF----PLDDDIVPLT 200
Query: 571 TLSMDIYWKEKDSDSEWARANETPEAIEEGYEXXXXXXXXXXXYNPTRGNIDHAQGSSLS 750
T+ +DI+WKE D D++W RAN+ + +E+GY+ YNP + N+ GSSLS
Sbjct: 201 TVQLDIFWKEMDGDADWVRANDIYDGVEDGYDSSRDDISSVSSYNPMKENMVRGFGSSLS 260
Query: 751 RLSSAPKFLSRDAPYLHGDRSSFSSYVALPQLSVDEFLYDSSGDLQSPKKKYPDLLSPSR 930
SS+ + L+R L G R+S SS +ALP+LSV E L D+ D S +K + ++SP+
Sbjct: 261 LRSSSARSLNR----LEGHRTSLSSNIALPRLSVAEVLSDTGADALSTQKSFT-MVSPTE 315
Query: 931 HGNHTNSLSNDDDTGVPSGPRT--IERVASEGFVRGRSYNIRLDGQVLLQFSPKNSDSTY 1104
S +DD GV S P +E ++SEGF+RGRSYNIRLD QVLL+FSPKNSDSTY
Sbjct: 316 QQKFGKQFSAEDDAGVSSSPEAGPVESLSSEGFIRGRSYNIRLDDQVLLKFSPKNSDSTY 375
Query: 1105 YFGDTIGGTLAFSHE-GARRCLEVAITLEITETIGQRIVHPSRRNSPTITKVQSDHHEVV 1281
YF D IGGTL F HE G RRCLE+++TLE +ETI +R VHPSRRNSPTITKVQSDHHEVV
Sbjct: 376 YFSDMIGGTLTFFHEQGGRRCLEISVTLETSETINRRFVHPSRRNSPTITKVQSDHHEVV 435
Query: 1282 ADLGQTSFLFCIPMDGPMSFSTPHVSVQWALRFEFFTTRKNVDWTRYDHPLLIEGRDKGE 1461
ADL QTSFLF +P+DGPM+FSTPHVSVQW LRFEF+TT K VDWT+Y+HPLLIEGR+K E
Sbjct: 436 ADLAQTSFLFSVPVDGPMTFSTPHVSVQWVLRFEFYTTPKFVDWTKYEHPLLIEGREKTE 495
Query: 1462 WVLPITVHVPPPRTQTAQTRNKKSLSLVPIWVRT 1563
WVLPITVH PPPRT T+ +RN+K SL P+WV T
Sbjct: 496 WVLPITVHAPPPRTPTSGSRNEKLFSLDPMWVHT 529