BLASTX nr result

ID: Coptis24_contig00009395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009395
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   3e-09
gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               60   1e-06
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    60   2e-06
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    59   2e-06
ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S...    59   3e-06

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
 Frame = +1

Query: 1030 MMTMNCRGMGTDSTILITKDLVREHQPDILCFSETKADKRRMEVVRKELKYQGNFILPAE 1209
            +++ NCRGMG+ S +   + L+    P I+  SETK     ME V+K+LK++    +  E
Sbjct: 4    ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 1210 G----TRGGLAVLWKEGIQLEVLGATQNHI 1287
            G     RGGLA+LW+  I+++V+  + NHI
Sbjct: 64   GECRKRRGGLAMLWRSEIKVQVMSMSSNHI 93


>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 27/74 (36%), Positives = 43/74 (58%)
 Frame = +1

Query: 1042 NCRGMGTDSTILITKDLVREHQPDILCFSETKADKRRMEVVRKELKYQGNFILPAEGTRG 1221
            NC+G+G D T+   K++ R++ PD++C SETK     +     EL +    ++P+ G  G
Sbjct: 60   NCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLSG 119

Query: 1222 GLAVLWKEGIQLEV 1263
            GL VLWK  + + V
Sbjct: 120  GLVVLWKPSVHISV 133


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1021 TAMM-MTMNCRGMGTDSTILITKDLVREHQPDILCFSETKADKRRMEVVRKELKYQGNFI 1197
            TAM+ ++ NCRG+G   T+L   ++ +  +PD +   ET     ++E ++ +L ++G F 
Sbjct: 305  TAMIGISWNCRGLGNPRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKLGFEGAFC 364

Query: 1198 LPAEGTRGGLAVLWKEGIQLEVLGATQNHI 1287
            +   G  GGLA LW++     +L  +Q+HI
Sbjct: 365  VDRVGRGGGLAFLWRKAGMFSLLXYSQSHI 394


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
            gi|241936261|gb|EES09406.1| hypothetical protein
            SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 25/82 (30%), Positives = 45/82 (54%)
 Frame = +1

Query: 1042 NCRGMGTDSTILITKDLVREHQPDILCFSETKADKRRMEVVRKELKYQGNFILPAEGTRG 1221
            NCRG+G  +T+   +DL +++ P ++   ET+  K R+E +R  L +  +F + + G  G
Sbjct: 7    NCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVNSSGRSG 66

Query: 1222 GLAVLWKEGIQLEVLGATQNHI 1287
            GL + W   + L +   +  HI
Sbjct: 67   GLGLFWNNDVLLSIQKYSNYHI 88


>ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
            gi|241941722|gb|EES14867.1| hypothetical protein
            SORBIDRAFT_07g013775 [Sorghum bicolor]
          Length = 589

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 27/77 (35%), Positives = 46/77 (59%)
 Frame = +1

Query: 1057 GTDSTILITKDLVREHQPDILCFSETKADKRRMEVVRKELKYQGNFILPAEGTRGGLAVL 1236
            G D  +    +  R   PD++  SETK+D++RM V+R +L ++   ++   G  GGLAVL
Sbjct: 258  GRDDIVRGLLNCQRSVSPDMMLLSETKSDEKRMRVLRMKLGFENMEVVDCVGKGGGLAVL 317

Query: 1237 WKEGIQLEVLGATQNHI 1287
            W+ G+ + +   ++NHI
Sbjct: 318  WRRGVDVVLRSKSKNHI 334


Top