BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009394
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...   118   1e-24
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...   118   1e-24
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   114   2e-23
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   114   2e-23
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   114   2e-23

>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score =  118 bits (295), Expect = 1e-24
 Identities = 67/191 (35%), Positives = 104/191 (54%)
 Frame = -2

Query: 610 NTNHTISWEKLCKPKSAGGLGFRKAKEMNQALISKHCWRLLQEEESIWSKTFTSIYKWHG 431
           N  H +SWEKL +PK AGGLGFR     N A+++K  WRL+Q  ES+ ++   + Y   G
Sbjct: 72  NKMHWLSWEKLTEPKWAGGLGFRDIHAFNLAMLAKQGWRLIQNPESLCAQVLKAKYYPSG 131

Query: 430 LEVVNKKRSAPCSYFWRGINRTMDGIRAGFIWKVGDGSTIDIYTHPWLSFMHKPVCLKDL 251
             + + K+ A  SY WR I R +  +R G IW+VG+G+ I+I++ PW+   H     + +
Sbjct: 132 -NIFSAKKCANMSYTWRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPSDH---TRRPI 187

Query: 250 VPPIYNTNPSITVVSQLIDQDHQSWNQNRLGELFPSPVVSSINQVVINPNIANKIIWSGS 71
            P   N    +T V +LID    SW+   L + F    V+ I  + ++  + + + W   
Sbjct: 188 TPRGRNL---VTRVEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMDDMLAWHYD 244

Query: 70  TKGIITVKSVY 38
            KG+ +VKS Y
Sbjct: 245 EKGLFSVKSAY 255


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  118 bits (295), Expect = 1e-24
 Identities = 67/191 (35%), Positives = 104/191 (54%)
 Frame = -2

Query: 610  NTNHTISWEKLCKPKSAGGLGFRKAKEMNQALISKHCWRLLQEEESIWSKTFTSIYKWHG 431
            N  H +SWEKL +PK AGGLGFR     N A+++K  WRL+Q  ES+ ++   + Y   G
Sbjct: 965  NKMHWLSWEKLTEPKWAGGLGFRDIHAFNLAMLAKQGWRLIQNPESLCAQVLKAKYYPSG 1024

Query: 430  LEVVNKKRSAPCSYFWRGINRTMDGIRAGFIWKVGDGSTIDIYTHPWLSFMHKPVCLKDL 251
              + + K+ A  SY WR I R +  +R G IW+VG+G+ I+I++ PW+   H     + +
Sbjct: 1025 -NIFSAKKCANMSYTWRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPSDH---TRRPI 1080

Query: 250  VPPIYNTNPSITVVSQLIDQDHQSWNQNRLGELFPSPVVSSINQVVINPNIANKIIWSGS 71
             P   N    +T V +LID    SW+   L + F    V+ I  + ++  + + + W   
Sbjct: 1081 TPRGRNL---VTRVEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMDDMLAWHYD 1137

Query: 70   TKGIITVKSVY 38
             KG+ +VKS Y
Sbjct: 1138 EKGLFSVKSAY 1148


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  114 bits (284), Expect = 2e-23
 Identities = 63/191 (32%), Positives = 104/191 (54%)
 Frame = -2

Query: 610  NTNHTISWEKLCKPKSAGGLGFRKAKEMNQALISKHCWRLLQEEESIWSKTFTSIYKWHG 431
            N  H +SW KL  PK+ GGLGFR     N A+++K  WRL+Q+ +S+ S+   + Y   G
Sbjct: 1090 NKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLG 1149

Query: 430  LEVVNKKRSAPCSYFWRGINRTMDGIRAGFIWKVGDGSTIDIYTHPWLSFMHKPVCLKDL 251
             +    K+++  SY WR I + +  ++ G IW+VGDGS I+I+  PW+    +    K +
Sbjct: 1150 -DCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIP---RGWSRKPM 1205

Query: 250  VPPIYNTNPSITVVSQLIDQDHQSWNQNRLGELFPSPVVSSINQVVINPNIANKIIWSGS 71
             P   N    +T V +LID    +W+++ L + F    V++I  + ++  + + + W   
Sbjct: 1206 TPRGANL---VTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFD 1262

Query: 70   TKGIITVKSVY 38
             +G  TVKS Y
Sbjct: 1263 ARGCFTVKSAY 1273


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  114 bits (284), Expect = 2e-23
 Identities = 63/191 (32%), Positives = 104/191 (54%)
 Frame = -2

Query: 610  NTNHTISWEKLCKPKSAGGLGFRKAKEMNQALISKHCWRLLQEEESIWSKTFTSIYKWHG 431
            N  H +SW KL  PK+ GGLGFR     N A+++K  WRL+Q+ +S+ S+   + Y   G
Sbjct: 1035 NKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLG 1094

Query: 430  LEVVNKKRSAPCSYFWRGINRTMDGIRAGFIWKVGDGSTIDIYTHPWLSFMHKPVCLKDL 251
             +    K+++  SY WR I + +  ++ G IW+VGDGS I+I+  PW+    +    K +
Sbjct: 1095 -DCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIP---RGWSRKPM 1150

Query: 250  VPPIYNTNPSITVVSQLIDQDHQSWNQNRLGELFPSPVVSSINQVVINPNIANKIIWSGS 71
             P   N    +T V +LID    +W+++ L + F    V++I  + ++  + + + W   
Sbjct: 1151 TPRGANL---VTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFD 1207

Query: 70   TKGIITVKSVY 38
             +G  TVKS Y
Sbjct: 1208 ARGCFTVKSAY 1218


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  114 bits (284), Expect = 2e-23
 Identities = 63/191 (32%), Positives = 104/191 (54%)
 Frame = -2

Query: 610  NTNHTISWEKLCKPKSAGGLGFRKAKEMNQALISKHCWRLLQEEESIWSKTFTSIYKWHG 431
            N  H +SW KL  PK+ GGLGFR     N A+++K  WRL+Q+ +S+ S+   + Y   G
Sbjct: 1031 NKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLG 1090

Query: 430  LEVVNKKRSAPCSYFWRGINRTMDGIRAGFIWKVGDGSTIDIYTHPWLSFMHKPVCLKDL 251
             +    K+++  SY WR I + +  ++ G IW+VGDGS I+I+  PW+    +    K +
Sbjct: 1091 -DCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIP---RGWSRKPM 1146

Query: 250  VPPIYNTNPSITVVSQLIDQDHQSWNQNRLGELFPSPVVSSINQVVINPNIANKIIWSGS 71
             P   N    +T V +LID    +W+++ L + F    V++I  + ++  + + + W   
Sbjct: 1147 TPRGANL---VTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFD 1203

Query: 70   TKGIITVKSVY 38
             +G  TVKS Y
Sbjct: 1204 ARGCFTVKSAY 1214