BLASTX nr result

ID: Coptis24_contig00009391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009391
         (1645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267...   513   e-143
emb|CBI28632.3| unnamed protein product [Vitis vinifera]              501   e-139
ref|XP_003631852.1| PREDICTED: uncharacterized protein LOC100267...   491   e-136
ref|XP_002528504.1| protein with unknown function [Ricinus commu...   491   e-136
ref|XP_002305255.1| predicted protein [Populus trichocarpa] gi|2...   489   e-135

>ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267328 isoform 2 [Vitis
            vinifera]
          Length = 407

 Score =  513 bits (1322), Expect = e-143
 Identities = 268/416 (64%), Positives = 305/416 (73%), Gaps = 6/416 (1%)
 Frame = -3

Query: 1412 MEVQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 1233
            ME+QTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1    MEIQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 1232 GPSTAFCLLYKFFTMKLTVKQMHGLLKHADSPYIRAVGFLYLRYAADPKTLWGWFEPYVK 1053
            GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRAVGFLYLRYA DPKTLW WFEPYVK
Sbjct: 61   GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAGDPKTLWNWFEPYVK 120

Query: 1052 DDEEFAPGSNGRLTTMGVYVRDLLLGQYYFDTLFPRTPVPVMRQIAANLERMKLPSTHSG 873
            D+EEF+PGS GR+TTMG YVRDLLLGQYYFDTLFPR PVP+MRQI ANLE+MKLPS H+G
Sbjct: 121  DEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAG 180

Query: 872  VTGENSRHGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL---PPLHERDNS 702
            VTG+ +RHGS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL   PP ++R++S
Sbjct: 181  VTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSS 240

Query: 701  DDIQKSP-SKYHXXXXXXXXXXXXXXXXXXXXXXXXXXXEIENDRCRDRKSDYDGRATHR 525
            DD+++SP S+                             + E +R RDR+ DYD R+ + 
Sbjct: 241  DDLRRSPSSRRSQSRELDKDRDRDRDRDRDRDKDKDRDRDRERERDRDRRHDYDRRSKYT 300

Query: 524  NRGXXXXXXXXXXXXXRHDEKHXXXXXXXXXXXXXXXXXXXXXXXXXXSMHAYSEHLPSP 345
             R              R++ +                           + + + +H  SP
Sbjct: 301  ERESRRDYDRSSRDGSRYNRE---------TSSRRSRSRSRSRSQSLQARNDHIDHRSSP 351

Query: 344  QKDVSKDRTSVSSNLAKLRDLYGDAGNSKGDVDFER-SRKDSSSEEVIRLGG-SWK 183
              D SK++TS S+NLAKLRDLYGD G+ KG    ER SR+D+S EEVIRLGG SWK
Sbjct: 352  LADGSKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 407


>emb|CBI28632.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  501 bits (1290), Expect = e-139
 Identities = 265/415 (63%), Positives = 295/415 (71%), Gaps = 5/415 (1%)
 Frame = -3

Query: 1412 MEVQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 1233
            ME+QTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1    MEIQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 1232 GPSTAFCLLYKFFTMKLTVKQMHGLLKHADSPYIRAVGFLYLRYAADPKTLWGWFEPYVK 1053
            GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRAVGFLYLRYA DPKTLW WFEPYVK
Sbjct: 61   GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAGDPKTLWNWFEPYVK 120

Query: 1052 DDEEFAPGSNGRLTTMGVYVRDLLLGQYYFDTLFPRTPVPVMRQIAANLERMKLPSTHSG 873
            D+EEF+PGS GR+TTMG YVRDLLLGQYYFDTLFPR PVP+MRQI ANLE+MKLPS H+G
Sbjct: 121  DEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAG 180

Query: 872  VTGENSRHGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL---PPLHERDNS 702
            VTG+ +RHGS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL   PP ++R++S
Sbjct: 181  VTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSS 240

Query: 701  DDIQKSPSKYHXXXXXXXXXXXXXXXXXXXXXXXXXXXEIENDRCRDRKSDYDGRATHRN 522
            DD+++SPS                               ++ DR RD+  D D R   R+
Sbjct: 241  DDLRRSPSS---------------RRSQSRELDKDRDRAMDRDRDRDKDRDRD-RDRDRD 284

Query: 521  RGXXXXXXXXXXXXXRHDEKHXXXXXXXXXXXXXXXXXXXXXXXXXXSMHAYSEHLPSPQ 342
            R                D +H                                    S  
Sbjct: 285  RDKDKDRDRDRERERDRDRRHDYDRRSKYTERESRRDYDR----------------SSRD 328

Query: 341  KDVSKDRTSVSSNLAKLRDLYGDAGNSKGDVDFER-SRKDSSSEEVIRLGG-SWK 183
             + SK++TS S+NLAKLRDLYGD G+ KG    ER SR+D+S EEVIRLGG SWK
Sbjct: 329  GNGSKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 383


>ref|XP_003631852.1| PREDICTED: uncharacterized protein LOC100267328 isoform 3 [Vitis
            vinifera]
          Length = 399

 Score =  491 bits (1265), Expect = e-136
 Identities = 260/416 (62%), Positives = 297/416 (71%), Gaps = 6/416 (1%)
 Frame = -3

Query: 1412 MEVQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 1233
            ME+QTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1    MEIQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 1232 GPSTAFCLLYKFFTMKLTVKQMHGLLKHADSPYIRAVGFLYLRYAADPKTLWGWFEPYVK 1053
            GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRAVGFLYLRYA DPKTLW WFEPYVK
Sbjct: 61   GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAGDPKTLWNWFEPYVK 120

Query: 1052 DDEEFAPGSNGRLTTMGVYVRDLLLGQYYFDTLFPRTPVPVMRQIAANLERMKLPSTHSG 873
            D+EEF+PGS GR+TTMG Y        YYFDTLFPR PVP+MRQI ANLE+MKLPS H+G
Sbjct: 121  DEEEFSPGSTGRMTTMGAY--------YYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAG 172

Query: 872  VTGENSRHGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL---PPLHERDNS 702
            VTG+ +RHGS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL   PP ++R++S
Sbjct: 173  VTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSS 232

Query: 701  DDIQKSP-SKYHXXXXXXXXXXXXXXXXXXXXXXXXXXXEIENDRCRDRKSDYDGRATHR 525
            DD+++SP S+                             + E +R RDR+ DYD R+ + 
Sbjct: 233  DDLRRSPSSRRSQSRELDKDRDRDRDRDRDRDKDKDRDRDRERERDRDRRHDYDRRSKYT 292

Query: 524  NRGXXXXXXXXXXXXXRHDEKHXXXXXXXXXXXXXXXXXXXXXXXXXXSMHAYSEHLPSP 345
             R              R++ +                           + + + +H  SP
Sbjct: 293  ERESRRDYDRSSRDGSRYNRE---------TSSRRSRSRSRSRSQSLQARNDHIDHRSSP 343

Query: 344  QKDVSKDRTSVSSNLAKLRDLYGDAGNSKGDVDFER-SRKDSSSEEVIRLGG-SWK 183
              D SK++TS S+NLAKLRDLYGD G+ KG    ER SR+D+S EEVIRLGG SWK
Sbjct: 344  LADGSKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 399


>ref|XP_002528504.1| protein with unknown function [Ricinus communis]
            gi|223532064|gb|EEF33873.1| protein with unknown function
            [Ricinus communis]
          Length = 418

 Score =  491 bits (1263), Expect = e-136
 Identities = 268/425 (63%), Positives = 297/425 (69%), Gaps = 15/425 (3%)
 Frame = -3

Query: 1412 MEVQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 1233
            ME+QTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
Sbjct: 1    MEIQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 1232 GPSTAFCLLYKFFTMKLTVKQMHGLLKHADSPYIRAVGFLYLRYAADPKTLWGWFEPYVK 1053
            GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRYAAD KTLW W EPY+K
Sbjct: 61   GPSTAFCLLYKFFTMKLTVKQMHGLLKHKDSPYIRAIGFLYLRYAADAKTLWNWCEPYIK 120

Query: 1052 DDEEFAPGSNGRLTTMGVYVRDLLLGQYYFDTLFPRTPVPVMRQIAANLERMKLPSTHSG 873
            DDEEF+PGSNGR TTMGVYVRDLLLGQYYFDTLFPR PVPVMRQI +NLE+MKLP+  SG
Sbjct: 121  DDEEFSPGSNGRNTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRQIVSNLEKMKLPTKPSG 180

Query: 872  VTGENSRHGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPP---LHERDNS 702
             TG+  RHGS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRT+PP    +ER NS
Sbjct: 181  ATGDAVRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTIPPPPSSYER-NS 239

Query: 701  DDIQKSP-------SKYHXXXXXXXXXXXXXXXXXXXXXXXXXXXEIENDRCRDRKSDYD 543
            DD ++SP        +Y                            +   DR R+R+ DYD
Sbjct: 240  DDPRRSPRSRRSQSREYSDKEYSDRDRDRDRDQDRNRERERDREHDRGRDRDRERRYDYD 299

Query: 542  GRATHRNRGXXXXXXXXXXXXXRHDEKHXXXXXXXXXXXXXXXXXXXXXXXXXXSMHA-- 369
             R+ +  R               HD +H                             A  
Sbjct: 300  RRSRYSER-----DGRRDYERSSHDSRHYRESSSHRSRSRSRSRSRSRSRSRSIQAGASP 354

Query: 368  YSEHLPSPQKDVSKD-RTSVSSNLAKLRDLYGDAGNSKGDVDFERS-RKDSSSEEVIRLG 195
            +  H  SP +D  K+ RTS SSNLAKL+DLYGD  + +GD   ER+ R+D SSEE+IRLG
Sbjct: 355  FDRH-SSPYRDGGKEKRTSASSNLAKLKDLYGDLSDQRGDGGVERAPRRDDSSEEIIRLG 413

Query: 194  GS-WK 183
            GS WK
Sbjct: 414  GSTWK 418


>ref|XP_002305255.1| predicted protein [Populus trichocarpa] gi|222848219|gb|EEE85766.1|
            predicted protein [Populus trichocarpa]
          Length = 397

 Score =  489 bits (1258), Expect = e-135
 Identities = 264/416 (63%), Positives = 290/416 (69%), Gaps = 6/416 (1%)
 Frame = -3

Query: 1412 MEVQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 1233
            MEVQT+GKPIDSL EKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVD+VEPWMTGNCR
Sbjct: 1    MEVQTNGKPIDSLFEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDNVEPWMTGNCR 60

Query: 1232 GPSTAFCLLYKFFTMKLTVKQMHGLLKHADSPYIRAVGFLYLRYAADPKTLWGWFEPYVK 1053
            GPST+FCLLYKFFTMKLTVKQMHGLLKH DSPYIRAVGFLYLRYA DPKTLW WFEPY+K
Sbjct: 61   GPSTSFCLLYKFFTMKLTVKQMHGLLKHKDSPYIRAVGFLYLRYAGDPKTLWNWFEPYIK 120

Query: 1052 DDEEFAPGSNGRLTTMGVYVRDLLLGQYYFDTLFPRTPVPVMRQIAANLERMKLPSTHSG 873
            DDEEF+PGS+GR TT+G+YVRDLLLGQYYFDTLFPR PVPV+RQI ANLE MKLP+  SG
Sbjct: 121  DDEEFSPGSSGRKTTIGIYVRDLLLGQYYFDTLFPRIPVPVLRQITANLEMMKLPTKISG 180

Query: 872  VTGENSRHGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPLHERDNSDDI 693
             TG+ +RHGS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPP      SDD 
Sbjct: 181  STGDGNRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPSYDRTSDDP 240

Query: 692  QKSPSKYHXXXXXXXXXXXXXXXXXXXXXXXXXXXEIENDRCRDRKSDYDGRATHRNRGX 513
            +   S+                               E DR RDR  D   R   R+RG 
Sbjct: 241  RSHRSQSREYSDKEYSDRDRDQDRGRERDRDRDR---ERDRVRDRDHD---RERDRDRG- 293

Query: 512  XXXXXXXXXXXXRHDEKHXXXXXXXXXXXXXXXXXXXXXXXXXXSMHA----YSEHLPSP 345
                          D K                           S+ A    + +H P+P
Sbjct: 294  -----------RDSDRKQERERGRDRRSDYDRSSSRSRSRSRSQSLQAGTSPFDQH-PTP 341

Query: 344  QKDVSKDRTSVSSNLAKLRDLYGDAGNSKGDVDFERS-RKDSSSEEVIRLGGS-WK 183
            Q+D SKDRTS SSNLAKL+DLYGD G+ KGD   ER  R+D+  EEV RLGGS W+
Sbjct: 342  QRDGSKDRTSASSNLAKLKDLYGDLGDQKGDAGLERGPRRDNDGEEVFRLGGSTWR 397


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