BLASTX nr result

ID: Coptis24_contig00009377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009377
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26223.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [V...    77   1e-12
ref|XP_002315783.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...    75   7e-12
gb|AAC26247.2| Arabidopsis thaliana CLC-d chloride channel prote...    74   9e-12
ref|NP_197996.1| chloride channel protein CLC-d [Arabidopsis tha...    74   9e-12

>emb|CBI26223.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = +2

Query: 2   SFGLPLLRKCSPCPEANANSDIECPRPPGLYGNYVNF 112
           SFGLPLLRKCSPCPE   NS IECPRPPG+YGNYVNF
Sbjct: 373 SFGLPLLRKCSPCPEVELNSGIECPRPPGMYGNYVNF 409


>ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [Vitis vinifera]
           gi|301318138|gb|ADK66984.1| chloride channel ClC6 [Vitis
           vinifera]
          Length = 771

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = +2

Query: 2   SFGLPLLRKCSPCPEANANSDIECPRPPGLYGNYVNF 112
           SFGLPLLRKCSPCPE   NS IECPRPPG+YGNYVNF
Sbjct: 373 SFGLPLLRKCSPCPEVELNSGIECPRPPGMYGNYVNF 409


>ref|XP_002315783.1| Cl-channel clc-7 [Populus trichocarpa] gi|222864823|gb|EEF01954.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 752

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = +2

Query: 2   SFGLPLLRKCSPCPEANANSDIECPRPPGLYGNYVNF 112
           SFGLPLLRKC+PCPE++ +S IECPRPPG+YGNYVNF
Sbjct: 373 SFGLPLLRKCNPCPESDPDSGIECPRPPGMYGNYVNF 409


>gb|AAC26247.2| Arabidopsis thaliana CLC-d chloride channel protein (GB:Z71450)
           [Arabidopsis thaliana]
          Length = 772

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 2   SFGLPLLRKCSPCPEANANSDIECPRPPGLYGNYVNF 112
           SFGLPLLRKCSPCPE+  +S IECPRPPG+YGNYVNF
Sbjct: 375 SFGLPLLRKCSPCPESVPDSGIECPRPPGMYGNYVNF 411


>ref|NP_197996.1| chloride channel protein CLC-d [Arabidopsis thaliana]
           gi|41688458|sp|P92943.2|CLCD_ARATH RecName:
           Full=Chloride channel protein CLC-d; Short=AtCLC-d;
           AltName: Full=CBS domain-containing protein CBSCLC2
           gi|332006157|gb|AED93540.1| chloride channel protein
           CLC-d [Arabidopsis thaliana]
          Length = 792

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 2   SFGLPLLRKCSPCPEANANSDIECPRPPGLYGNYVNF 112
           SFGLPLLRKCSPCPE+  +S IECPRPPG+YGNYVNF
Sbjct: 375 SFGLPLLRKCSPCPESVPDSGIECPRPPGMYGNYVNF 411


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