BLASTX nr result

ID: Coptis24_contig00009369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009369
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523654.1| conserved hypothetical protein [Ricinus comm...   399   e-109
ref|XP_003621678.1| hypothetical protein MTR_7g021620 [Medicago ...   392   e-106
ref|XP_002276113.1| PREDICTED: uncharacterized protein LOC100252...   385   e-104
ref|XP_004145125.1| PREDICTED: uncharacterized protein LOC101217...   385   e-104
ref|XP_003608510.1| hypothetical protein MTR_4g096890 [Medicago ...   383   e-104

>ref|XP_002523654.1| conserved hypothetical protein [Ricinus communis]
            gi|223537106|gb|EEF38740.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 321

 Score =  399 bits (1024), Expect = e-109
 Identities = 204/321 (63%), Positives = 243/321 (75%), Gaps = 1/321 (0%)
 Frame = +2

Query: 107  MDLAAEDLQFLTLKDVLKESVNIPKLSTKTFALITLTLIFPLSFAILAHSLFTHPLLTQI 286
            MDLA E+LQFLT+ D+L+ES++IPK S K F LITLTLIFPLSFAILAHSLFTHPLL+Q+
Sbjct: 1    MDLAPEELQFLTIPDILRESISIPKRSPKAFYLITLTLIFPLSFAILAHSLFTHPLLSQL 60

Query: 287  ESRPTSDPN-THSEWAHLFLIQFSYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFTSTLS 463
            E  P++DP+ T  EW  L + QF YLIFLFAFSLLSTAAVVFTVASLYTSKPVSF+ST+S
Sbjct: 61   EDHPSADPSQTRHEWTLLLIFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSSTIS 120

Query: 464  AIPRVFKRLLITFLFVSALMIVYNLVFLSCLVALLISIHTNNPILFVFSFIALLVLFVFV 643
            AIP+VFKRL +TFL+VS LM++YN VFL  LV L+I+I   NP+L +FS + + +LF+ V
Sbjct: 121  AIPKVFKRLFVTFLWVSLLMVLYNSVFLVFLVILVIAIDAQNPLLVIFSLLVIFLLFLVV 180

Query: 644  HVYITALWHLASVVSVLEPVCGFEAMKKSRDLLKGKTKMAMVFVFGYLMLCXXXXXXXXX 823
            HVYITALWHLASVVSVLEP+ G  AMKKS +LLKG+ ++A++ VFGYL +C         
Sbjct: 181  HVYITALWHLASVVSVLEPLYGVAAMKKSYELLKGRIRVAVILVFGYLAICGVIGGIFGS 240

Query: 824  XXXXXXEDYGVMIRAXXXXXXXXXXXXXXXXXXXXQSVFYYVCKSYHHQGIDKSVLYEHL 1003
                  + YGV  R                     QSVFYYVCKSYHHQGIDK  L+EHL
Sbjct: 241  VVVHGGDSYGVFTRIVVGGFLVGVLVIINLVGLLVQSVFYYVCKSYHHQGIDKIALHEHL 300

Query: 1004 GGYLGEYVPLKSSIQMENLEV 1066
            GGYLGEYVPLKS+IQMENL+V
Sbjct: 301  GGYLGEYVPLKSNIQMENLDV 321


>ref|XP_003621678.1| hypothetical protein MTR_7g021620 [Medicago truncatula]
            gi|124360801|gb|ABN08773.1| hypothetical protein
            MtrDRAFT_AC160516g6v2 [Medicago truncatula]
            gi|217074148|gb|ACJ85434.1| unknown [Medicago truncatula]
            gi|355496693|gb|AES77896.1| hypothetical protein
            MTR_7g021620 [Medicago truncatula]
            gi|388515831|gb|AFK45977.1| unknown [Medicago truncatula]
          Length = 320

 Score =  392 bits (1006), Expect = e-106
 Identities = 200/320 (62%), Positives = 241/320 (75%)
 Frame = +2

Query: 107  MDLAAEDLQFLTLKDVLKESVNIPKLSTKTFALITLTLIFPLSFAILAHSLFTHPLLTQI 286
            MDLA E+LQFL + ++LKES++IPK+S KTF LITLTLIFPLSFAILAHSLFTHPL++Q+
Sbjct: 1    MDLAQEELQFLNIPNILKESISIPKISPKTFYLITLTLIFPLSFAILAHSLFTHPLISQL 60

Query: 287  ESRPTSDPNTHSEWAHLFLIQFSYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFTSTLSA 466
            +S  T    T  +W  L +IQF YLIFLFAFSLLSTAAVVFTVASLYTSKPVSF++T+SA
Sbjct: 61   QSPFTDPSQTSHDWTLLLIIQFFYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSNTISA 120

Query: 467  IPRVFKRLLITFLFVSALMIVYNLVFLSCLVALLISIHTNNPILFVFSFIALLVLFVFVH 646
            IP+VFKRL ITFL+V+ LMI YN +F+ CLV ++++I T+N +L  FS + + VLF+ VH
Sbjct: 121  IPKVFKRLFITFLWVTLLMICYNFLFVLCLVLMVVAIDTDNSVLLFFSVVFIFVLFLVVH 180

Query: 647  VYITALWHLASVVSVLEPVCGFEAMKKSRDLLKGKTKMAMVFVFGYLMLCXXXXXXXXXX 826
            VYITALWHLASVVSVLEP+ GF AMKKS +LLKG+ + A + V GYL++C          
Sbjct: 181  VYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYAALLVCGYLLICAVISGMFSVV 240

Query: 827  XXXXXEDYGVMIRAXXXXXXXXXXXXXXXXXXXXQSVFYYVCKSYHHQGIDKSVLYEHLG 1006
                 + YGV  R                     QSVFYYVCKSYHHQGIDKS L++HLG
Sbjct: 241  VVHGGDGYGVFSRIVIGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQGIDKSALHDHLG 300

Query: 1007 GYLGEYVPLKSSIQMENLEV 1066
            GYLGEYVPLKSSIQMENL+V
Sbjct: 301  GYLGEYVPLKSSIQMENLDV 320


>ref|XP_002276113.1| PREDICTED: uncharacterized protein LOC100252459 isoform 1 [Vitis
            vinifera] gi|359473069|ref|XP_003631241.1| PREDICTED:
            uncharacterized protein LOC100252459 isoform 2 [Vitis
            vinifera] gi|297737990|emb|CBI27191.3| unnamed protein
            product [Vitis vinifera]
          Length = 318

 Score =  385 bits (989), Expect = e-104
 Identities = 205/321 (63%), Positives = 235/321 (73%), Gaps = 1/321 (0%)
 Frame = +2

Query: 107  MDLAAEDLQFLTLKDVLKESVNIPKLSTKTFALITLTLIFPLSFAILAHSLFTHPLLTQI 286
            MDLA E+LQFL++ D+LKES +IPK S K F LITLTLIFPLSFAILAHSLFTHPL +QI
Sbjct: 1    MDLANEELQFLSIPDILKESTSIPKQSPKAFYLITLTLIFPLSFAILAHSLFTHPLYSQI 60

Query: 287  ESRPTSDP-NTHSEWAHLFLIQFSYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFTSTLS 463
            ++   SDP +TH +W  L   Q  YLIFLFA SLLSTAAVVFTVASLYTSKPVSF ST++
Sbjct: 61   QA---SDPRHTHHQWTLLLTFQLCYLIFLFALSLLSTAAVVFTVASLYTSKPVSFASTMA 117

Query: 464  AIPRVFKRLLITFLFVSALMIVYNLVFLSCLVALLISIHTNNPILFVFSFIALLVLFVFV 643
            AIPRVFKRL ITF++VS LMI Y  VF + +V L+I++   +P+LF F+ + + +LFV V
Sbjct: 118  AIPRVFKRLFITFIWVSLLMITYYAVFSAAVVLLIIAVDVQSPLLFFFALVVIFLLFVVV 177

Query: 644  HVYITALWHLASVVSVLEPVCGFEAMKKSRDLLKGKTKMAMVFVFGYLMLCXXXXXXXXX 823
            HVYITALWHLASVVSVLEPV GF AMKKS +LLKGKT+MA   VF YL++C         
Sbjct: 178  HVYITALWHLASVVSVLEPVYGFAAMKKSYELLKGKTRMAAALVFVYLVICGVISGVFGA 237

Query: 824  XXXXXXEDYGVMIRAXXXXXXXXXXXXXXXXXXXXQSVFYYVCKSYHHQGIDKSVLYEHL 1003
                  E YGV  R                     QSVFYYVCKSYHHQGIDKS L +HL
Sbjct: 238  VVVHGGEMYGVFFRIVVGGFLVGVLVIVNLIGLLVQSVFYYVCKSYHHQGIDKSALLDHL 297

Query: 1004 GGYLGEYVPLKSSIQMENLEV 1066
            GGYLGEYVPLKSSIQMENLEV
Sbjct: 298  GGYLGEYVPLKSSIQMENLEV 318


>ref|XP_004145125.1| PREDICTED: uncharacterized protein LOC101217213 [Cucumis sativus]
            gi|449473661|ref|XP_004153945.1| PREDICTED:
            uncharacterized protein LOC101206734 [Cucumis sativus]
          Length = 320

 Score =  385 bits (988), Expect = e-104
 Identities = 201/320 (62%), Positives = 237/320 (74%), Gaps = 1/320 (0%)
 Frame = +2

Query: 107  MDLAAEDLQFLTLKDVLKESVNIPKLSTKTFALITLTLIFPLSFAILAHSLFTHPLLTQI 286
            MDLA E+LQFLT+  +L+ES+ IPK S KTF LITLTLIFPLSFAILAHSLFTHPLL Q+
Sbjct: 1    MDLAPEELQFLTIPHILRESILIPKRSPKTFYLITLTLIFPLSFAILAHSLFTHPLLVQL 60

Query: 287  ESRPTSDP-NTHSEWAHLFLIQFSYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFTSTLS 463
            ++ P +DP  T   W  L   QF YLIFLFAFSLLSTAAVVFTVASLYTSKPVS++STLS
Sbjct: 61   QN-PFADPIQTRHRWTKLLSFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSYSSTLS 119

Query: 464  AIPRVFKRLLITFLFVSALMIVYNLVFLSCLVALLISIHTNNPILFVFSFIALLVLFVFV 643
            AIP+VFKRL +TFL+VS LMI+YN +FL+ LV L+++I T N  LF FS I + +LF+ V
Sbjct: 120  AIPKVFKRLFVTFLWVSLLMIIYNFIFLAFLVLLVLAIDTQNYFLFFFSVIVIFILFLVV 179

Query: 644  HVYITALWHLASVVSVLEPVCGFEAMKKSRDLLKGKTKMAMVFVFGYLMLCXXXXXXXXX 823
            HVYITALWHLASVVSVLEP+ GF AM+KS +LLKGKT+ A V VF YL +C         
Sbjct: 180  HVYITALWHLASVVSVLEPIYGFSAMRKSYELLKGKTRFAGVLVFAYLAICATISVIFGA 239

Query: 824  XXXXXXEDYGVMIRAXXXXXXXXXXXXXXXXXXXXQSVFYYVCKSYHHQGIDKSVLYEHL 1003
                  + YGV +R                     QSVFYYVCKS+HHQGIDK  L++HL
Sbjct: 240  VVVHGGDGYGVFVRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHHQGIDKLALHDHL 299

Query: 1004 GGYLGEYVPLKSSIQMENLE 1063
            GGYLGEYVPLKSSIQM++L+
Sbjct: 300  GGYLGEYVPLKSSIQMDSLD 319


>ref|XP_003608510.1| hypothetical protein MTR_4g096890 [Medicago truncatula]
            gi|355509565|gb|AES90707.1| hypothetical protein
            MTR_4g096890 [Medicago truncatula]
          Length = 320

 Score =  383 bits (983), Expect = e-104
 Identities = 198/320 (61%), Positives = 234/320 (73%)
 Frame = +2

Query: 107  MDLAAEDLQFLTLKDVLKESVNIPKLSTKTFALITLTLIFPLSFAILAHSLFTHPLLTQI 286
            MDLA E+LQFL + ++LKES++IPK+S KTF LITL LIFPLSFAILAHSLFTHPL++ I
Sbjct: 1    MDLAPEELQFLNIPNILKESISIPKISPKTFYLITLILIFPLSFAILAHSLFTHPLISHI 60

Query: 287  ESRPTSDPNTHSEWAHLFLIQFSYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFTSTLSA 466
            ES  T    T  +W  L +IQF YLIFLFAFSLLSTAAVVFTVASLYTSKPVSF++T+SA
Sbjct: 61   ESPFTDPAQTSHDWTLLLIIQFFYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSNTISA 120

Query: 467  IPRVFKRLLITFLFVSALMIVYNLVFLSCLVALLISIHTNNPILFVFSFIALLVLFVFVH 646
            IP VFKRL ITFL+V+ LM  YN VF+ CLV ++I++ T+N +L  FS + + VLF+ VH
Sbjct: 121  IPNVFKRLFITFLWVTLLMFCYNFVFILCLVLMVIAVDTDNSVLLFFSVVLIFVLFLVVH 180

Query: 647  VYITALWHLASVVSVLEPVCGFEAMKKSRDLLKGKTKMAMVFVFGYLMLCXXXXXXXXXX 826
            VYITALWHLASVVSVLEP+ GF AMKKS +LLKG+ + A + V GYL LC          
Sbjct: 181  VYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYASLLVCGYLFLCAVISGMFSVI 240

Query: 827  XXXXXEDYGVMIRAXXXXXXXXXXXXXXXXXXXXQSVFYYVCKSYHHQGIDKSVLYEHLG 1006
                 + Y V  R                     QSVFYYVCKSYHHQ IDKS L++HLG
Sbjct: 241  VVHGGDGYDVFSRIFIGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQEIDKSALHDHLG 300

Query: 1007 GYLGEYVPLKSSIQMENLEV 1066
            GYLGEYVPLKSSIQMENL++
Sbjct: 301  GYLGEYVPLKSSIQMENLDI 320


Top