BLASTX nr result

ID: Coptis24_contig00009360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009360
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282374.1| PREDICTED: uncharacterized protein At2g39795...   240   5e-61
ref|XP_004138451.1| PREDICTED: uncharacterized protein At2g39795...   228   2e-57
ref|XP_002316261.1| predicted protein [Populus trichocarpa] gi|2...   219   8e-55
ref|NP_001240899.1| uncharacterized protein LOC100818815 [Glycin...   214   4e-53
ref|XP_002308182.1| predicted protein [Populus trichocarpa] gi|2...   212   2e-52

>ref|XP_002282374.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial [Vitis
            vinifera] gi|296086172|emb|CBI31613.3| unnamed protein
            product [Vitis vinifera]
          Length = 253

 Score =  240 bits (612), Expect = 5e-61
 Identities = 137/257 (53%), Positives = 174/257 (67%), Gaps = 3/257 (1%)
 Frame = -1

Query: 1044 MAFTNILRRTCSSVVPLTRAIRTQRNYSSAIFTHLRNNTNKSVSQELLRRASVPALHF-S 868
            MA T ILRR+ SSV+PL   +  + ++ SA+FT L +    S+  +   R     LHF S
Sbjct: 1    MAVTTILRRSISSVMPLAVRVVQRNHHHSALFTALYHG---SLFHKPSLRPFASTLHFYS 57

Query: 867  SLAKTTNS--NLVQILESEIGCAEEEDDSNQVEGLPNGFPFKIRDEPGMKTIILEKEYEG 694
            S AK  +S  NL+++LESEI  +EE DD +  E  P+GFPF+I+D PG +TI L +EY+G
Sbjct: 58   SSAKRPSSDDNLLRVLESEIKYSEESDDHDGNEEAPDGFPFEIQDNPGQQTISLAREYQG 117

Query: 693  EVIKVEVHTPEIYXXXXXXXXXXXXXXXXXGHASIALVVKVTKGRNGTSLEFGCTADPDE 514
            EVIKVEVH P++                    +SI LVV V+K +NG  LEFGCTA  DE
Sbjct: 118  EVIKVEVHMPDLVTGEGDDDNNDDDNEKGN-QSSIPLVVSVSK-KNGPFLEFGCTAFADE 175

Query: 513  ITIDSLIVKDHDTSEDDLAYGGPDFQDLDENLQKGFYKYLEVRGIKPSTTNFLYEYMMKK 334
            I IDSL VK+ + SE+ +AY GPDF DLDENLQK F+KYLE+RGIKPSTTNFL+EYM+ K
Sbjct: 176  IAIDSLSVKNPEISEEQIAYEGPDFTDLDENLQKAFHKYLEIRGIKPSTTNFLHEYMINK 235

Query: 333  DGKEYLRWLKNVKKFVE 283
            D +EYL WLKN+KKFVE
Sbjct: 236  DSREYLLWLKNLKKFVE 252


>ref|XP_004138451.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial-like
            [Cucumis sativus] gi|449495281|ref|XP_004159787.1|
            PREDICTED: uncharacterized protein At2g39795,
            mitochondrial-like [Cucumis sativus]
          Length = 253

 Score =  228 bits (581), Expect = 2e-57
 Identities = 127/260 (48%), Positives = 175/260 (67%), Gaps = 6/260 (2%)
 Frame = -1

Query: 1044 MAFTNILRRTCSSVVPLT-RAIRTQRNYSSAIFTHLRNNTNKSVSQELLRRASVPALHFS 868
            MA T+ILR++ SS+ PL  R +R QR Y+++IF     NT++      L   SV +    
Sbjct: 1    MALTSILRKSASSLCPLAGRLVRGQRLYATSIFNSF--NTHRP-----LFPPSVTSFRVF 53

Query: 867  SLAKTTNSN--LVQILESEIGCAEEEDDSNQVEGLPNGFPFKIRDEPGMKTIILEKEYEG 694
            S +K ++S+  L+++++SEI CA E DD ++VE +P GFPF+I+D PG++T+ L++ Y+ 
Sbjct: 54   SSSKRSSSDDSLLRVIDSEIQCATETDDHDRVEEVPEGFPFEIQDHPGLQTVTLKRTYQD 113

Query: 693  EVIKVEVHTPEIYXXXXXXXXXXXXXXXXXGHAS---IALVVKVTKGRNGTSLEFGCTAD 523
            EVI VEVH P++                    A+   I LVV V+K + G SLEF C+A 
Sbjct: 114  EVIVVEVHMPDLVSGQDANDNDEDDDADDDNKANQSCIPLVVSVSK-KTGPSLEFSCSAY 172

Query: 522  PDEITIDSLIVKDHDTSEDDLAYGGPDFQDLDENLQKGFYKYLEVRGIKPSTTNFLYEYM 343
            PDEI+IDSLIVK+ + S+D +AY GPDF DLDENLQK F+KYLE+RGIKPSTTNFL+EYM
Sbjct: 173  PDEISIDSLIVKNPEHSDDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTNFLHEYM 232

Query: 342  MKKDGKEYLRWLKNVKKFVE 283
            + KD +EYL WL  +K FVE
Sbjct: 233  INKDSREYLTWLTKLKSFVE 252


>ref|XP_002316261.1| predicted protein [Populus trichocarpa] gi|222865301|gb|EEF02432.1|
            predicted protein [Populus trichocarpa]
          Length = 255

 Score =  219 bits (559), Expect = 8e-55
 Identities = 123/260 (47%), Positives = 174/260 (66%), Gaps = 6/260 (2%)
 Frame = -1

Query: 1044 MAFTNILRRTCSSVVPL-TRAIRT-QRNYSSAIFTHLRNNTN---KSVS-QELLRRASVP 883
            M+FT ILR++ S+  PL +R +R  QR+Y SA+F+ L+   N   KS S    L+R    
Sbjct: 1    MSFTAILRKSASAATPLASRLVRVGQRDYHSALFSALKRQVNLPRKSPSFVPFLQRYCSA 60

Query: 882  ALHFSSLAKTTNSNLVQILESEIGCAEEEDDSNQVEGLPNGFPFKIRDEPGMKTIILEKE 703
            A    +L   +  +L++++ESEI  A+E DD+++VE +P  FPFKI D  G +T+IL +E
Sbjct: 61   ATE--TLRPGSTESLLRVIESEIKDAQENDDNDRVEEIPKDFPFKIDDNAGQQTVILTRE 118

Query: 702  YEGEVIKVEVHTPEIYXXXXXXXXXXXXXXXXXGHASIALVVKVTKGRNGTSLEFGCTAD 523
            YEGE++KVEVH P+                     +SI LVV V+K ++GT L+F C A 
Sbjct: 119  YEGELVKVEVHMPDFVTGEENDVDDDKEQPV---QSSIPLVVTVSK-KSGTCLQFNCVAY 174

Query: 522  PDEITIDSLIVKDHDTSEDDLAYGGPDFQDLDENLQKGFYKYLEVRGIKPSTTNFLYEYM 343
             DEITIDS+ +   +TSED++A+ GP+F DLDENL+KGF+KYLE+RGIK STTNFL+EYM
Sbjct: 175  ADEITIDSISIGVPETSEDEMAFDGPNFHDLDENLKKGFHKYLEIRGIKASTTNFLHEYM 234

Query: 342  MKKDGKEYLRWLKNVKKFVE 283
            + KD +EY+ WL N+K+F+E
Sbjct: 235  ISKDSREYMGWLSNLKQFIE 254


>ref|NP_001240899.1| uncharacterized protein LOC100818815 [Glycine max]
            gi|255640060|gb|ACU20321.1| unknown [Glycine max]
          Length = 253

 Score =  214 bits (544), Expect = 4e-53
 Identities = 122/262 (46%), Positives = 160/262 (61%), Gaps = 8/262 (3%)
 Frame = -1

Query: 1044 MAFTNILRRTCSSVVPLTRAIRTQRN----YSSAIFTHLRNNTNKSVSQELLRRASVPAL 877
            MAF +ILR++ S    L  A +  +N    + S  FT +  + +K         + VP  
Sbjct: 1    MAFNSILRKSGSFARALAVAGQLTKNSNLGHRSLHFTAINQHQHKD--------SFVPRF 52

Query: 876  HFSSLAK----TTNSNLVQILESEIGCAEEEDDSNQVEGLPNGFPFKIRDEPGMKTIILE 709
            HFSS+A     T++ NL++++ESEI CA+E DD N  E +P  FPFKI D PG +TI+LE
Sbjct: 53   HFSSVASKKKPTSDENLLRVIESEIECAQETDDHNAAEEVPGNFPFKIIDSPGQQTIMLE 112

Query: 708  KEYEGEVIKVEVHTPEIYXXXXXXXXXXXXXXXXXGHASIALVVKVTKGRNGTSLEFGCT 529
            + Y+ E IKVEVH P++                    +SI L + V K ++G  LEF C 
Sbjct: 113  RTYQDEEIKVEVHMPDLVTGEENDDDNDNQSERTA-QSSIPLSISVHK-KDGPYLEFNCV 170

Query: 528  ADPDEITIDSLIVKDHDTSEDDLAYGGPDFQDLDENLQKGFYKYLEVRGIKPSTTNFLYE 349
              PDEI ID L VK+ D +ED +AY GP FQ LDENLQK F+KYLE+RGIKPSTTNFL+E
Sbjct: 171  GYPDEIVIDGLSVKNPDLTEDQVAYEGPGFQTLDENLQKSFHKYLEIRGIKPSTTNFLHE 230

Query: 348  YMMKKDGKEYLRWLKNVKKFVE 283
            YM+ KD KEYL WL  +K FV+
Sbjct: 231  YMINKDSKEYLVWLNKLKSFVQ 252


>ref|XP_002308182.1| predicted protein [Populus trichocarpa] gi|222854158|gb|EEE91705.1|
            predicted protein [Populus trichocarpa]
          Length = 245

 Score =  212 bits (539), Expect = 2e-52
 Identities = 124/260 (47%), Positives = 160/260 (61%), Gaps = 5/260 (1%)
 Frame = -1

Query: 1044 MAFTNILRRTCSSVVPLT-RAIRTQRNYSSAIFTHLRNNTNKSVSQELLRRASVPALHFS 868
            MAF ++LRR   S +PL  R + + R +  AI T L       V      R  +P  HFS
Sbjct: 1    MAFNSVLRRASKSFLPLAIRTVGSPRTFQRAIPTVL------FVENRTTLRNFLPFSHFS 54

Query: 867  SLAKT----TNSNLVQILESEIGCAEEEDDSNQVEGLPNGFPFKIRDEPGMKTIILEKEY 700
            + A +     + NL++ LE+EI CAEE  D   VE +PN FPFKI D PG +TI L +++
Sbjct: 55   TAATSEKPIADDNLIRALETEIDCAEEPQD---VEDIPNEFPFKIEDNPGERTISLNRKF 111

Query: 699  EGEVIKVEVHTPEIYXXXXXXXXXXXXXXXXXGHASIALVVKVTKGRNGTSLEFGCTADP 520
            + E IK+EV  P +                    +SI LVV ++KG +G  +EFG TA P
Sbjct: 112  QDETIKIEVDMPNVSIDVEDTDDNTKDADV----SSIPLVVSISKG-SGQYMEFGITAFP 166

Query: 519  DEITIDSLIVKDHDTSEDDLAYGGPDFQDLDENLQKGFYKYLEVRGIKPSTTNFLYEYMM 340
            DEITIDSL +K+ + S D+LAY GPDF DLDENLQ  F+K+LE+RGIKPSTTN L++YM 
Sbjct: 167  DEITIDSLSIKNPENS-DELAYAGPDFNDLDENLQNAFHKHLEIRGIKPSTTNVLFDYMA 225

Query: 339  KKDGKEYLRWLKNVKKFVEK 280
             KD KEYL WLKN+K FVEK
Sbjct: 226  NKDNKEYLLWLKNLKNFVEK 245


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