BLASTX nr result

ID: Coptis24_contig00009357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009357
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93893.1| unknown [Populus trichocarpa]                          226   7e-57
ref|XP_002328706.1| predicted protein [Populus trichocarpa] gi|1...   223   3e-56
ref|XP_002331140.1| predicted protein [Populus trichocarpa] gi|2...   218   1e-54
ref|XP_002263444.1| PREDICTED: uncharacterized protein LOC100266...   217   3e-54
emb|CBI29715.3| unnamed protein product [Vitis vinifera]              217   3e-54

>gb|ABK93893.1| unknown [Populus trichocarpa]
          Length = 209

 Score =  226 bits (575), Expect = 7e-57
 Identities = 113/183 (61%), Positives = 141/183 (77%), Gaps = 1/183 (0%)
 Frame = +2

Query: 101 NHVSFVCKDVIQSAKFYQEVLGFVLIRRPSSFRFEGAWLFNYGIGIHLLQRNSITDDAKP 280
           NHVSFVCK V +S KFY++VLGFVLI+RPSSF+FEGAWLF+YGIGIHLL+    +D A  
Sbjct: 31  NHVSFVCKSVPESVKFYEDVLGFVLIKRPSSFKFEGAWLFSYGIGIHLLE----SDKAPT 86

Query: 281 KPSVINPKDNHISFQCTDIELVKRKLGEMGMKYVDAIVEEGGITVDQLFFHDPDGYMIEI 460
           K S INPKDNHISFQC+D+ LV +KL E  ++YV A+VEEGGITVDQLFFHDPDGYM+EI
Sbjct: 87  KKSKINPKDNHISFQCSDMNLVIKKLEEKNIEYVTAVVEEGGITVDQLFFHDPDGYMVEI 146

Query: 461 CNCENLPVLPLSACPL-KKPQPLMDSNKIKNQSSFPSSKVLRAADVETRMMDNFMKNMIK 637
           CNC+NLPVLPLS+CPL K P+P        +     S ++   A+V + MMDN + +M+ 
Sbjct: 147 CNCQNLPVLPLSSCPLIKAPKPSASLASSPSLYGKQSWELRCFAEVASVMMDNLVVDMMD 206

Query: 638 IAM 646
           I++
Sbjct: 207 ISI 209


>ref|XP_002328706.1| predicted protein [Populus trichocarpa] gi|118483150|gb|ABK93481.1|
           unknown [Populus trichocarpa]
           gi|222839004|gb|EEE77355.1| predicted protein [Populus
           trichocarpa]
          Length = 213

 Score =  223 bits (569), Expect = 3e-56
 Identities = 114/188 (60%), Positives = 140/188 (74%), Gaps = 6/188 (3%)
 Frame = +2

Query: 101 NHVSFVCKDVIQSAKFYQEVLGFVLIRRPSSFRFEGAWLFNYGIGIHLLQRNSITDDAKP 280
           NH+SFVCK V +S  FY +VLGFVLI+RPSSF+FEGAWLFNYGIGIHLL+    +D A  
Sbjct: 35  NHISFVCKSVAESVGFYYDVLGFVLIKRPSSFKFEGAWLFNYGIGIHLLE----SDKAPA 90

Query: 281 KPSVINPKDNHISFQCTDIELVKRKLGEMGMKYVDAIVEEGGITVDQLFFHDPDGYMIEI 460
           K S INPKDNHISFQC+D+ LV +KL E  ++YV A+VEEGGITVDQLFFHDPDG+M+EI
Sbjct: 91  KKSKINPKDNHISFQCSDMNLVIKKLEEKNIEYVTAVVEEGGITVDQLFFHDPDGHMVEI 150

Query: 461 CNCENLPVLPLSACPLKKPQPLMDSNKIKNQSSFPSS------KVLRAADVETRMMDNFM 622
           CNC+NLPVLPLSACP+K P+        K  SS PS       ++   A+V + MMDN +
Sbjct: 151 CNCQNLPVLPLSACPIKLPK-----TNGKLASSVPSLCGKQSWELQCFAEVASLMMDNLV 205

Query: 623 KNMIKIAM 646
            NM+  ++
Sbjct: 206 VNMMDFSI 213


>ref|XP_002331140.1| predicted protein [Populus trichocarpa] gi|222872868|gb|EEF09999.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  218 bits (556), Expect = 1e-54
 Identities = 104/142 (73%), Positives = 122/142 (85%), Gaps = 1/142 (0%)
 Frame = +2

Query: 101 NHVSFVCKDVIQSAKFYQEVLGFVLIRRPSSFRFEGAWLFNYGIGIHLLQRNSITDDAKP 280
           NHVSFVCK V +S KFY++VLGFVLI+RPSSF+FEGAWLF+YGIGIHLL+    +D A  
Sbjct: 6   NHVSFVCKSVPESVKFYEDVLGFVLIKRPSSFKFEGAWLFSYGIGIHLLE----SDKAPT 61

Query: 281 KPSVINPKDNHISFQCTDIELVKRKLGEMGMKYVDAIVEEGGITVDQLFFHDPDGYMIEI 460
           K S INPKDNHISFQC+D+ LV +KL E  ++YV A+VEEGGITVDQLFFHDPDGYM+EI
Sbjct: 62  KKSKINPKDNHISFQCSDMNLVIKKLEEKNIEYVTAVVEEGGITVDQLFFHDPDGYMVEI 121

Query: 461 CNCENLPVLPLSACPL-KKPQP 523
           CNC+NLPVLPLS+CPL K P+P
Sbjct: 122 CNCQNLPVLPLSSCPLIKAPKP 143


>ref|XP_002263444.1| PREDICTED: uncharacterized protein LOC100266411 [Vitis vinifera]
          Length = 202

 Score =  217 bits (552), Expect = 3e-54
 Identities = 106/181 (58%), Positives = 134/181 (74%)
 Frame = +2

Query: 101 NHVSFVCKDVIQSAKFYQEVLGFVLIRRPSSFRFEGAWLFNYGIGIHLLQRNSITDDAKP 280
           NHVSFVCK V +S KFY+EVLGFVLI+RPSSF FEGAWLFNYGIGIHLL+    +++   
Sbjct: 33  NHVSFVCKSVPKSVKFYEEVLGFVLIKRPSSFDFEGAWLFNYGIGIHLLE----SEEVPA 88

Query: 281 KPSVINPKDNHISFQCTDIELVKRKLGEMGMKYVDAIVEEGGITVDQLFFHDPDGYMIEI 460
           K   INPKDNHISFQ +D+ LV +KLGEM ++YV A+V+EGG+ VDQLFFHDPDGYM+EI
Sbjct: 89  KKGAINPKDNHISFQSSDMGLVVKKLGEMKIEYVTAVVKEGGVKVDQLFFHDPDGYMVEI 148

Query: 461 CNCENLPVLPLSACPLKKPQPLMDSNKIKNQSSFPSSKVLRAADVETRMMDNFMKNMIKI 640
           CNC+NLPVLPLS+CP+    P  +    K Q            ++E +MM+N + +M+ I
Sbjct: 149 CNCQNLPVLPLSSCPITNKLPKGNRKYGKRQQC--------GGEMEAQMMENLVVDMMDI 200

Query: 641 A 643
           +
Sbjct: 201 S 201


>emb|CBI29715.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  217 bits (552), Expect = 3e-54
 Identities = 106/181 (58%), Positives = 134/181 (74%)
 Frame = +2

Query: 101 NHVSFVCKDVIQSAKFYQEVLGFVLIRRPSSFRFEGAWLFNYGIGIHLLQRNSITDDAKP 280
           NHVSFVCK V +S KFY+EVLGFVLI+RPSSF FEGAWLFNYGIGIHLL+    +++   
Sbjct: 20  NHVSFVCKSVPKSVKFYEEVLGFVLIKRPSSFDFEGAWLFNYGIGIHLLE----SEEVPA 75

Query: 281 KPSVINPKDNHISFQCTDIELVKRKLGEMGMKYVDAIVEEGGITVDQLFFHDPDGYMIEI 460
           K   INPKDNHISFQ +D+ LV +KLGEM ++YV A+V+EGG+ VDQLFFHDPDGYM+EI
Sbjct: 76  KKGAINPKDNHISFQSSDMGLVVKKLGEMKIEYVTAVVKEGGVKVDQLFFHDPDGYMVEI 135

Query: 461 CNCENLPVLPLSACPLKKPQPLMDSNKIKNQSSFPSSKVLRAADVETRMMDNFMKNMIKI 640
           CNC+NLPVLPLS+CP+    P  +    K Q            ++E +MM+N + +M+ I
Sbjct: 136 CNCQNLPVLPLSSCPITNKLPKGNRKYGKRQQC--------GGEMEAQMMENLVVDMMDI 187

Query: 641 A 643
           +
Sbjct: 188 S 188


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