BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009356
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178772.3| uncharacterized protein [Arabidopsis thaliana] ...    69   6e-10
ref|YP_717145.1| hypothetical protein BrnapMp048 [Brassica napus...    69   6e-10
ref|YP_004927473.1| orf311 (mitochondrion) [Brassica oleracea] g...    69   6e-10
ref|YP_004927863.1| orf305 (mitochondrion) [Brassica rapa subsp....    69   6e-10
gb|AAM15514.1| hypothetical protein [Arabidopsis thaliana]             69   6e-10

>ref|NP_178772.3| uncharacterized protein [Arabidopsis thaliana]
           gi|330250974|gb|AEC06068.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 251

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
 Frame = -1

Query: 242 VNQ--PEAGHVPPANKVASRGEEAGPSNRXXXXXXXXXXPDEIIGGDSVLSIQRRLLA-- 75
           VNQ   EAG   PAN V   GEEAGP              DE+IGGDSV +I+RRLLA  
Sbjct: 98  VNQVPQEAGPALPANPVPPGGEEAGP------VVPYPYRRDEMIGGDSVEAIERRLLAKY 151

Query: 74  PDFPPSAESIKFARFQAEDLFEVK 3
           P+  PSAE I+ AR +AEDLFE+K
Sbjct: 152 PEGSPSAEIIEMARIEAEDLFEIK 175


>ref|YP_717145.1| hypothetical protein BrnapMp048 [Brassica napus]
           gi|37591092|dbj|BAC98894.1| hypothetical protein
           [Brassica napus]
          Length = 322

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/76 (55%), Positives = 47/76 (61%)
 Frame = -1

Query: 230 EAGHVPPANKVASRGEEAGPSNRXXXXXXXXXXPDEIIGGDSVLSIQRRLLAPDFPPSAE 51
           EAG   PAN V S G+EAGPS             DE+IGGDSV +I+RRLLA    PS E
Sbjct: 177 EAGPALPANPVPSGGDEAGPS------VPYPYRRDEMIGGDSVEAIERRLLAQFAYPSYE 230

Query: 50  SIKFARFQAEDLFEVK 3
            I+ A  QAEDLFEVK
Sbjct: 231 DIQLAHIQAEDLFEVK 246


>ref|YP_004927473.1| orf311 (mitochondrion) [Brassica oleracea]
           gi|335354946|gb|AEH43501.1| orf311 [Brassica oleracea]
          Length = 311

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/76 (55%), Positives = 47/76 (61%)
 Frame = -1

Query: 230 EAGHVPPANKVASRGEEAGPSNRXXXXXXXXXXPDEIIGGDSVLSIQRRLLAPDFPPSAE 51
           EAG   PAN V S G+EAGPS             DE+IGGDSV +I+RRLLA    PS E
Sbjct: 166 EAGPALPANPVPSGGDEAGPS------VPYPYRRDEMIGGDSVEAIERRLLAQFAYPSYE 219

Query: 50  SIKFARFQAEDLFEVK 3
            I+ A  QAEDLFEVK
Sbjct: 220 DIQLAHIQAEDLFEVK 235


>ref|YP_004927863.1| orf305 (mitochondrion) [Brassica rapa subsp. campestris]
           gi|353531376|ref|YP_004927766.1| orf305 (mitochondrion)
           [Brassica juncea] gi|134153044|gb|ABO64356.1| unknown
           [Brassica juncea var. tumida]
           gi|335354882|gb|AEH43438.1| orf305 [Brassica rapa subsp.
           campestris] gi|335355109|gb|AEH43662.1| orf305 [Brassica
           juncea] gi|339511309|emb|CBX48364.1| unnamed protein
           product [Brassica napus]
          Length = 305

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/76 (55%), Positives = 47/76 (61%)
 Frame = -1

Query: 230 EAGHVPPANKVASRGEEAGPSNRXXXXXXXXXXPDEIIGGDSVLSIQRRLLAPDFPPSAE 51
           EAG   PAN V S G+EAGPS             DE+IGGDSV +I+RRLLA    PS E
Sbjct: 160 EAGPALPANPVPSGGDEAGPS------VPYPYRRDEMIGGDSVEAIERRLLAQFAYPSYE 213

Query: 50  SIKFARFQAEDLFEVK 3
            I+ A  QAEDLFEVK
Sbjct: 214 DIQLAHIQAEDLFEVK 229


>gb|AAM15514.1| hypothetical protein [Arabidopsis thaliana]
          Length = 477

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
 Frame = -1

Query: 242 VNQ--PEAGHVPPANKVASRGEEAGPSNRXXXXXXXXXXPDEIIGGDSVLSIQRRLLA-- 75
           VNQ   EAG   PAN V   GEEAGP              DE+IGGDSV +I+RRLLA  
Sbjct: 171 VNQVPQEAGPALPANPVPPGGEEAGP------VVPYPYRRDEMIGGDSVEAIERRLLAKY 224

Query: 74  PDFPPSAESIKFARFQAEDLFEVK 3
           P+  PSAE I+ AR +AEDLFE+K
Sbjct: 225 PEGSPSAEIIEMARIEAEDLFEIK 248