BLASTX nr result

ID: Coptis24_contig00009344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009344
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515302.1| DNA replication regulator dpb11, putative [R...   223   1e-56
ref|XP_004136156.1| PREDICTED: uncharacterized protein LOC101219...   221   6e-56
ref|XP_003535960.1| PREDICTED: BRCT domain-containing protein At...   219   2e-55
ref|NP_192120.4| transcription coactivator protein [Arabidopsis ...   215   3e-54
ref|XP_002301504.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54

>ref|XP_002515302.1| DNA replication regulator dpb11, putative [Ricinus communis]
           gi|223545782|gb|EEF47286.1| DNA replication regulator
           dpb11, putative [Ricinus communis]
          Length = 1069

 Score =  223 bits (568), Expect = 1e-56
 Identities = 102/139 (73%), Positives = 121/139 (87%)
 Frame = +1

Query: 1   VDVGEYGQRCSHLIVDKNVYDDSECVVARADGKVVVTALWVEHCIDVGMLVDSSSILYRP 180
           VD G+Y + C+H+IVDK VY+D  C+ AR D K +VT LWV+H  D+G++VD++SI+YRP
Sbjct: 38  VDAGQYNENCTHVIVDKIVYNDPICIAARNDRKTLVTGLWVDHSYDIGLVVDATSIMYRP 97

Query: 181 VKDLNGIPGAKSLSICLTGYQRQDRDDIMRMVALMGANFSKPLVANKVTHLICYKFEGEK 360
           ++DLNGIPGAKSL +CLTGYQRQDRDDIM MV+LMGA FSKPLVANKVTHLICYKFEGEK
Sbjct: 98  LRDLNGIPGAKSLIMCLTGYQRQDRDDIMTMVSLMGAQFSKPLVANKVTHLICYKFEGEK 157

Query: 361 YELAKKLKKIRLVNHSWLE 417
           YELA KLKKI+LVNH WLE
Sbjct: 158 YELANKLKKIKLVNHRWLE 176


>ref|XP_004136156.1| PREDICTED: uncharacterized protein LOC101219784 [Cucumis sativus]
          Length = 1372

 Score =  221 bits (562), Expect = 6e-56
 Identities = 103/141 (73%), Positives = 122/141 (86%), Gaps = 2/141 (1%)
 Frame = +1

Query: 1   VDVGEYGQRCSHLIVDKN--VYDDSECVVARADGKVVVTALWVEHCIDVGMLVDSSSILY 174
           VDVG+YG  CSH+IVDKN  VYDD  CV AR DGK++VT LWV+H  D G+L D++S+LY
Sbjct: 38  VDVGQYGPSCSHVIVDKNKIVYDDPVCVAARNDGKLLVTGLWVDHRYDSGLLADATSVLY 97

Query: 175 RPVKDLNGIPGAKSLSICLTGYQRQDRDDIMRMVALMGANFSKPLVANKVTHLICYKFEG 354
           RP+++LNGIPGAKSL +CLTGYQRQDRDD+M MV L+GA FSKPLVANKVTHLICYKFEG
Sbjct: 98  RPLRELNGIPGAKSLVMCLTGYQRQDRDDVMTMVGLIGAQFSKPLVANKVTHLICYKFEG 157

Query: 355 EKYELAKKLKKIRLVNHSWLE 417
           +KYELAK+L+ I+LVNH WLE
Sbjct: 158 DKYELAKRLRTIKLVNHRWLE 178


>ref|XP_003535960.1| PREDICTED: BRCT domain-containing protein At4g02110-like [Glycine
           max]
          Length = 200

 Score =  219 bits (557), Expect = 2e-55
 Identities = 104/139 (74%), Positives = 116/139 (83%)
 Frame = +1

Query: 1   VDVGEYGQRCSHLIVDKNVYDDSECVVARADGKVVVTALWVEHCIDVGMLVDSSSILYRP 180
           VDVG+YG  C+H+IVD   YDD  CV AR D K VVTALWVEH  D+GM VD++S++YRP
Sbjct: 39  VDVGQYGGSCTHVIVDNVAYDDPVCVAARNDRKTVVTALWVEHSADIGMPVDATSVMYRP 98

Query: 181 VKDLNGIPGAKSLSICLTGYQRQDRDDIMRMVALMGANFSKPLVANKVTHLICYKFEGEK 360
           +KDL+GIPGAK L +CLTGY RQDRDDIM MV LMGA FSKPLVANKVTHLICYKFEGEK
Sbjct: 99  LKDLDGIPGAKDLIMCLTGYLRQDRDDIMTMVGLMGAQFSKPLVANKVTHLICYKFEGEK 158

Query: 361 YELAKKLKKIRLVNHSWLE 417
           YELAKKL  I+LVNH WLE
Sbjct: 159 YELAKKLGTIKLVNHRWLE 177


>ref|NP_192120.4| transcription coactivator protein [Arabidopsis thaliana]
           gi|363548502|sp|O04251.3|Y4211_ARATH RecName: Full=BRCT
           domain-containing protein At4g02110
           gi|332656725|gb|AEE82125.1| transcription coactivator
           protein [Arabidopsis thaliana]
          Length = 1329

 Score =  215 bits (548), Expect = 3e-54
 Identities = 99/139 (71%), Positives = 119/139 (85%)
 Frame = +1

Query: 1   VDVGEYGQRCSHLIVDKNVYDDSECVVARADGKVVVTALWVEHCIDVGMLVDSSSILYRP 180
           VDVG++ Q C+HLIVDK +YDD  CV AR  GKVVVT  WV+H  D+GML +++SILYRP
Sbjct: 40  VDVGQFTQSCTHLIVDKLLYDDPICVAARNSGKVVVTGSWVDHSFDIGMLDNANSILYRP 99

Query: 181 VKDLNGIPGAKSLSICLTGYQRQDRDDIMRMVALMGANFSKPLVANKVTHLICYKFEGEK 360
           ++DLNGIPG+K+L +CLTGYQ  DR+DIMRMV LMG  FSKPLVAN+VTHLICYKFEGEK
Sbjct: 100 LRDLNGIPGSKALVVCLTGYQGHDREDIMRMVELMGGQFSKPLVANRVTHLICYKFEGEK 159

Query: 361 YELAKKLKKIRLVNHSWLE 417
           YELAK++K+I+LVNH WLE
Sbjct: 160 YELAKRIKRIKLVNHRWLE 178


>ref|XP_002301504.1| predicted protein [Populus trichocarpa] gi|222843230|gb|EEE80777.1|
           predicted protein [Populus trichocarpa]
          Length = 1221

 Score =  215 bits (548), Expect = 3e-54
 Identities = 99/139 (71%), Positives = 118/139 (84%)
 Frame = +1

Query: 1   VDVGEYGQRCSHLIVDKNVYDDSECVVARADGKVVVTALWVEHCIDVGMLVDSSSILYRP 180
           VD  +Y + C+H+IVDK VYDD  CV AR DGK VV  LWV H  D+GM VD++SI+YRP
Sbjct: 39  VDAVQYSENCTHVIVDKIVYDDPVCVGARNDGKTVVRGLWVNHSFDIGMPVDATSIMYRP 98

Query: 181 VKDLNGIPGAKSLSICLTGYQRQDRDDIMRMVALMGANFSKPLVANKVTHLICYKFEGEK 360
           ++DLNGIP AK++++CLTGYQRQDRDDIM MV LMGA+FSKPLVAN+VTHLICYKFEGEK
Sbjct: 99  LRDLNGIPRAKNITMCLTGYQRQDRDDIMTMVGLMGAHFSKPLVANRVTHLICYKFEGEK 158

Query: 361 YELAKKLKKIRLVNHSWLE 417
           YELA K+KK++LVNH WLE
Sbjct: 159 YELANKMKKMKLVNHRWLE 177


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