BLASTX nr result

ID: Coptis24_contig00009338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009338
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516528.1| tryptophanyl-tRNA synthetase, putative [Rici...   371   e-100
ref|XP_002304617.1| predicted protein [Populus trichocarpa] gi|2...   363   6e-98
ref|XP_002273029.1| PREDICTED: tryptophanyl-tRNA synthetase [Vit...   362   7e-98
ref|XP_003523753.1| PREDICTED: tryptophanyl-tRNA synthetase-like...   355   9e-96
ref|XP_004171480.1| PREDICTED: tryptophan--tRNA ligase-like, par...   355   2e-95

>ref|XP_002516528.1| tryptophanyl-tRNA synthetase, putative [Ricinus communis]
           gi|223544348|gb|EEF45869.1| tryptophanyl-tRNA
           synthetase, putative [Ricinus communis]
          Length = 412

 Score =  371 bits (952), Expect = e-100
 Identities = 186/226 (82%), Positives = 196/226 (86%)
 Frame = +2

Query: 2   DENVGAALLTYPVLMASDILLYQSDLVPVGEDQKQHLELTRELAERVNXXXXXXXXXXXX 181
           DENVG ALLTYPVLMASDILLYQSD VPVGEDQKQHLELTRELAERVN            
Sbjct: 187 DENVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLG 246

Query: 182 XXXXAIFKVPEPLIPPTGARVMSLTDGLSKMSKSAPSELSRINLLDPKDVIVNKIKRCKT 361
               AIFKVPEPLIPP GARVMSLTDGL+KMSKSAPS+ SRINLLDPKDVI NKIKRCKT
Sbjct: 247 GRGGAIFKVPEPLIPPAGARVMSLTDGLAKMSKSAPSDQSRINLLDPKDVIANKIKRCKT 306

Query: 362 DSFSGLEFDNPERPECNNLLSVYQIITGRTKEEVTQECQDMNWGSFKPLLADALVQHLHP 541
           DSF GLEFDNPERPECNNLLSVYQ+++G+TKEEV QECQDMNWG+FKPLL DAL+ HLHP
Sbjct: 307 DSFPGLEFDNPERPECNNLLSVYQLVSGKTKEEVAQECQDMNWGTFKPLLTDALIGHLHP 366

Query: 542 IQVRYEEIISDSAYLDRVLVEGATKASNIADATLNNVYQAMGFLPR 679
           IQV+YEEIISDSAYLDRVL EGA  A+ IADATLNNVYQAMGFL R
Sbjct: 367 IQVQYEEIISDSAYLDRVLEEGAANAAEIADATLNNVYQAMGFLRR 412


>ref|XP_002304617.1| predicted protein [Populus trichocarpa] gi|222842049|gb|EEE79596.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  363 bits (931), Expect = 6e-98
 Identities = 183/226 (80%), Positives = 193/226 (85%)
 Frame = +2

Query: 2   DENVGAALLTYPVLMASDILLYQSDLVPVGEDQKQHLELTRELAERVNXXXXXXXXXXXX 181
           DENVG ALLTYPVLMASDILLYQSD VPVGEDQKQHLELTRELAERVN            
Sbjct: 178 DENVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLG 237

Query: 182 XXXXAIFKVPEPLIPPTGARVMSLTDGLSKMSKSAPSELSRINLLDPKDVIVNKIKRCKT 361
               AIFKVPEPLIPP GARVMSLTDGLSKMSKSAPS+ SRINLLDPKDVI NKIKRCKT
Sbjct: 238 GRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIANKIKRCKT 297

Query: 362 DSFSGLEFDNPERPECNNLLSVYQIITGRTKEEVTQECQDMNWGSFKPLLADALVQHLHP 541
           DSF  LEFDNPERPECNNLLSVYQ+++G+TKE+V +ECQ +NWGSFKPLL DAL++HLHP
Sbjct: 298 DSFPALEFDNPERPECNNLLSVYQLVSGKTKEDVAKECQGLNWGSFKPLLTDALIEHLHP 357

Query: 542 IQVRYEEIISDSAYLDRVLVEGATKASNIADATLNNVYQAMGFLPR 679
           IQVRYEEI SDSAYLD VL EGA KAS IADATL NVYQAMGFL R
Sbjct: 358 IQVRYEEIHSDSAYLDSVLEEGARKASEIADATLKNVYQAMGFLRR 403


>ref|XP_002273029.1| PREDICTED: tryptophanyl-tRNA synthetase [Vitis vinifera]
           gi|296081565|emb|CBI20570.3| unnamed protein product
           [Vitis vinifera]
          Length = 416

 Score =  362 bits (930), Expect = 7e-98
 Identities = 182/226 (80%), Positives = 194/226 (85%)
 Frame = +2

Query: 2   DENVGAALLTYPVLMASDILLYQSDLVPVGEDQKQHLELTRELAERVNXXXXXXXXXXXX 181
           DENVG ALLTYPVLMASDILLYQSD VPVGEDQKQHLELTRELAERVN            
Sbjct: 191 DENVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLG 250

Query: 182 XXXXAIFKVPEPLIPPTGARVMSLTDGLSKMSKSAPSELSRINLLDPKDVIVNKIKRCKT 361
               AIFKVPEPLIPP GARVMSLTDG SKMSKSA S+ SRINLLDPKDVI NKIKRCKT
Sbjct: 251 GRGGAIFKVPEPLIPPEGARVMSLTDGCSKMSKSASSDQSRINLLDPKDVIANKIKRCKT 310

Query: 362 DSFSGLEFDNPERPECNNLLSVYQIITGRTKEEVTQECQDMNWGSFKPLLADALVQHLHP 541
           DSF GLEFDNPERPECNNLL++YQ+++GRTKEEV QECQ MNWG FK +L DAL+ HLHP
Sbjct: 311 DSFPGLEFDNPERPECNNLLTIYQLMSGRTKEEVAQECQGMNWGVFKRILTDALIDHLHP 370

Query: 542 IQVRYEEIISDSAYLDRVLVEGATKASNIADATLNNVYQAMGFLPR 679
           IQVRYEEI+SDSAYLDR+L EGATKA++IADATLNNVYQAMGFL R
Sbjct: 371 IQVRYEEIMSDSAYLDRLLAEGATKAADIADATLNNVYQAMGFLRR 416


>ref|XP_003523753.1| PREDICTED: tryptophanyl-tRNA synthetase-like [Glycine max]
          Length = 398

 Score =  355 bits (912), Expect = 9e-96
 Identities = 175/226 (77%), Positives = 192/226 (84%)
 Frame = +2

Query: 2   DENVGAALLTYPVLMASDILLYQSDLVPVGEDQKQHLELTRELAERVNXXXXXXXXXXXX 181
           DE VG ALLTYPVLMASDILLYQSD VPVGEDQKQHLELTR+LAERVN            
Sbjct: 167 DEEVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLELTRDLAERVNNLYGGRKWKKLG 226

Query: 182 XXXXAIFKVPEPLIPPTGARVMSLTDGLSKMSKSAPSELSRINLLDPKDVIVNKIKRCKT 361
                IFKVPEPLIPP GAR+MSLTDGLSKMSKSAPS+ SRIN+LDPKD+I NKIKRCKT
Sbjct: 227 GRGGTIFKVPEPLIPPAGARIMSLTDGLSKMSKSAPSDQSRINILDPKDLIANKIKRCKT 286

Query: 362 DSFSGLEFDNPERPECNNLLSVYQIITGRTKEEVTQECQDMNWGSFKPLLADALVQHLHP 541
           DSF GLEFDN ERPECNNLLS+YQ+I+G+TKEEV QECQ+MNWG+FKPLL DAL+ HLHP
Sbjct: 287 DSFPGLEFDNSERPECNNLLSIYQLISGKTKEEVVQECQNMNWGAFKPLLTDALIDHLHP 346

Query: 542 IQVRYEEIISDSAYLDRVLVEGATKASNIADATLNNVYQAMGFLPR 679
           IQVRYEEI+SDS YLD VL +GA  A++IAD+TLNNVYQAMGFL R
Sbjct: 347 IQVRYEEIMSDSGYLDGVLAQGARNAADIADSTLNNVYQAMGFLKR 392


>ref|XP_004171480.1| PREDICTED: tryptophan--tRNA ligase-like, partial [Cucumis sativus]
          Length = 310

 Score =  355 bits (910), Expect = 2e-95
 Identities = 177/226 (78%), Positives = 192/226 (84%)
 Frame = +2

Query: 2   DENVGAALLTYPVLMASDILLYQSDLVPVGEDQKQHLELTRELAERVNXXXXXXXXXXXX 181
           DENVG ALLTYPVLMASDILLYQSD VPVGEDQKQHLELTRELAERVN            
Sbjct: 85  DENVGVALLTYPVLMASDILLYQSDYVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLG 144

Query: 182 XXXXAIFKVPEPLIPPTGARVMSLTDGLSKMSKSAPSELSRINLLDPKDVIVNKIKRCKT 361
                IFKVPEPLIPP GARVMSLTDGLSKMSKSAPS+ SRINLLDPKDVI NKIKRCKT
Sbjct: 145 GRGGVIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIANKIKRCKT 204

Query: 362 DSFSGLEFDNPERPECNNLLSVYQIITGRTKEEVTQECQDMNWGSFKPLLADALVQHLHP 541
           DSF GLEFDNPERPECNNLL++YQ+++G+ KE+V QEC++MNWGSFK LL DALV HLHP
Sbjct: 205 DSFPGLEFDNPERPECNNLLTIYQLVSGKGKEDVKQECENMNWGSFKILLTDALVDHLHP 264

Query: 542 IQVRYEEIISDSAYLDRVLVEGATKASNIADATLNNVYQAMGFLPR 679
           IQVRY EIISDSA+LD VL +GA KAS+IAD T+NN+YQAMGFL R
Sbjct: 265 IQVRYNEIISDSAFLDEVLADGARKASSIADVTVNNLYQAMGFLRR 310


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