BLASTX nr result

ID: Coptis24_contig00009319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009319
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313159.1| predicted protein [Populus trichocarpa] gi|2...   165   1e-38
ref|XP_002279158.1| PREDICTED: zinc finger protein 7-like [Vitis...   163   5e-38
emb|CAN77233.1| hypothetical protein VITISV_001090 [Vitis vinifera]   163   5e-38
ref|XP_002270534.1| PREDICTED: zinc finger protein 7-like [Vitis...   161   2e-37
ref|XP_002298757.1| predicted protein [Populus trichocarpa] gi|2...   161   2e-37

>ref|XP_002313159.1| predicted protein [Populus trichocarpa] gi|222849567|gb|EEE87114.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  165 bits (417), Expect = 1e-38
 Identities = 91/161 (56%), Positives = 113/161 (70%), Gaps = 1/161 (0%)
 Frame = +2

Query: 188 WLKLGLGRNGCHREVDDSDTQSKPNPNKIFSCNFCNRKFYSSQALGGHQNAHKRERGAAR 367
           WL L LG N       D D+QS+P  +K+FSCNFC RKF+SSQALGGHQNAHKRERGAAR
Sbjct: 37  WLNLRLGGNS-PSTAGDYDSQSRPTSSKVFSCNFCRRKFFSSQALGGHQNAHKRERGAAR 95

Query: 368 RYHSHSQRMMSIMGSLNFNAPNDRSLGVQTHSF-QKPSREGYHMGARFSDSNDGFGPISS 544
           RY  HSQRMM++MG L  N+P  RSLGV+ H+   KP+R+G  +G RF+++N GF  + S
Sbjct: 96  RY--HSQRMMTMMG-LPINSPMARSLGVRPHALVHKPTRDGTPIGGRFNEANPGF--VMS 150

Query: 545 SKPFLHDASSGSMWPGSFHVGPSLHPKQPSDQLKLDLNLRL 667
             PF  D ++   WPGSF +   L P+  S+ LKLDLNLRL
Sbjct: 151 WMPFALDDTADLTWPGSFRLDSQL-PETSSESLKLDLNLRL 190


>ref|XP_002279158.1| PREDICTED: zinc finger protein 7-like [Vitis vinifera]
          Length = 193

 Score =  163 bits (412), Expect = 5e-38
 Identities = 99/198 (50%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
 Frame = +2

Query: 77  EMNNFQRGGEENTRNNKSRTSHXXXXXXXXXXXXXXXWLKLGLGRNGCHREVDDSDTQSK 256
           E+++  +  E  TR++  +TS                WL L L RN       D D QSK
Sbjct: 12  EVSSNNQDAESKTRSDDEKTS---------GDDNLGEWLSLSLSRNEAFT-TGDGDPQSK 61

Query: 257 PNPNKIFSCNFCNRKFYSSQALGGHQNAHKRERGAARRYHSHSQRMMSIMGSLNFNAPND 436
           P  NKIFSCNFC RKF+SSQALGGHQNAHKRERGAA+RY SH + MM+ MG    N+   
Sbjct: 62  PAGNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSH-RMMMATMG-FPLNSLTI 119

Query: 437 RSLGVQTHSF-QKPSREGYHMGARFSDSNDGFGPISSSKPFLHDASSGSMWPGSFHVGPS 613
           RSLG Q HS   KP REG  + ARF+D N GF    +  PF+ + +  S+WPGSFHV   
Sbjct: 120 RSLGAQPHSLAHKPGREGTEVAARFNDPNTGFR--MAWTPFVMEEAMDSIWPGSFHVDKL 177

Query: 614 LHPKQPSDQLKLDLNLRL 667
             P Q SDQ KLDLNL L
Sbjct: 178 --PSQASDQHKLDLNLSL 193


>emb|CAN77233.1| hypothetical protein VITISV_001090 [Vitis vinifera]
          Length = 248

 Score =  163 bits (412), Expect = 5e-38
 Identities = 99/198 (50%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
 Frame = +2

Query: 77  EMNNFQRGGEENTRNNKSRTSHXXXXXXXXXXXXXXXWLKLGLGRNGCHREVDDSDTQSK 256
           E+++  +  E  TR++  +TS                WL L L RN       D D QSK
Sbjct: 12  EVSSNNQDAESKTRSDDEKTS---------GDDNLGEWLSLSLSRNEAFT-TGDGDPQSK 61

Query: 257 PNPNKIFSCNFCNRKFYSSQALGGHQNAHKRERGAARRYHSHSQRMMSIMGSLNFNAPND 436
           P  NKIFSCNFC RKF+SSQALGGHQNAHKRERGAA+RY SH + MM+ MG    N+   
Sbjct: 62  PAGNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSH-RMMMATMG-FPLNSLTI 119

Query: 437 RSLGVQTHSF-QKPSREGYHMGARFSDSNDGFGPISSSKPFLHDASSGSMWPGSFHVGPS 613
           RSLG Q HS   KP REG  + ARF+D N GF    +  PF+ + +  S+WPGSFHV   
Sbjct: 120 RSLGAQPHSLAHKPGREGTEVAARFNDPNTGFR--MAWTPFVMEEAMDSIWPGSFHVDKL 177

Query: 614 LHPKQPSDQLKLDLNLRL 667
             P Q SDQ KLDLNL L
Sbjct: 178 --PSQASDQHKLDLNLSL 193


>ref|XP_002270534.1| PREDICTED: zinc finger protein 7-like [Vitis vinifera]
          Length = 189

 Score =  161 bits (408), Expect = 2e-37
 Identities = 95/161 (59%), Positives = 112/161 (69%), Gaps = 1/161 (0%)
 Frame = +2

Query: 188 WLKLGLGRNGCHREVDDSDTQSKPNPNKIFSCNFCNRKFYSSQALGGHQNAHKRERGAAR 367
           WL L LGRN     +D SD QS+P  +K+FSCNFC RKFYSSQALGGHQNAHKRERGAAR
Sbjct: 37  WLNLSLGRNLPSTALD-SDPQSRPTSSKVFSCNFCMRKFYSSQALGGHQNAHKRERGAAR 95

Query: 368 RYHSHSQRMMSIMGSLNFNAPNDRSLGVQTHSF-QKPSREGYHMGARFSDSNDGFGPISS 544
           RY SH  RMM++MG L  N P  RSLGV+ HS  QKP+R+G  + ARF DSN GFG   +
Sbjct: 96  RYQSH--RMMAMMG-LPMNTP-IRSLGVRPHSLVQKPNRDGTAIVARFDDSNTGFG--MT 149

Query: 545 SKPFLHDASSGSMWPGSFHVGPSLHPKQPSDQLKLDLNLRL 667
             PF  + +   MWPGS+ +      +Q S+ LKLDLNLRL
Sbjct: 150 WTPFTLEETMDVMWPGSYRL-EQQPSEQTSEPLKLDLNLRL 189


>ref|XP_002298757.1| predicted protein [Populus trichocarpa] gi|222846015|gb|EEE83562.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  161 bits (407), Expect = 2e-37
 Identities = 90/161 (55%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
 Frame = +2

Query: 188 WLKLGLGRNGCHREVDDSDTQSKPNPNKIFSCNFCNRKFYSSQALGGHQNAHKRERGAAR 367
           WL L LG N       D D+QS+P  +K+FSCNFC RKF+SSQALGGHQNAHKRERGAAR
Sbjct: 93  WLNLSLGGNS-PSTAGDYDSQSRPTSSKVFSCNFCRRKFFSSQALGGHQNAHKRERGAAR 151

Query: 368 RYHSHSQRMMSIMGSLNFNAPNDRSLGVQTHSF-QKPSREGYHMGARFSDSNDGFGPISS 544
           RY  HSQRMM+IMG L  N+P  RSLGV+ H+   KP+R+G  +  RF++++ GF    S
Sbjct: 152 RY--HSQRMMTIMG-LPVNSPMARSLGVRPHTLVHKPNRDGTAIAGRFNEASPGFD--MS 206

Query: 545 SKPFLHDASSGSMWPGSFHVGPSLHPKQPSDQLKLDLNLRL 667
             PF  D ++   WPGSF + P   P+  S+ LKLDLNLRL
Sbjct: 207 WMPFTVDDTTDLTWPGSFRLDPQ-PPETSSEPLKLDLNLRL 246


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