BLASTX nr result

ID: Coptis24_contig00009309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009309
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531948.1| conserved hypothetical protein [Ricinus comm...   284   3e-74
ref|XP_002282479.1| PREDICTED: uncharacterized protein LOC100256...   269   2e-69
ref|XP_002324630.1| predicted protein [Populus trichocarpa] gi|2...   246   1e-62
ref|XP_002308058.1| predicted protein [Populus trichocarpa] gi|2...   234   5e-59
ref|XP_003541480.1| PREDICTED: uncharacterized protein LOC100802...   226   1e-56

>ref|XP_002531948.1| conserved hypothetical protein [Ricinus communis]
            gi|223528394|gb|EEF30430.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 393

 Score =  284 bits (727), Expect = 3e-74
 Identities = 174/389 (44%), Positives = 241/389 (61%), Gaps = 25/389 (6%)
 Frame = +2

Query: 8    SSEGEDEKSASVKEDLSELGKTLTRQLWGVASFLAPPPSTNAPTISSTEEGDSQT--LVG 181
            SS+ +   S+S K+D+S +  +++RQL GVA+FLAPPPS  +P+ + +E  DSQ+  L G
Sbjct: 10   SSDPDSSSSSSPKDDISVISDSISRQLRGVANFLAPPPSPPSPSENKSEPLDSQSQALQG 69

Query: 182  IRNDFAEXXXXXXXXXXXXXXNKAVNQISRLASNILQF----NXXXXXXXXEGLGSGVVG 349
            IRND AE              NKAV +IS+  S++LQF    N        E     V G
Sbjct: 70   IRNDLAEIGGSLKSGLSLLSTNKAVTEISKFTSSLLQFQSNSNYRDNDDDYEDDDDDVAG 129

Query: 350  ISEEALEFVREISLRPQCWTDFPLALDDIDFDMSSAQREHASTVEHLAPSLADLKMNLCP 529
            I+ E ++FV+EIS RP+CWTDFPL+L   DF MS AQREHAS VEH  PSL  L+ NL  
Sbjct: 130  ITNEVIDFVKEISSRPECWTDFPLSLH-YDFKMSDAQREHASIVEHFVPSLKALRANL-H 187

Query: 530  SNMKEEHFWMIYFILLHPRLHKHDVELLSTAQIVETRDILLQTLQKRTNAQLQTSTADGL 709
             +M +E FW+IYFILL PRL++HD+E+LST QIVETR+ILLQ LQ + N +++ S  D  
Sbjct: 188  GHMGDEQFWLIYFILLLPRLNEHDIEILSTPQIVETRNILLQKLQNKKNLKVENS--DPA 245

Query: 710  SLEVNENGIDIQEE------RSSVEEKKVFGKTVIAEDQEDLDVDKWLEE-DVETGPSFN 868
            SL ++++   I E           E  ++   T   E  ++   D+WL+E ++ T  + +
Sbjct: 246  SLHISQDSSKITERAEDNIPSQGKEVTEIANATGRLEIDDEESADQWLKETEINTDTTLD 305

Query: 869  SRNQLGNEQDVSFSDLEDDDNDTSS----SNPAKNI-HLSSPNESSGWVQLSENS----- 1018
             + +L +E+DVSFSDLE+DDND +S    S  A+ I  + SP+ SS WVQL+E+S     
Sbjct: 306  GQKKLEHEEDVSFSDLENDDNDLASRLSGSKKAQEITRVPSPSGSSDWVQLNESSETQAG 365

Query: 1019 --KPSQPASQEKDSESEESNEWLTVDEFD 1099
              K  Q  S+EKDS+  ESN+WL VD+FD
Sbjct: 366  LQKARQSISREKDSDG-ESNDWLKVDDFD 393


>ref|XP_002282479.1| PREDICTED: uncharacterized protein LOC100256011 [Vitis vinifera]
            gi|297739010|emb|CBI28255.3| unnamed protein product
            [Vitis vinifera]
          Length = 390

 Score =  269 bits (687), Expect = 2e-69
 Identities = 172/382 (45%), Positives = 220/382 (57%), Gaps = 22/382 (5%)
 Frame = +2

Query: 35   ASVKEDLSELGKTLTRQLWGVASFLAPPPS-------TNAPTISSTEEGDSQTLVGIRND 193
            A V+EDLS   +T+ RQL GVA+FLAPPPS         AP+ SS+    S TL GIRND
Sbjct: 23   AGVREDLSVFSQTIGRQLRGVAAFLAPPPSPPSSPSPVAAPSDSSSSASSSPTLRGIRND 82

Query: 194  FAEXXXXXXXXXXXXXXNKAVNQISRLASNILQFNXXXXXXXXEGLGSGVVGISEEALEF 373
             AE                      +  SN+ Q               GV GI+EE L F
Sbjct: 83   LAEIGGSFKSGL-------------KTFSNLFQSQPGDADDECLEDYDGVAGITEEVLHF 129

Query: 374  VREISLRPQCWTDFPLALDDIDFDMSSAQREHASTVEHLAPSLADLKMNLCPSNMKEEHF 553
            V ++S RP+CWTDFP ALDD DF MS  QREHAST+E LAPS ADL++ LC S M +  F
Sbjct: 130  VSQLSTRPECWTDFPSALDD-DFFMSDIQREHASTIERLAPSFADLRLQLC-SYMSDGQF 187

Query: 554  WMIYFILLHPRLHKHDVELLSTAQIVETRDILLQTLQKRTNAQLQTSTADGLSLEVNENG 733
            WMIYFILL PRL+ HD +LLST +IVE RD+LL  LQ + +A++ +  +   S E +   
Sbjct: 188  WMIYFILLLPRLNVHDSKLLSTPKIVEARDVLLLKLQNKRDAKVSSENSMVDSSEGSSKV 247

Query: 734  IDIQEERSSVEEKKVFGKTVIAEDQEDLDVDKWL-----EEDVETGPSFNSRNQLGNEQD 898
                 E S  +EK+V  ++V    + D    +       EED +TG S  +  +L NE D
Sbjct: 248  SRTLGEDSPSQEKEVLSESVSVAHEMDKGEQESTEQLLEEEDADTGNSVGAVKRLENEDD 307

Query: 899  VSFSDLEDDDND----TSSSNPAKNIHLSSPNESSGWVQLSEN------SKPSQPASQEK 1048
            VSFSDLEDDDND     S      +I +SSPN S+ WV+L+EN       +  Q  S+E+
Sbjct: 308  VSFSDLEDDDNDLSRRLSGLRLKDDIRVSSPNGSNEWVKLNENCEIHGQQRTGQSTSRER 367

Query: 1049 DSESEESNEWLTVDEFDTESVG 1114
            DSE EESN+WLTVD FD++S+G
Sbjct: 368  DSEGEESNDWLTVD-FDSDSLG 388


>ref|XP_002324630.1| predicted protein [Populus trichocarpa] gi|222866064|gb|EEF03195.1|
            predicted protein [Populus trichocarpa]
          Length = 369

 Score =  246 bits (627), Expect = 1e-62
 Identities = 157/376 (41%), Positives = 220/376 (58%), Gaps = 20/376 (5%)
 Frame = +2

Query: 32   SASVKEDLSELGKTLTRQLWGVASFLAPPP-----STNA--PTISSTEEGDSQTLVGIRN 190
            S SV++DL  +G ++ RQL GVA+FLAPPP     +T A  P    +    SQ L+GIRN
Sbjct: 22   SPSVQDDLLVIGDSIGRQLRGVANFLAPPPPPPPSNTQAAKPQPFDSSSQSSQALLGIRN 81

Query: 191  DFAEXXXXXXXXXXXXXXNKAVNQISRLASNILQFNXXXXXXXXEGLGSGVVGISEEALE 370
            D AE              +   + +S+  SN LQF            G  V GI+EE + 
Sbjct: 82   DLAEIG------------DSLKSGLSKFTSNFLQFKDINSKNSD---GDDVAGINEEVIG 126

Query: 371  FVREISLRPQCWTDFPLALDDIDFDMSSAQREHASTVEHLAPSLADLKMNLCPSNMKEEH 550
            FV+EISLRP+CW DFPL L + DF M+ AQREH   VEH  PSLA L+ NL  S M +  
Sbjct: 127  FVKEISLRPECWIDFPLPLQN-DFRMTDAQREHVLNVEHFVPSLAQLRNNL-RSEMGDGR 184

Query: 551  FWMIYFILLHPRLHKHDVELLSTAQIVETRDILLQTLQKRTNAQLQTS--TADGLSLEVN 724
            FWM+YFILL PRL++HD E+LST QIVETR++LLQ LQ + N ++++S  +  G   E+ 
Sbjct: 185  FWMVYFILLIPRLNEHDFEVLSTPQIVETRNLLLQKLQNKRNVKVESSKNSKSGTQGEIT 244

Query: 725  ENGIDIQEERSSVEEKKVFGKTVIAEDQEDLDVDKWLEEDVETGPSFNSRNQLGNEQDVS 904
             +  +I E   + E  K+           + +  ++ +E ++   S ++  +L +EQDVS
Sbjct: 245  TSQEEITEIADATEGLKI----------NEENSRQFSKEKIDNSTSMDNHKKLEDEQDVS 294

Query: 905  FSDLEDDDND----TSSSNPAKNIHLSSPNESSGWVQLSENS-------KPSQPASQEKD 1051
            FSDLEDDD+D     S+S  A++I   SP+ SS W+QL+E S       K  Q  S++KD
Sbjct: 295  FSDLEDDDSDFSIRLSASRKARSIRAPSPSGSSDWIQLNEGSDTQGGPPKARQSFSRDKD 354

Query: 1052 SESEESNEWLTVDEFD 1099
            S++ ES++W  VDE+D
Sbjct: 355  SDA-ESSDWHKVDEYD 369


>ref|XP_002308058.1| predicted protein [Populus trichocarpa] gi|222854034|gb|EEE91581.1|
            predicted protein [Populus trichocarpa]
          Length = 371

 Score =  234 bits (596), Expect = 5e-59
 Identities = 150/373 (40%), Positives = 215/373 (57%), Gaps = 19/373 (5%)
 Frame = +2

Query: 38   SVKEDLSELGKTLTRQLWGVASFLAPPPSTNAPTISSTEEGDSQT---LVGIRNDFAEXX 208
            SVK+ LS +G ++ RQL GVA+FLAPPP +      S     SQ+   L+GIRND AE  
Sbjct: 24   SVKDHLSAIGVSIGRQLRGVANFLAPPPPSRPEAAKSQPSDSSQSSRALIGIRNDLAEIG 83

Query: 209  XXXXXXXXXXXXNKAVNQISRLASNILQFNXXXXXXXXE--GLGSGVVGISEEALEFVRE 382
                              +S+L  N L+F         +      GV GI+EE + FV+E
Sbjct: 84   DSLKYG------------LSKLTFNFLRFKDDDHNNSSQEGDYEDGVAGINEEVIGFVKE 131

Query: 383  ISLRPQCWTDFPLALDDIDFDMSSAQREHASTVEHLAPSLADLKMNLCPSNMKEEHFWMI 562
            ISLRP+ W DFPL L + DF M+ AQREHAS +E   PSLA L+ NL  S   +  FWM+
Sbjct: 132  ISLRPEYWVDFPLPLQN-DFRMTDAQREHASNIERFVPSLAQLRYNL-RSETGDGRFWMV 189

Query: 563  YFILLHPRLHKHDVELLSTAQIVETRDILLQTLQKRTNAQLQTSTADGLSLEVNENGIDI 742
            YFILL PRL++ D E+LST QIVETR++LL+ L+ + N +L++S          +N I  
Sbjct: 190  YFILLIPRLNEGDFEILSTPQIVETRNVLLEKLRNKKNVKLESS----------KNSISE 239

Query: 743  QEERSSVEEKKVFGKTVIAED---QEDLDVDKWLEEDVETGPSFNSRNQLGNEQDVSFSD 913
             +  ++   ++V G     E     ++ +  ++L+E ++   S ++R +L  ++DVSFSD
Sbjct: 240  TQGENTTSREEVAGIVYATEGLKINDEENSKQFLKEQIDNSISMDNRKKLEGKEDVSFSD 299

Query: 914  LEDDDNDT----SSSNPAKNIHLSSPNESSGWVQLSENS-------KPSQPASQEKDSES 1060
            LEDD +D+    S+S  A++I   SP+ SS WVQL+E+S       K  Q  S++KDS++
Sbjct: 300  LEDDYSDSSTRLSASRKAQSIRAPSPSGSSDWVQLNESSDILGGLCKARQSFSRDKDSDA 359

Query: 1061 EESNEWLTVDEFD 1099
             ES +W  VDEFD
Sbjct: 360  -ESTDWHKVDEFD 371


>ref|XP_003541480.1| PREDICTED: uncharacterized protein LOC100802079 [Glycine max]
          Length = 397

 Score =  226 bits (576), Expect = 1e-56
 Identities = 156/375 (41%), Positives = 206/375 (54%), Gaps = 22/375 (5%)
 Frame = +2

Query: 41   VKEDLSELGKTLTRQLWGVASFLAPPP----STNAPTISSTEEGDS---QTLVGIRNDFA 199
            VK+D+S + +       GVA+FLAPPP    S+++ + SS+  GDS   Q L GIRND  
Sbjct: 38   VKDDISHIFR-------GVANFLAPPPPSSSSSSSSSSSSSSAGDSSSSQALSGIRNDLV 90

Query: 200  EXXXXXXXXXXXXXXNKAVNQISRLASNILQFNXXXXXXXXEGLGSGVVGISEEALEFVR 379
            E              NKAV  IS+LAS +LQ          +     V G +E+ + FV+
Sbjct: 91   EIGGSFKNSLSRISSNKAVTGISKLASQLLQLEPDQQRSNDD---DAVPGTTEDVVRFVK 147

Query: 380  EISLRPQCWTDFPLALDDIDFDMSSAQREHASTVEHLAPSLADLKMNLCPSNMKEEHFWM 559
            EIS RPQCWT+FPL L + DF MS++QREHA  +E L P    L++NLC S M  E FWM
Sbjct: 148  EISARPQCWTEFPLPLHN-DFSMSNSQREHALAIEQLVPEFIALRLNLC-SYMNVEKFWM 205

Query: 560  IYFILLHPRLHKHDVELLSTAQIVETRDILLQTLQKRTNAQLQTSTADGLSLEVNENGID 739
            IYF+L+ PRL++HD E LST +IVE RD+LLQ L +R N Q              E   D
Sbjct: 206  IYFLLILPRLNQHDFERLSTPKIVEARDVLLQKLGERKNLQAGEPENPRTVDTYQEGRED 265

Query: 740  IQEERSSVEEKKVFGKTVIAEDQEDLDVD------KWLEEDVETGPSFNSRNQLGNEQDV 901
               E  S E+ ++   T +    E L+VD      KWLE+      S  S  +L  E+DV
Sbjct: 266  RGTESISFEQNQIL--TEVTNAVEGLEVDDTVSTEKWLEDTDIDASSLASCTKLQQEEDV 323

Query: 902  SFSDLEDD----DNDTSSSNPAKNIHLSSP-NESSGWVQLSENSKPSQPAS----QEKDS 1054
            SFSDLEDD     +  S    A +I  SSP   +S WV+L E+S+          + KDS
Sbjct: 324  SFSDLEDDRSYSSDKLSGYREAHDIRGSSPEGATSDWVRLRESSERDGRKKVIRLKGKDS 383

Query: 1055 ESEESNEWLTVDEFD 1099
            E +ESN+WLTVD+F+
Sbjct: 384  E-DESNDWLTVDDFN 397


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