BLASTX nr result

ID: Coptis24_contig00009298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009298
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW78133.1| solute carrier family 35, member F1 [Zea mays]          73   5e-11
ref|XP_002439879.1| hypothetical protein SORBIDRAFT_09g021870 [S...    73   5e-11
ref|NP_001151187.1| LOC100284820 precursor [Zea mays] gi|1956448...    73   5e-11
gb|ACF82314.1| unknown [Zea mays] gi|413945486|gb|AFW78135.1| hy...    73   5e-11
ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F...    70   2e-10

>gb|AFW78133.1| solute carrier family 35, member F1 [Zea mays]
          Length = 347

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = +1

Query: 1   ISLFAAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDMWAVIIRLFF 144
           ISLFA FA++ FVFYT+ P V+KMSG+ LFNLS LTSDMWAV IR+ F
Sbjct: 226 ISLFAGFAVAIFVFYTVAPFVLKMSGATLFNLSLLTSDMWAVAIRVLF 273


>ref|XP_002439879.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor]
           gi|241945164|gb|EES18309.1| hypothetical protein
           SORBIDRAFT_09g021870 [Sorghum bicolor]
          Length = 347

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = +1

Query: 1   ISLFAAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDMWAVIIRLFF 144
           ISLFA FA++ F+FYTI P V+KMSG+ LFNLS LTSDMWAV IR+ F
Sbjct: 226 ISLFAGFAVAIFIFYTITPFVLKMSGATLFNLSLLTSDMWAVAIRVLF 273


>ref|NP_001151187.1| LOC100284820 precursor [Zea mays] gi|195644886|gb|ACG41911.1|
           solute carrier family 35, member F1 [Zea mays]
          Length = 347

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = +1

Query: 1   ISLFAAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDMWAVIIRLFF 144
           ISLFA FA++ FVFYT+ P V+KMSG+ LFNLS LTSDMWAV IR+ F
Sbjct: 226 ISLFAGFAVAIFVFYTVAPFVLKMSGATLFNLSLLTSDMWAVAIRVLF 273


>gb|ACF82314.1| unknown [Zea mays] gi|413945486|gb|AFW78135.1| hypothetical protein
           ZEAMMB73_203548 [Zea mays]
          Length = 333

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/48 (70%), Positives = 40/48 (83%)
 Frame = +1

Query: 1   ISLFAAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDMWAVIIRLFF 144
           ISLFA FA++ FVFYT+ P V+KMSG+ LFNLS LTSDMWAV IR+ F
Sbjct: 212 ISLFAGFAVAIFVFYTVAPFVLKMSGATLFNLSLLTSDMWAVAIRVLF 259


>ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]
          Length = 673

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = +1

Query: 10  FAAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDMWAVIIRLFF 144
           F  FALS F+FYT+VP ++K+SG+ +FNLS LTSDMWAV+IR+FF
Sbjct: 567 FVGFALSNFLFYTLVPFLLKISGATMFNLSALTSDMWAVVIRIFF 611



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/44 (56%), Positives = 37/44 (84%)
 Frame = +1

Query: 13  AAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDMWAVIIRLFF 144
           A   LSTF+FYT+VP ++K+SG+ + +LS LTSD+WAV+IR++F
Sbjct: 230 AGHVLSTFLFYTLVPFLLKLSGATMLSLSLLTSDLWAVVIRVYF 273