BLASTX nr result
ID: Coptis24_contig00009288
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009288 (272 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321227.1| predicted protein [Populus trichocarpa] gi|2... 71 1e-10 gb|ABK96653.1| unknown [Populus trichocarpa x Populus deltoides] 71 1e-10 ref|XP_004148949.1| PREDICTED: GPN-loop GTPase 3-like [Cucumis s... 70 1e-10 ref|XP_003532017.1| PREDICTED: GPN-loop GTPase 3-like [Glycine max] 70 2e-10 gb|ACU19552.1| unknown [Glycine max] 70 2e-10 >ref|XP_002321227.1| predicted protein [Populus trichocarpa] gi|222862000|gb|EEE99542.1| predicted protein [Populus trichocarpa] Length = 268 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/39 (84%), Positives = 35/39 (89%) Frame = -1 Query: 272 DLRKESSVQYVLSQIDNCIQYGEDADVKVKDFDLGDDSD 156 DLRKESS+QY+LSQIDNCIQYGEDADVKVKDFD D D Sbjct: 230 DLRKESSIQYILSQIDNCIQYGEDADVKVKDFDPEDIDD 268 >gb|ABK96653.1| unknown [Populus trichocarpa x Populus deltoides] Length = 268 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/39 (84%), Positives = 35/39 (89%) Frame = -1 Query: 272 DLRKESSVQYVLSQIDNCIQYGEDADVKVKDFDLGDDSD 156 DLRKESS+QY+LSQIDNCIQYGEDADVKVKDFD D D Sbjct: 230 DLRKESSIQYILSQIDNCIQYGEDADVKVKDFDPEDIDD 268 >ref|XP_004148949.1| PREDICTED: GPN-loop GTPase 3-like [Cucumis sativus] gi|449524838|ref|XP_004169428.1| PREDICTED: GPN-loop GTPase 3-like [Cucumis sativus] Length = 268 Score = 70.5 bits (171), Expect = 1e-10 Identities = 31/39 (79%), Positives = 36/39 (92%) Frame = -1 Query: 272 DLRKESSVQYVLSQIDNCIQYGEDADVKVKDFDLGDDSD 156 DLRKESS++YVL+QIDNCIQYGEDADVK+KDFD +D D Sbjct: 230 DLRKESSIRYVLAQIDNCIQYGEDADVKIKDFDPDEDDD 268 >ref|XP_003532017.1| PREDICTED: GPN-loop GTPase 3-like [Glycine max] Length = 267 Score = 69.7 bits (169), Expect = 2e-10 Identities = 32/37 (86%), Positives = 34/37 (91%) Frame = -1 Query: 272 DLRKESSVQYVLSQIDNCIQYGEDADVKVKDFDLGDD 162 DLRKE S+QYVL+QIDNCIQYGEDADVKVKDFD DD Sbjct: 230 DLRKEKSIQYVLAQIDNCIQYGEDADVKVKDFDPEDD 266 >gb|ACU19552.1| unknown [Glycine max] Length = 267 Score = 69.7 bits (169), Expect = 2e-10 Identities = 32/37 (86%), Positives = 34/37 (91%) Frame = -1 Query: 272 DLRKESSVQYVLSQIDNCIQYGEDADVKVKDFDLGDD 162 DLRKE S+QYVL+QIDNCIQYGEDADVKVKDFD DD Sbjct: 230 DLRKEKSIQYVLAQIDNCIQYGEDADVKVKDFDPEDD 266