BLASTX nr result
ID: Coptis24_contig00009284
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009284 (754 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADQ43193.1| unknown [Eutrema parvulum] 188 1e-45 gb|ACQ90601.1| putative Myb DNA binding protein [Eutrema halophi... 187 2e-45 ref|XP_002329694.1| predicted protein [Populus trichocarpa] gi|2... 183 4e-44 ref|XP_002273214.2| PREDICTED: uncharacterized protein At4g15970... 182 9e-44 ref|NP_172911.1| putative myb DNA binding protein [Arabidopsis t... 181 2e-43 >gb|ADQ43193.1| unknown [Eutrema parvulum] Length = 395 Score = 188 bits (477), Expect = 1e-45 Identities = 89/147 (60%), Positives = 111/147 (75%) Frame = +3 Query: 312 SSNLVDNIGKSRHWTTQYRLEREELGRVLKKASMDDRTIILTTLNKAWAKPGSVFDLFLE 491 SS++ I S LE +L VL++A+ D T+ILTTLN+AWA PGSV DLF E Sbjct: 73 SSSIFSRIFPSFEAFKSLELEEPKLEDVLRRAATRDNTVILTTLNEAWAAPGSVIDLFFE 132 Query: 492 SFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCFNLTTPGIDFSEDERFMSENYLKLM 671 SF IGEGTS LLNHLVI+A+D A++RC+ +H HCF+L T G+DFS + FM+ +YLK+M Sbjct: 133 SFGIGEGTSTLLNHLVIIALDDKAYSRCRELHKHCFSLETEGVDFSREAYFMTRSYLKMM 192 Query: 672 WRRIDFLRIVLELGYNFVFTDADIMWF 752 WRRIDFLR VLE+GYNFVFTDAD+MWF Sbjct: 193 WRRIDFLRSVLEMGYNFVFTDADVMWF 219 >gb|ACQ90601.1| putative Myb DNA binding protein [Eutrema halophilum] Length = 397 Score = 187 bits (476), Expect = 2e-45 Identities = 95/172 (55%), Positives = 122/172 (70%), Gaps = 3/172 (1%) Frame = +3 Query: 246 FKVSKTFSVFTLVFLACLLFYL---SSNLVDNIGKSRHWTTQYRLEREELGRVLKKASMD 416 F V+ + S F L A L + SS+++ I S +E +L VL++A+ Sbjct: 49 FLVAISISCFVLYRSAESLHVVPGSSSSIISRIFPSLDSFKSLEIEEPKLEDVLRRAATR 108 Query: 417 DRTIILTTLNKAWAKPGSVFDLFLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHC 596 D T+ILTTLN+AWA PGSV DLF ESF IGEGTS LLNHLVI+A+D A++RC+ +H HC Sbjct: 109 DGTVILTTLNEAWAAPGSVIDLFFESFGIGEGTSMLLNHLVIIALDAKAYSRCRELHKHC 168 Query: 597 FNLTTPGIDFSEDERFMSENYLKLMWRRIDFLRIVLELGYNFVFTDADIMWF 752 F+L T G+DFS + FM+ +YLK+MWRRIDFLR VLE+GYNFVFTDAD+MWF Sbjct: 169 FSLETEGVDFSGEAYFMTRSYLKMMWRRIDFLRSVLEMGYNFVFTDADVMWF 220 >ref|XP_002329694.1| predicted protein [Populus trichocarpa] gi|222870602|gb|EEF07733.1| predicted protein [Populus trichocarpa] Length = 357 Score = 183 bits (464), Expect = 4e-44 Identities = 91/166 (54%), Positives = 120/166 (72%), Gaps = 12/166 (7%) Frame = +3 Query: 288 LACLLFYLSSNLV------------DNIGKSRHWTTQYRLEREELGRVLKKASMDDRTII 431 ++CL+ Y S+N D++ H T + +++ E LGRVL KASM T+I Sbjct: 37 VSCLVLYKSANPFEFPPSSLGSSDSDSLSVLYHQTYKRKVDLE-LGRVLNKASMKGNTVI 95 Query: 432 LTTLNKAWAKPGSVFDLFLESFRIGEGTSRLLNHLVIVAVDPTAFTRCKSIHPHCFNLTT 611 LTTLN AWA+PGS+FDLFLESF+IGE T LLN+LVI+++D A RC +IHPHC+ L T Sbjct: 96 LTTLNDAWAEPGSIFDLFLESFQIGEKTKELLNNLVIISLDQKAHARCLAIHPHCYALKT 155 Query: 612 PGIDFSEDERFMSENYLKLMWRRIDFLRIVLELGYNFVFTDADIMW 749 G++F+ + FMSE+YLK+MWRRI+FL VLE+GY+FVFTDADIMW Sbjct: 156 EGLNFTREASFMSEDYLKMMWRRIEFLNTVLEMGYSFVFTDADIMW 201 >ref|XP_002273214.2| PREDICTED: uncharacterized protein At4g15970 [Vitis vinifera] Length = 415 Score = 182 bits (461), Expect = 9e-44 Identities = 85/127 (66%), Positives = 101/127 (79%) Frame = +3 Query: 372 EREELGRVLKKASMDDRTIILTTLNKAWAKPGSVFDLFLESFRIGEGTSRLLNHLVIVAV 551 E L RVLK A+M+D T+ILTTLN+AWA P SV DLFLESFRIG+ T R LNHLVI+A+ Sbjct: 115 EELRLERVLKDAAMEDHTVILTTLNEAWAAPDSVIDLFLESFRIGDHTRRYLNHLVIIAL 174 Query: 552 DPTAFTRCKSIHPHCFNLTTPGIDFSEDERFMSENYLKLMWRRIDFLRIVLELGYNFVFT 731 D AF RC +H HCF L T G+DFS + FM+ +YLK+MWRRIDFLR VLE+GYNF+F+ Sbjct: 175 DQKAFARCLILHNHCFTLVTEGVDFSGEAYFMTSDYLKMMWRRIDFLRSVLEMGYNFIFS 234 Query: 732 DADIMWF 752 DADIMWF Sbjct: 235 DADIMWF 241 >ref|NP_172911.1| putative myb DNA binding protein [Arabidopsis thaliana] gi|7527728|gb|AAF63177.1|AC010657_13 T5E21.9 [Arabidopsis thaliana] gi|332191067|gb|AEE29188.1| putative myb DNA binding protein [Arabidopsis thaliana] Length = 386 Score = 181 bits (458), Expect = 2e-43 Identities = 83/127 (65%), Positives = 102/127 (80%) Frame = +3 Query: 372 EREELGRVLKKASMDDRTIILTTLNKAWAKPGSVFDLFLESFRIGEGTSRLLNHLVIVAV 551 E +L VL KA+ DRT++LTTLN AWA PGSV DLF ESFRIGE TS++L+HLVIVA+ Sbjct: 81 EEPKLEDVLSKAATRDRTVVLTTLNAAWAAPGSVIDLFFESFRIGEETSQILDHLVIVAL 140 Query: 552 DPTAFTRCKSIHPHCFNLTTPGIDFSEDERFMSENYLKLMWRRIDFLRIVLELGYNFVFT 731 D A++RC +H HCF+L T G+DFS + FM+ +YLK+MWRRID LR VLE+GYNFVFT Sbjct: 141 DAKAYSRCLELHKHCFSLVTEGVDFSREAYFMTRSYLKMMWRRIDLLRSVLEMGYNFVFT 200 Query: 732 DADIMWF 752 DAD+MWF Sbjct: 201 DADVMWF 207