BLASTX nr result

ID: Coptis24_contig00009283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009283
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD09019.1| regulatory protein-like [Oryza sativa Japonica G...   125   4e-27
gb|EEE69047.1| hypothetical protein OsJ_28045 [Oryza sativa Japo...   125   4e-27
gb|EEC83930.1| hypothetical protein OsI_30008 [Oryza sativa Indi...   125   4e-27
ref|XP_002329694.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
gb|ADQ43193.1| unknown [Eutrema parvulum]                             120   1e-25

>dbj|BAD09019.1| regulatory protein-like [Oryza sativa Japonica Group]
           gi|42407980|dbj|BAD09118.1| regulatory protein-like
           [Oryza sativa Japonica Group]
          Length = 335

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/94 (59%), Positives = 77/94 (81%), Gaps = 2/94 (2%)
 Frame = +3

Query: 183 ELGRVLKNASMDDRTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAMDPT 362
           EL  VL+NASMDDRT+I+T++N+A+A PGS+LDL LESFR+GEGT  LL H++IVAMDP 
Sbjct: 55  ELTEVLRNASMDDRTVIMTSINRAYAAPGSLLDLFLESFRLGEGTEPLLKHVLIVAMDPA 114

Query: 363 AFTRCKAIHPHCFYLTTP--GIDFSEDERFMSEN 458
           A  RC+ +HPHC+ L  P   +D+S+++RFMS++
Sbjct: 115 ALARCRQVHPHCYLLRRPEGAVDYSDEKRFMSKD 148


>gb|EEE69047.1| hypothetical protein OsJ_28045 [Oryza sativa Japonica Group]
          Length = 352

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/94 (59%), Positives = 77/94 (81%), Gaps = 2/94 (2%)
 Frame = +3

Query: 183 ELGRVLKNASMDDRTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAMDPT 362
           EL  VL+NASMDDRT+I+T++N+A+A PGS+LDL LESFR+GEGT  LL H++IVAMDP 
Sbjct: 63  ELTEVLRNASMDDRTVIMTSINRAYAAPGSLLDLFLESFRLGEGTEPLLKHVLIVAMDPA 122

Query: 363 AFTRCKAIHPHCFYLTTP--GIDFSEDERFMSEN 458
           A  RC+ +HPHC+ L  P   +D+S+++RFMS++
Sbjct: 123 ALARCRQVHPHCYLLRRPEGAVDYSDEKRFMSKD 156


>gb|EEC83930.1| hypothetical protein OsI_30008 [Oryza sativa Indica Group]
          Length = 343

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/94 (59%), Positives = 77/94 (81%), Gaps = 2/94 (2%)
 Frame = +3

Query: 183 ELGRVLKNASMDDRTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAMDPT 362
           EL  VL+NASMDDRT+I+T++N+A+A PGS+LDL LESFR+GEGT  LL H++IVAMDP 
Sbjct: 63  ELTEVLRNASMDDRTVIMTSINRAYAAPGSLLDLFLESFRLGEGTEPLLKHVLIVAMDPA 122

Query: 363 AFTRCKAIHPHCFYLTTP--GIDFSEDERFMSEN 458
           A  RC+ +HPHC+ L  P   +D+S+++RFMS++
Sbjct: 123 ALARCRQVHPHCYLLQRPEGAVDYSDEKRFMSKD 156


>ref|XP_002329694.1| predicted protein [Populus trichocarpa] gi|222870602|gb|EEF07733.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/92 (61%), Positives = 70/92 (76%)
 Frame = +3

Query: 183 ELGRVLKNASMDDRTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIVAMDPT 362
           ELGRVL  ASM   T+ILTTLN AWAEPGS+ DL LESF+IGE T  LLN+LVI+++D  
Sbjct: 79  ELGRVLNKASMKGNTVILTTLNDAWAEPGSIFDLFLESFQIGEKTKELLNNLVIISLDQK 138

Query: 363 AFTRCKAIHPHCFYLTTPGIDFSEDERFMSEN 458
           A  RC AIHPHC+ L T G++F+ +  FMSE+
Sbjct: 139 AHARCLAIHPHCYALKTEGLNFTREASFMSED 170


>gb|ADQ43193.1| unknown [Eutrema parvulum]
          Length = 395

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/97 (56%), Positives = 73/97 (75%)
 Frame = +3

Query: 168 QLEREELGRVLKNASMDDRTIILTTLNKAWAEPGSMLDLLLESFRIGEGTSRLLNHLVIV 347
           +LE  +L  VL+ A+  D T+ILTTLN+AWA PGS++DL  ESF IGEGTS LLNHLVI+
Sbjct: 91  ELEEPKLEDVLRRAATRDNTVILTTLNEAWAAPGSVIDLFFESFGIGEGTSTLLNHLVII 150

Query: 348 AMDPTAFTRCKAIHPHCFYLTTPGIDFSEDERFMSEN 458
           A+D  A++RC+ +H HCF L T G+DFS +  FM+ +
Sbjct: 151 ALDDKAYSRCRELHKHCFSLETEGVDFSREAYFMTRS 187


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