BLASTX nr result

ID: Coptis24_contig00009275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009275
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262...    69   3e-10
emb|CBI20741.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262...    69   3e-10
emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera]    69   3e-10
ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|22354...    65   4e-09

>ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262753 isoform 1 [Vitis
           vinifera]
          Length = 551

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   NVRLRESLYCVKSAEENGLNTKS-NRLVRVNDTENSCLPVGLREDNKHSNRTQQAQL--S 172
           NVRL ESLY VK+  ENG+     NRL+  +  ENSCLP G+ E+ K S  T+   L  S
Sbjct: 138 NVRLSESLYYVKNVGENGVRMDELNRLIGFSGAENSCLPAGMFENAKQSVMTEDPHLWFS 197

Query: 173 GKESGTRADWVLSVKSIYVDSEISICTRSEI 265
           G+ES    D  LS  S+++DS+IS   R+++
Sbjct: 198 GRESKRSVDSTLSGHSMFIDSDISAELRNKV 228


>emb|CBI20741.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   NVRLRESLYCVKSAEENGLNTKS-NRLVRVNDTENSCLPVGLREDNKHSNRTQQAQL--S 172
           NVRL ESLY VK+  ENG+     NRL+  +  ENSCLP G+ E+ K S  T+   L  S
Sbjct: 50  NVRLSESLYYVKNVGENGVRMDELNRLIGFSGAENSCLPAGMFENAKQSVMTEDPHLWFS 109

Query: 173 GKESGTRADWVLSVKSIYVDSEISICTRSEI 265
           G+ES    D  LS  S+++DS+IS   R+++
Sbjct: 110 GRESKRSVDSTLSGHSMFIDSDISAELRNKV 140


>ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262753 isoform 2 [Vitis
           vinifera]
          Length = 546

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   NVRLRESLYCVKSAEENGLNTKS-NRLVRVNDTENSCLPVGLREDNKHSNRTQQAQL--S 172
           NVRL ESLY VK+  ENG+     NRL+  +  ENSCLP G+ E+ K S  T+   L  S
Sbjct: 133 NVRLSESLYYVKNVGENGVRMDELNRLIGFSGAENSCLPAGMFENAKQSVMTEDPHLWFS 192

Query: 173 GKESGTRADWVLSVKSIYVDSEISICTRSEI 265
           G+ES    D  LS  S+++DS+IS   R+++
Sbjct: 193 GRESKRSVDSTLSGHSMFIDSDISAELRNKV 223


>emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera]
          Length = 565

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   NVRLRESLYCVKSAEENGLNTKS-NRLVRVNDTENSCLPVGLREDNKHSNRTQQAQL--S 172
           NVRL ESLY VK+  ENG+     NRL+  +  ENSCLP G+ E+ K S  T+   L  S
Sbjct: 152 NVRLSESLYYVKNVGENGVRMDELNRLIGFSGAENSCLPAGMFENAKQSVMTEDPHLWFS 211

Query: 173 GKESGTRADWVLSVKSIYVDSEISICTRSEI 265
           G+ES    D  LS  S+++DS+IS   R+++
Sbjct: 212 GRESKRSVDSTLSGHSMFIDSDISAELRNKV 242


>ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|223544647|gb|EEF46163.1|
           topbp1, putative [Ricinus communis]
          Length = 556

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   NVRLRESLYCVKSAEENGLNTKS-NRLVRVNDTENSCLPVGLREDNK-HSNRTQQAQLSG 175
           NVRL ESLY VKS  E  +     NRLV +N TENSCLPVG+ +  K  +      +LS 
Sbjct: 145 NVRLSESLYSVKSVGETDVRLDDLNRLVGINGTENSCLPVGINDAKKFDAIEGLHKRLSA 204

Query: 176 KESGTRADWVLSVKSIYVDSEISICTRSEI 265
           + S    D  LS  S+++DSEIS   R+++
Sbjct: 205 RSSNRNIDSTLSGSSMFIDSEISDELRNKV 234


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