BLASTX nr result
ID: Coptis24_contig00009275
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009275 (522 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262... 69 3e-10 emb|CBI20741.3| unnamed protein product [Vitis vinifera] 69 3e-10 ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262... 69 3e-10 emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera] 69 3e-10 ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|22354... 65 4e-09 >ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262753 isoform 1 [Vitis vinifera] Length = 551 Score = 69.3 bits (168), Expect = 3e-10 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%) Frame = +2 Query: 2 NVRLRESLYCVKSAEENGLNTKS-NRLVRVNDTENSCLPVGLREDNKHSNRTQQAQL--S 172 NVRL ESLY VK+ ENG+ NRL+ + ENSCLP G+ E+ K S T+ L S Sbjct: 138 NVRLSESLYYVKNVGENGVRMDELNRLIGFSGAENSCLPAGMFENAKQSVMTEDPHLWFS 197 Query: 173 GKESGTRADWVLSVKSIYVDSEISICTRSEI 265 G+ES D LS S+++DS+IS R+++ Sbjct: 198 GRESKRSVDSTLSGHSMFIDSDISAELRNKV 228 >emb|CBI20741.3| unnamed protein product [Vitis vinifera] Length = 463 Score = 69.3 bits (168), Expect = 3e-10 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%) Frame = +2 Query: 2 NVRLRESLYCVKSAEENGLNTKS-NRLVRVNDTENSCLPVGLREDNKHSNRTQQAQL--S 172 NVRL ESLY VK+ ENG+ NRL+ + ENSCLP G+ E+ K S T+ L S Sbjct: 50 NVRLSESLYYVKNVGENGVRMDELNRLIGFSGAENSCLPAGMFENAKQSVMTEDPHLWFS 109 Query: 173 GKESGTRADWVLSVKSIYVDSEISICTRSEI 265 G+ES D LS S+++DS+IS R+++ Sbjct: 110 GRESKRSVDSTLSGHSMFIDSDISAELRNKV 140 >ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262753 isoform 2 [Vitis vinifera] Length = 546 Score = 69.3 bits (168), Expect = 3e-10 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%) Frame = +2 Query: 2 NVRLRESLYCVKSAEENGLNTKS-NRLVRVNDTENSCLPVGLREDNKHSNRTQQAQL--S 172 NVRL ESLY VK+ ENG+ NRL+ + ENSCLP G+ E+ K S T+ L S Sbjct: 133 NVRLSESLYYVKNVGENGVRMDELNRLIGFSGAENSCLPAGMFENAKQSVMTEDPHLWFS 192 Query: 173 GKESGTRADWVLSVKSIYVDSEISICTRSEI 265 G+ES D LS S+++DS+IS R+++ Sbjct: 193 GRESKRSVDSTLSGHSMFIDSDISAELRNKV 223 >emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera] Length = 565 Score = 69.3 bits (168), Expect = 3e-10 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%) Frame = +2 Query: 2 NVRLRESLYCVKSAEENGLNTKS-NRLVRVNDTENSCLPVGLREDNKHSNRTQQAQL--S 172 NVRL ESLY VK+ ENG+ NRL+ + ENSCLP G+ E+ K S T+ L S Sbjct: 152 NVRLSESLYYVKNVGENGVRMDELNRLIGFSGAENSCLPAGMFENAKQSVMTEDPHLWFS 211 Query: 173 GKESGTRADWVLSVKSIYVDSEISICTRSEI 265 G+ES D LS S+++DS+IS R+++ Sbjct: 212 GRESKRSVDSTLSGHSMFIDSDISAELRNKV 242 >ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|223544647|gb|EEF46163.1| topbp1, putative [Ricinus communis] Length = 556 Score = 65.5 bits (158), Expect = 4e-09 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 2/90 (2%) Frame = +2 Query: 2 NVRLRESLYCVKSAEENGLNTKS-NRLVRVNDTENSCLPVGLREDNK-HSNRTQQAQLSG 175 NVRL ESLY VKS E + NRLV +N TENSCLPVG+ + K + +LS Sbjct: 145 NVRLSESLYSVKSVGETDVRLDDLNRLVGINGTENSCLPVGINDAKKFDAIEGLHKRLSA 204 Query: 176 KESGTRADWVLSVKSIYVDSEISICTRSEI 265 + S D LS S+++DSEIS R+++ Sbjct: 205 RSSNRNIDSTLSGSSMFIDSEISDELRNKV 234