BLASTX nr result

ID: Coptis24_contig00009273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009273
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305530.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002313698.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_003555210.1| PREDICTED: uncharacterized protein LOC100807...    67   1e-09
ref|XP_003535757.1| PREDICTED: uncharacterized protein LOC100801...    67   2e-09
tpg|DAA64280.1| TPA: hypothetical protein ZEAMMB73_247144 [Zea m...    64   1e-08

>ref|XP_002305530.1| predicted protein [Populus trichocarpa] gi|222848494|gb|EEE86041.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/53 (67%), Positives = 38/53 (71%)
 Frame = -2

Query: 193 MVGTMLLAVSLWISEFMIKNDLFADYGGMDLGSHSLTLGRLYAWEKKLCEEVK 35
           +V + L   S W      KNDLF DYGGMD GSHSLTLGRLYAWEKKL EEVK
Sbjct: 303 LVASSLKGSSTWTE---YKNDLFDDYGGMDSGSHSLTLGRLYAWEKKLYEEVK 352


>ref|XP_002313698.1| predicted protein [Populus trichocarpa] gi|222850106|gb|EEE87653.1|
           predicted protein [Populus trichocarpa]
          Length = 706

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = -2

Query: 139 KNDLFADYGGMDLGSHSLTLGRLYAWEKKLCEEVK 35
           KNDLF DYGGMD GSHSLTLGRLYAWEKKL EEVK
Sbjct: 317 KNDLFDDYGGMDSGSHSLTLGRLYAWEKKLYEEVK 351


>ref|XP_003555210.1| PREDICTED: uncharacterized protein LOC100807897 [Glycine max]
          Length = 771

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/44 (75%), Positives = 34/44 (77%)
 Frame = -2

Query: 166 SLWISEFMIKNDLFADYGGMDLGSHSLTLGRLYAWEKKLCEEVK 35
           S W+     KNDLF DYGGMD GSH LTLGRLYAWEKKL EEVK
Sbjct: 370 STWVE---YKNDLFDDYGGMDSGSHLLTLGRLYAWEKKLFEEVK 410


>ref|XP_003535757.1| PREDICTED: uncharacterized protein LOC100801471 [Glycine max]
          Length = 767

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/35 (88%), Positives = 31/35 (88%)
 Frame = -2

Query: 139 KNDLFADYGGMDLGSHSLTLGRLYAWEKKLCEEVK 35
           KNDLF DYGGMD GSH LTLGRLYAWEKKL EEVK
Sbjct: 371 KNDLFDDYGGMDSGSHLLTLGRLYAWEKKLFEEVK 405


>tpg|DAA64280.1| TPA: hypothetical protein ZEAMMB73_247144 [Zea mays]
          Length = 723

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/43 (67%), Positives = 33/43 (76%)
 Frame = -2

Query: 160 WISEFMIKNDLFADYGGMDLGSHSLTLGRLYAWEKKLCEEVKV 32
           W  +   ++D+F DYGGM  GSHS TLGRLYAWEKKL EEVKV
Sbjct: 328 WTDKSETRSDIFEDYGGMKSGSHSQTLGRLYAWEKKLYEEVKV 370


Top