BLASTX nr result

ID: Coptis24_contig00009268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009268
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40860.3| unnamed protein product [Vitis vinifera]              150   2e-34
ref|XP_002317247.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
gb|AFK40448.1| unknown [Lotus japonicus]                              147   1e-33
emb|CAH67654.1| H0410G08.9 [Oryza sativa Indica Group]                147   1e-33
ref|NP_001054010.1| Os04g0635700 [Oryza sativa Japonica Group] g...   147   1e-33

>emb|CBI40860.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  150 bits (378), Expect = 2e-34
 Identities = 76/95 (80%), Positives = 85/95 (89%), Gaps = 3/95 (3%)
 Frame = +3

Query: 3   VSQGEGNN---ERKSFLSLEEAGLVDMSGLSTHERFLCRLTISSLNLLKVISEQESFPIE 173
           VS GEG+    ER+SFL+LEEAGLV+MSGLSTHERFLCRLTISSLNLL+VI+EQE   IE
Sbjct: 133 VSSGEGDEKRTERRSFLTLEEAGLVEMSGLSTHERFLCRLTISSLNLLRVIAEQEGCSIE 192

Query: 174 ELNAGRVTDWFVKDKLKREQNLDSAVLQWDDSNFQ 278
           ELNAG+V DWFVKDKLKREQNL+SAVL+WDDS FQ
Sbjct: 193 ELNAGKVCDWFVKDKLKREQNLESAVLKWDDSEFQ 227


>ref|XP_002317247.1| predicted protein [Populus trichocarpa] gi|222860312|gb|EEE97859.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score =  150 bits (378), Expect = 2e-34
 Identities = 73/90 (81%), Positives = 82/90 (91%)
 Frame = +3

Query: 9   QGEGNNERKSFLSLEEAGLVDMSGLSTHERFLCRLTISSLNLLKVISEQESFPIEELNAG 188
           + E N+ER+SFLSLEEAGLV+MSG+STHERFLCRLTISSLNLL+VISEQE   IEELNAG
Sbjct: 1   ESEKNSERRSFLSLEEAGLVEMSGISTHERFLCRLTISSLNLLRVISEQEGCTIEELNAG 60

Query: 189 RVTDWFVKDKLKREQNLDSAVLQWDDSNFQ 278
           RV DWF+KDKLKREQN++SAVLQWDDS  Q
Sbjct: 61  RVCDWFLKDKLKREQNIESAVLQWDDSELQ 90


>gb|AFK40448.1| unknown [Lotus japonicus]
          Length = 138

 Score =  147 bits (372), Expect = 1e-33
 Identities = 71/89 (79%), Positives = 82/89 (92%)
 Frame = +3

Query: 6   SQGEGNNERKSFLSLEEAGLVDMSGLSTHERFLCRLTISSLNLLKVISEQESFPIEELNA 185
           S+GE   +R++FL+LEEAGLV++SGLSTHERFLCRLTISSLNLL+VISEQE   IEELNA
Sbjct: 47  SEGERKGDRRTFLTLEEAGLVEISGLSTHERFLCRLTISSLNLLRVISEQEGCSIEELNA 106

Query: 186 GRVTDWFVKDKLKREQNLDSAVLQWDDSN 272
           G+V DWF+KDKLKREQN+DSAVLQWDDSN
Sbjct: 107 GKVCDWFLKDKLKREQNIDSAVLQWDDSN 135


>emb|CAH67654.1| H0410G08.9 [Oryza sativa Indica Group]
          Length = 163

 Score =  147 bits (372), Expect = 1e-33
 Identities = 72/88 (81%), Positives = 79/88 (89%)
 Frame = +3

Query: 12  GEGNNERKSFLSLEEAGLVDMSGLSTHERFLCRLTISSLNLLKVISEQESFPIEELNAGR 191
           G+G  E+++FLSLEEAGLV+MSGLSTHERFLCRLTISSLNLL+VISEQE  PIEELNAG 
Sbjct: 76  GDGEQEQRTFLSLEEAGLVEMSGLSTHERFLCRLTISSLNLLRVISEQEGVPIEELNAGL 135

Query: 192 VTDWFVKDKLKREQNLDSAVLQWDDSNF 275
           V DWFVKDKLKREQN+ SAVLQWDD  F
Sbjct: 136 VCDWFVKDKLKREQNVGSAVLQWDDPGF 163


>ref|NP_001054010.1| Os04g0635700 [Oryza sativa Japonica Group]
           gi|38344806|emb|CAE03007.2| OSJNBa0043L09.26 [Oryza
           sativa Japonica Group] gi|113565581|dbj|BAF15924.1|
           Os04g0635700 [Oryza sativa Japonica Group]
           gi|125549888|gb|EAY95710.1| hypothetical protein
           OsI_17578 [Oryza sativa Indica Group]
           gi|125591767|gb|EAZ32117.1| hypothetical protein
           OsJ_16313 [Oryza sativa Japonica Group]
           gi|215692772|dbj|BAG88200.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215704375|dbj|BAG93809.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 163

 Score =  147 bits (372), Expect = 1e-33
 Identities = 72/88 (81%), Positives = 79/88 (89%)
 Frame = +3

Query: 12  GEGNNERKSFLSLEEAGLVDMSGLSTHERFLCRLTISSLNLLKVISEQESFPIEELNAGR 191
           G+G  E+++FLSLEEAGLV+MSGLSTHERFLCRLTISSLNLL+VISEQE  PIEELNAG 
Sbjct: 76  GDGEQEQRTFLSLEEAGLVEMSGLSTHERFLCRLTISSLNLLRVISEQEGVPIEELNAGL 135

Query: 192 VTDWFVKDKLKREQNLDSAVLQWDDSNF 275
           V DWFVKDKLKREQN+ SAVLQWDD  F
Sbjct: 136 VCDWFVKDKLKREQNVGSAVLQWDDPGF 163